RNA–Protein interactions for RNA: ENST00000366766.6

CDC42BPA-203, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5 BASIC

Gene CDC42BPA, Length 10,610 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-203ENST00000366766 HBE1P02100 147 aa11.16□□□□□ -0.62
CDC42BPA-203ENST00000366766 SMIM18P0DKX4 95 aa11.16□□□□□ -0.62
CDC42BPA-203ENST00000366766 THAP3Q8WTV1 239 aaPredicted RBP11.16□□□□□ -0.62
CDC42BPA-203ENST00000366766 GIMAP1Q8WWP7 306 aa11.16□□□□□ -0.62
CDC42BPA-203ENST00000366766 EGLN3Q9H6Z9 239 aa11.16□□□□□ -0.62
CDC42BPA-203ENST00000366766 ACTL7AQ9Y615 435 aa11.16□□□□□ -0.62
CDC42BPA-203ENST00000366766 RIN1Q13671 783 aa11.16□□□□□ -0.62
CDC42BPA-203ENST00000366766 OR52I1Q8NGK6 324 aa11.16□□□□□ -0.62
CDC42BPA-203ENST00000366766 SLC6A18Q96N87 628 aa11.16□□□□□ -0.62
CDC42BPA-203ENST00000366766 KCNIP2Q9NS61 270 aa11.16□□□□□ -0.62
CDC42BPA-203ENST00000366766 SNRNP200O75643 2136 aaKnown RBP11.16□□□□□ -0.62
CDC42BPA-203ENST00000366766 GREB1LQ9C091 1923 aaPredicted RBP11.16□□□□□ -0.62
CDC42BPA-203ENST00000366766 ZDBF2Q9HCK1 2354 aa11.16□□□□□ -0.62
CDC42BPA-203ENST00000366766 A8MVM7 634 aa11.16□□□□□ -0.62
CDC42BPA-203ENST00000366766 CYB5BO43169 146 aa11.16□□□□□ -0.62
CDC42BPA-203ENST00000366766 CSNK1G2P78368 415 aa11.16□□□□□ -0.62
CDC42BPA-203ENST00000366766 FOXK2Q01167 660 aa11.16□□□□□ -0.62
CDC42BPA-203ENST00000366766 MIB2Q96AX9 1013 aa11.16□□□□□ -0.62
CDC42BPA-203ENST00000366766 RAB22AQ9UL26 194 aa11.16□□□□□ -0.62
CDC42BPA-203ENST00000366766 SPDEFO95238 335 aa11.16□□□□□ -0.62
CDC42BPA-203ENST00000366766 CALCBP10092 127 aa11.16□□□□□ -0.62
CDC42BPA-203ENST00000366766 IDO2Q6ZQW0 420 aa11.16□□□□□ -0.62
CDC42BPA-203ENST00000366766 OR1J2Q8NGS2 313 aa11.16□□□□□ -0.62
CDC42BPA-203ENST00000366766 OR51Q1Q8NH59 317 aa11.16□□□□□ -0.62
CDC42BPA-203ENST00000366766 ABHD4Q8TB40 342 aa11.16□□□□□ -0.62
CDC42BPA-203ENST00000366766 ZNF334Q9HCZ1 680 aaPredicted RBP11.16□□□□□ -0.62
CDC42BPA-203ENST00000366766 PRDM9Q9NQV7 894 aa11.16□□□□□ -0.62
CDC42BPA-203ENST00000366766 ASF1BQ9NVP2 202 aa11.16□□□□□ -0.62
CDC42BPA-203ENST00000366766 ALDOBP05062 364 aa11.16□□□□□ -0.62
CDC42BPA-203ENST00000366766 OVCH1Q7RTY7 1134 aa11.16□□□□□ -0.62
CDC42BPA-203ENST00000366766 PPP1R3BQ86XI6 285 aa11.16□□□□□ -0.62
CDC42BPA-203ENST00000366766 FTSJ1Q9UET6 329 aa11.16□□□□□ -0.62
CDC42BPA-203ENST00000366766 LHX6Q9UPM6 363 aa11.16□□□□□ -0.62
CDC42BPA-203ENST00000366766 CHD5Q8TDI0 1954 aa11.16□□□□□ -0.62
CDC42BPA-203ENST00000366766 CHRM2P08172 466 aa11.16□□□□□ -0.62
CDC42BPA-203ENST00000366766 NAGAP17050 411 aa11.16□□□□□ -0.62
CDC42BPA-203ENST00000366766 VASPP50552 380 aaPredicted RBP11.16□□□□□ -0.62
CDC42BPA-203ENST00000366766 AFF3P51826 1226 aaKnown RBP11.16□□□□□ -0.62
CDC42BPA-203ENST00000366766 OR7A5Q15622 319 aa11.16□□□□□ -0.62
CDC42BPA-203ENST00000366766 SMN1Q16637 294 aaKnown RBP11.16□□□□□ -0.62
CDC42BPA-203ENST00000366766 LFNGQ8NES3 379 aa11.16□□□□□ -0.62
CDC42BPA-203ENST00000366766 TUBB1Q9H4B7 451 aa11.16□□□□□ -0.62
CDC42BPA-203ENST00000366766 GHRLQ9UBU3 117 aa11.16□□□□□ -0.62
CDC42BPA-203ENST00000366766 ANK1P16157 1881 aa11.15□□□□□ -0.62
CDC42BPA-203ENST00000366766 GALEQ14376 348 aa11.15□□□□□ -0.62
CDC42BPA-203ENST00000366766 NKPD1Q17RQ9 610 aa11.15□□□□□ -0.62
CDC42BPA-203ENST00000366766 GDF7Q7Z4P5 450 aa11.15□□□□□ -0.62
CDC42BPA-203ENST00000366766 MSLNLQ96KJ4 702 aa11.15□□□□□ -0.62
CDC42BPA-203ENST00000366766 INSM2Q96T92 566 aaPredicted RBP11.15□□□□□ -0.62
CDC42BPA-203ENST00000366766 GLCEO94923 617 aa11.15□□□□□ -0.62
CDC42BPA-203ENST00000366766 CHATP28329 748 aa11.15□□□□□ -0.62
CDC42BPA-203ENST00000366766 POU3F1Q03052 451 aaPredicted RBP11.15□□□□□ -0.62
CDC42BPA-203ENST00000366766 VASNQ6EMK4 673 aa11.15□□□□□ -0.62
CDC42BPA-203ENST00000366766 HMGN2P46Q86SG4 172 aa11.15□□□□□ -0.62
CDC42BPA-203ENST00000366766 IL17RDQ8NFM7 739 aa11.15□□□□□ -0.62
CDC42BPA-203ENST00000366766 CPT1CQ8TCG5 803 aa11.15□□□□□ -0.62
CDC42BPA-203ENST00000366766 LINC00615Q96LM1 132 aaPredicted RBP11.15□□□□□ -0.62
CDC42BPA-203ENST00000366766 MED18Q9BUE0 208 aa11.15□□□□□ -0.62
CDC42BPA-203ENST00000366766 LIN7BQ9HAP6 207 aa11.15□□□□□ -0.62
CDC42BPA-203ENST00000366766 WASH6PQ9NQA3 447 aa11.15□□□□□ -0.62
CDC42BPA-203ENST00000366766 DNMT3BQ9UBC3 853 aaKnown RBP11.15□□□□□ -0.62
CDC42BPA-203ENST00000366766 TP53TG5Q9Y2B4 290 aa11.15□□□□□ -0.62
CDC42BPA-203ENST00000366766 NUDT7P0C024 238 aa11.15□□□□□ -0.62
CDC42BPA-203ENST00000366766 HMGA1P17096 107 aaKnown RBP11.15□□□□□ -0.62
CDC42BPA-203ENST00000366766 OXA1LQ15070 435 aa11.15□□□□□ -0.62
CDC42BPA-203ENST00000366766 MKXQ8IYA7 352 aa11.15□□□□□ -0.62
CDC42BPA-203ENST00000366766 NANOGP1Q8N7R0 232 aa11.15□□□□□ -0.62
CDC42BPA-203ENST00000366766 MALSU1Q96EH3 234 aa11.15□□□□□ -0.62
CDC42BPA-203ENST00000366766 BIN3Q9NQY0 253 aa11.15□□□□□ -0.62
CDC42BPA-203ENST00000366766 ZNF226Q9NYT6 803 aa11.15□□□□□ -0.62
CDC42BPA-203ENST00000366766 DOCK4Q8N1I0 1966 aa11.15□□□□□ -0.62
CDC42BPA-203ENST00000366766 A8MXE2 369 aa11.15□□□□□ -0.62
CDC42BPA-203ENST00000366766 ZNF254O75437 659 aa11.15□□□□□ -0.62
CDC42BPA-203ENST00000366766 VAMP5O95183 116 aa11.15□□□□□ -0.62
CDC42BPA-203ENST00000366766 SRMP19623 302 aa11.15□□□□□ -0.62
CDC42BPA-203ENST00000366766 SSTR4P31391 388 aa11.15□□□□□ -0.62
CDC42BPA-203ENST00000366766 C1orf61Q13536 156 aa11.15□□□□□ -0.62
CDC42BPA-203ENST00000366766 EXOSC7Q15024 291 aaKnown RBP11.15□□□□□ -0.62
CDC42BPA-203ENST00000366766 GLYATL2Q8WU03 294 aa11.15□□□□□ -0.62
CDC42BPA-203ENST00000366766 SORBS1Q9BX66 1292 aaKnown RBP11.15□□□□□ -0.62
CDC42BPA-203ENST00000366766 SNX11Q9Y5W9 270 aa11.15□□□□□ -0.62
CDC42BPA-203ENST00000366766 THSD7AQ9UPZ6 1657 aa11.15□□□□□ -0.62
CDC42BPA-203ENST00000366766 TSPAN11A1L157 253 aa11.15□□□□□ -0.62
CDC42BPA-203ENST00000366766 CSO75390 466 aaKnown RBP11.15□□□□□ -0.62
CDC42BPA-203ENST00000366766 HTR3BO95264 441 aa11.15□□□□□ -0.62
CDC42BPA-203ENST00000366766 PIGAP37287 484 aa11.15□□□□□ -0.62
CDC42BPA-203ENST00000366766 MC2RQ01718 297 aa11.15□□□□□ -0.62
CDC42BPA-203ENST00000366766 ELAVL1Q15717 326 aaKnown RBP11.15□□□□□ -0.62
CDC42BPA-203ENST00000366766 GPR155Q7Z3F1 870 aa11.15□□□□□ -0.62
CDC42BPA-203ENST00000366766 ASB12Q8WXK4 309 aa11.15□□□□□ -0.62
CDC42BPA-203ENST00000366766 MVB12AQ96EY5 273 aa11.15□□□□□ -0.62
CDC42BPA-203ENST00000366766 STEAP1Q9UHE8 339 aa11.15□□□□□ -0.62
CDC42BPA-203ENST00000366766 hCG_1807616A0A1W2PRN6 198 aa11.15□□□□□ -0.62
CDC42BPA-203ENST00000366766 I6L893 689 aaPredicted RBP11.15□□□□□ -0.62
CDC42BPA-203ENST00000366766 NKX2-5P52952 324 aaPredicted RBP11.15□□□□□ -0.62
CDC42BPA-203ENST00000366766 MRPL58Q14197 206 aaKnown RBP11.15□□□□□ -0.62
CDC42BPA-203ENST00000366766 LYSMD2Q8IV50 215 aa11.15□□□□□ -0.62
CDC42BPA-203ENST00000366766 OR1S1Q8NH92 325 aa11.15□□□□□ -0.62
CDC42BPA-203ENST00000366766 LGALS14Q8TCE9 139 aa11.15□□□□□ -0.62
CDC42BPA-203ENST00000366766 SLC38A1Q9H2H9 487 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms