RNA–Protein interactions for RNA: ENST00000368019.5

USF1-201, Transcript of upstream transcription factor 1, humanhuman

TSL 5 BASIC

Gene USF1, Length 998 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-201ENST00000368019 GIPP09681 153 aaPredicted RBP10.56□□□□□ -0.72
USF1-201ENST00000368019 UCHL1P09936 223 aa10.56□□□□□ -0.72
USF1-201ENST00000368019 ZGLP1P0C6A0 271 aa10.56□□□□□ -0.72
USF1-201ENST00000368019 SLC35G4P0C7Q5 338 aa10.56□□□□□ -0.72
USF1-201ENST00000368019 PRR23D2P0DMB1 279 aaPredicted RBP10.56□□□□□ -0.72
USF1-201ENST00000368019 LIPCP11150 499 aa10.56□□□□□ -0.72
USF1-201ENST00000368019 NT5EP21589 574 aa10.56□□□□□ -0.72
USF1-201ENST00000368019 ZP3P21754 424 aa10.56□□□□□ -0.72
USF1-201ENST00000368019 LCN1P31025 176 aa10.56□□□□□ -0.72
USF1-201ENST00000368019 GPR4P46093 362 aa10.56□□□□□ -0.72
USF1-201ENST00000368019 RAB28P51157 221 aa10.56□□□□□ -0.72
USF1-201ENST00000368019 CCR9P51686 369 aa10.56□□□□□ -0.72
USF1-201ENST00000368019 ZNF136P52737 540 aa10.56□□□□□ -0.72
USF1-201ENST00000368019 EEF1A1P68104 462 aaKnown RBP10.56□□□□□ -0.72
USF1-201ENST00000368019 PUDPQ08623 228 aa10.56□□□□□ -0.72
USF1-201ENST00000368019 GGTLC2Q14390 218 aa10.56□□□□□ -0.72
USF1-201ENST00000368019 KRT33BQ14525 404 aa10.56□□□□□ -0.72
USF1-201ENST00000368019 C14orf28Q4W4Y0 310 aa10.56□□□□□ -0.72
USF1-201ENST00000368019 MFSD12Q6NUT3 480 aa10.56□□□□□ -0.72
USF1-201ENST00000368019 FAM180BQ6P0A1 224 aa10.56□□□□□ -0.72
USF1-201ENST00000368019 PLBD1Q6P4A8 553 aa10.56□□□□□ -0.72
USF1-201ENST00000368019 ZCCHC12Q6PEW1 402 aa10.56□□□□□ -0.72
USF1-201ENST00000368019 UNQ9370/PRO34162Q6UXP9 181 aa10.56□□□□□ -0.72
USF1-201ENST00000368019 ZNF836Q6ZNA1 936 aa10.56□□□□□ -0.72
USF1-201ENST00000368019 CEACAM19Q7Z692 300 aa10.56□□□□□ -0.72
USF1-201ENST00000368019 DTX1Q86Y01 620 aa10.56□□□□□ -0.72
USF1-201ENST00000368019 OR8H3Q8N146 312 aa10.56□□□□□ -0.72
USF1-201ENST00000368019 PIAS4Q8N2W9 510 aaPredicted RBP10.56□□□□□ -0.72
USF1-201ENST00000368019 TMEM99Q8N816 258 aa10.56□□□□□ -0.72
USF1-201ENST00000368019 AMER3Q8N944 861 aa10.56□□□□□ -0.72
USF1-201ENST00000368019 ACOT4Q8N9L9 421 aa10.56□□□□□ -0.72
USF1-201ENST00000368019 POMGNT2Q8NAT1 580 aa10.56□□□□□ -0.72
USF1-201ENST00000368019 ZNF527Q8NB42 609 aa10.56□□□□□ -0.72
USF1-201ENST00000368019 MFSD9Q8NBP5 474 aa10.56□□□□□ -0.72
USF1-201ENST00000368019 BBS1Q8NFJ9 593 aa10.56□□□□□ -0.72
USF1-201ENST00000368019 OR11H4Q8NGC9 324 aa10.56□□□□□ -0.72
USF1-201ENST00000368019 OR2A1Q8NGT9 310 aa10.56□□□□□ -0.72
USF1-201ENST00000368019 CCL4L1Q8NHW4 92 aa10.56□□□□□ -0.72
USF1-201ENST00000368019 RPS4Y2Q8TD47 263 aa10.56□□□□□ -0.72
USF1-201ENST00000368019 OMA1Q96E52 524 aa10.56□□□□□ -0.72
USF1-201ENST00000368019 ACAT2Q9BWD1 397 aa10.56□□□□□ -0.72
USF1-201ENST00000368019 LGR4Q9BXB1 951 aa10.56□□□□□ -0.72
USF1-201ENST00000368019 ZNF436Q9C0F3 470 aaPredicted RBP10.56□□□□□ -0.72
USF1-201ENST00000368019 B3GNT4Q9C0J1 378 aa10.56□□□□□ -0.72
USF1-201ENST00000368019 PPA2Q9H2U2 334 aa10.56□□□□□ -0.72
USF1-201ENST00000368019 ISG20L2Q9H9L3 353 aaKnown RBP10.56□□□□□ -0.72
USF1-201ENST00000368019 NPDC1Q9NQX5 325 aaPredicted RBP10.56□□□□□ -0.72
USF1-201ENST00000368019 SIDT1Q9NXL6 827 aaKnown RBP10.56□□□□□ -0.72
USF1-201ENST00000368019 PISDQ9UG56 409 aa10.56□□□□□ -0.72
USF1-201ENST00000368019 IL20RAQ9UHF4 553 aa10.56□□□□□ -0.72
USF1-201ENST00000368019 ST6GALNAC2Q9UJ37 374 aa10.56□□□□□ -0.72
USF1-201ENST00000368019 PLAGL1Q9UM63 463 aa10.56□□□□□ -0.72
USF1-201ENST00000368019 LOXL2Q9Y4K0 774 aa10.56□□□□□ -0.72
USF1-201ENST00000368019 ZNF780BQ9Y6R6 833 aa10.56□□□□□ -0.72
USF1-201ENST00000368019 MDC1Q14676 2089 aaKnown RBP10.55□□□□□ -0.72
USF1-201ENST00000368019 FEZF1A0PJY2 475 aa10.55□□□□□ -0.72
USF1-201ENST00000368019 RIIAD1A6NNX1 92 aa10.55□□□□□ -0.72
USF1-201ENST00000368019 SNRPGP15A8MWD9 76 aa10.55□□□□□ -0.72
USF1-201ENST00000368019 C9orf172C9J069 976 aa10.55□□□□□ -0.72
USF1-201ENST00000368019 GABARAPH6UMI1 98 aa10.55□□□□□ -0.72
USF1-201ENST00000368019 PYCARD-AS1I3L0S3 204 aa10.55□□□□□ -0.72
USF1-201ENST00000368019 PRICKLE3O43900 615 aaPredicted RBP10.55□□□□□ -0.72
USF1-201ENST00000368019 LCMT2O60294 686 aaKnown RBP10.55□□□□□ -0.72
USF1-201ENST00000368019 LYPD3O95274 346 aa10.55□□□□□ -0.72
USF1-201ENST00000368019 WISP1O95388 367 aa10.55□□□□□ -0.72
USF1-201ENST00000368019 CH25HO95992 272 aa10.55□□□□□ -0.72
USF1-201ENST00000368019 IFNGP01579 166 aa10.55□□□□□ -0.72
USF1-201ENST00000368019 IFNA16P05015 189 aa10.55□□□□□ -0.72
USF1-201ENST00000368019 ITGB2P05107 769 aa10.55□□□□□ -0.72
USF1-201ENST00000368019 DBIP07108 87 aaKnown RBP10.55□□□□□ -0.72
USF1-201ENST00000368019 JMJD7P0C870 316 aa10.55□□□□□ -0.72
USF1-201ENST00000368019 EPXP11678 715 aa10.55□□□□□ -0.72
USF1-201ENST00000368019 ZNF3P17036 446 aa10.55□□□□□ -0.72
USF1-201ENST00000368019 CTRB1P17538 263 aa10.55□□□□□ -0.72
USF1-201ENST00000368019 WT1P19544 449 aaPredicted RBP10.55□□□□□ -0.72
USF1-201ENST00000368019 TBXA2RP21731 343 aa10.55□□□□□ -0.72
USF1-201ENST00000368019 GIFP27352 417 aa10.55□□□□□ -0.72
USF1-201ENST00000368019 CALCRP30988 508 aa10.55□□□□□ -0.72
USF1-201ENST00000368019 GBX2P52951 348 aaPredicted RBP10.55□□□□□ -0.72
USF1-201ENST00000368019 PRKAG1P54619 331 aa10.55□□□□□ -0.72
USF1-201ENST00000368019 SCAND1P57086 179 aa10.55□□□□□ -0.72
USF1-201ENST00000368019 RAP2BP61225 183 aa10.55□□□□□ -0.72
USF1-201ENST00000368019 STXBP1P61764 594 aaKnown RBP10.55□□□□□ -0.72
USF1-201ENST00000368019 ZNF85Q03923 595 aa10.55□□□□□ -0.72
USF1-201ENST00000368019 ZSWIM7Q19AV6 140 aa10.55□□□□□ -0.72
USF1-201ENST00000368019 ACSM3Q53FZ2 586 aa10.55□□□□□ -0.72
USF1-201ENST00000368019 CTRB2Q6GPI1 263 aa10.55□□□□□ -0.72
USF1-201ENST00000368019 ARHGAP11AQ6P4F7 1023 aa10.55□□□□□ -0.72
USF1-201ENST00000368019 ZNF613Q6PF04 617 aa10.55□□□□□ -0.72
USF1-201ENST00000368019 ARL9Q6T311 187 aa10.55□□□□□ -0.72
USF1-201ENST00000368019 USP53Q70EK8 1073 aa10.55□□□□□ -0.72
USF1-201ENST00000368019 KRT74Q7RTS7 529 aa10.55□□□□□ -0.72
USF1-201ENST00000368019 OVCH2Q7RTZ1 564 aa10.55□□□□□ -0.72
USF1-201ENST00000368019 PRSS42Q7Z5A4 293 aa10.55□□□□□ -0.72
USF1-201ENST00000368019 TAF8Q7Z7C8 310 aa10.55□□□□□ -0.72
USF1-201ENST00000368019 FAM20CQ8IXL6 584 aa10.55□□□□□ -0.72
USF1-201ENST00000368019 TIGD4Q8IY51 512 aa10.55□□□□□ -0.72
USF1-201ENST00000368019 CDK20Q8IZL9 346 aa10.55□□□□□ -0.72
USF1-201ENST00000368019 ZNF619Q8N2I2 560 aa10.55□□□□□ -0.72
USF1-201ENST00000368019 LMNTD1Q8N9Z9 388 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms