RNA–Protein interactions for RNA: ENST00000364739.1

RNU4-28P-201, Transcript of RNA, U4 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU4-28P, Length 141 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-28P-201ENST00000364739 CCDC65Q8IXS2 484 aa2.35□□□□□ -2.03
RNU4-28P-201ENST00000364739 FAM86B1Q8N7N1 296 aa2.35□□□□□ -2.03
RNU4-28P-201ENST00000364739 FADS6Q8N9I5 356 aa2.35□□□□□ -2.03
RNU4-28P-201ENST00000364739 OR10G9Q8NGN4 311 aa2.35□□□□□ -2.03
RNU4-28P-201ENST00000364739 OR1F12Q8NHA8 337 aa2.35□□□□□ -2.03
RNU4-28P-201ENST00000364739 BMFQ96LC9 184 aa2.35□□□□□ -2.03
RNU4-28P-201ENST00000364739 SECISBP2Q96T21 854 aaKnown RBP2.35□□□□□ -2.03
RNU4-28P-201ENST00000364739 NPAS2Q99743 824 aa2.35□□□□□ -2.03
RNU4-28P-201ENST00000364739 SPIN2AQ99865 258 aa2.35□□□□□ -2.03
RNU4-28P-201ENST00000364739 SPIN2BQ9BPZ2 258 aa2.35□□□□□ -2.03
RNU4-28P-201ENST00000364739 RIOK1Q9BRS2 568 aaKnown RBP2.35□□□□□ -2.03
RNU4-28P-201ENST00000364739 ZNF2Q9BSG1 426 aaPredicted RBP2.35□□□□□ -2.03
RNU4-28P-201ENST00000364739 ACTR3BQ9P1U1 418 aa2.35□□□□□ -2.03
RNU4-28P-201ENST00000364739 ZNF629Q9UEG4 869 aaPredicted RBP2.35□□□□□ -2.03
RNU4-28P-201ENST00000364739 COPS3Q9UNS2 423 aa2.35□□□□□ -2.03
RNU4-28P-201ENST00000364739 MEMO1Q9Y316 297 aa2.35□□□□□ -2.03
RNU4-28P-201ENST00000364739 IGSF9BQ9UPX0 1349 aa2.35□□□□□ -2.03
RNU4-28P-201ENST00000364739 IQANK1A0A1B0GTG1 560 aa2.34□□□□□ -2.03
RNU4-28P-201ENST00000364739 C12orf77C9JDV5 145 aa2.34□□□□□ -2.03
RNU4-28P-201ENST00000364739 MAPK13O15264 365 aa2.34□□□□□ -2.03
RNU4-28P-201ENST00000364739 IGHG4P01861 327 aa2.34□□□□□ -2.03
RNU4-28P-201ENST00000364739 CA8P35219 290 aa2.34□□□□□ -2.03
RNU4-28P-201ENST00000364739 RDXP35241 583 aaKnown RBP2.34□□□□□ -2.03
RNU4-28P-201ENST00000364739 DDOSTP39656 456 aa2.34□□□□□ -2.03
RNU4-28P-201ENST00000364739 ENPEPQ07075 957 aa2.34□□□□□ -2.03
RNU4-28P-201ENST00000364739 SMARCB1Q12824 385 aa2.34□□□□□ -2.03
RNU4-28P-201ENST00000364739 CARD16Q5EG05 197 aa2.34□□□□□ -2.03
RNU4-28P-201ENST00000364739 Q5W150 140 aa2.34□□□□□ -2.03
RNU4-28P-201ENST00000364739 HSDL2Q6YN16 418 aa2.34□□□□□ -2.03
RNU4-28P-201ENST00000364739 PGAP1Q75T13 922 aa2.34□□□□□ -2.03
RNU4-28P-201ENST00000364739 NLRP9Q7RTR0 991 aa2.34□□□□□ -2.03
RNU4-28P-201ENST00000364739 ZNF573Q86YE8 665 aa2.34□□□□□ -2.03
RNU4-28P-201ENST00000364739 LRRC58Q96CX6 371 aa2.34□□□□□ -2.03
RNU4-28P-201ENST00000364739 ZNF578Q96N58 590 aaPredicted RBP2.34□□□□□ -2.03
RNU4-28P-201ENST00000364739 ZNF641Q96N77 438 aaPredicted RBP2.34□□□□□ -2.03
RNU4-28P-201ENST00000364739 CAPS2Q9BXY5 557 aa2.34□□□□□ -2.03
RNU4-28P-201ENST00000364739 KCNIP1Q9NZI2 227 aa2.34□□□□□ -2.03
RNU4-28P-201ENST00000364739 ODF2LQ9ULJ1 636 aa2.34□□□□□ -2.03
RNU4-28P-201ENST00000364739 RPL36Q9Y3U8 105 aaKnown RBP2.34□□□□□ -2.03
RNU4-28P-201ENST00000364739 COL27A1Q8IZC6 1860 aaPredicted RBP2.33□□□□□ -2.04
RNU4-28P-201ENST00000364739 PLAC8L1A1L4L8 177 aa2.33□□□□□ -2.04
RNU4-28P-201ENST00000364739 LOC110117498-PIK3R3F6TDL0 507 aa2.33□□□□□ -2.04
RNU4-28P-201ENST00000364739 BTN3A3O00478 584 aa2.33□□□□□ -2.04
RNU4-28P-201ENST00000364739 CLDN3O15551 220 aa2.33□□□□□ -2.04
RNU4-28P-201ENST00000364739 BCAS1O75363 584 aaPredicted RBP2.33□□□□□ -2.04
RNU4-28P-201ENST00000364739 IGLV3-19P01714 112 aa2.33□□□□□ -2.04
RNU4-28P-201ENST00000364739 POU2F1P14859 743 aa2.33□□□□□ -2.04
RNU4-28P-201ENST00000364739 HPGDP15428 266 aa2.33□□□□□ -2.04
RNU4-28P-201ENST00000364739 PGAM1P18669 254 aa2.33□□□□□ -2.04
RNU4-28P-201ENST00000364739 HMGB2P26583 209 aaKnown RBP2.33□□□□□ -2.04
RNU4-28P-201ENST00000364739 UBE2AP49459 152 aa2.33□□□□□ -2.04
RNU4-28P-201ENST00000364739 ACVR1Q04771 509 aa2.33□□□□□ -2.04
RNU4-28P-201ENST00000364739 C1orf61Q13536 156 aa2.33□□□□□ -2.04
RNU4-28P-201ENST00000364739 FZD2Q14332 565 aa2.33□□□□□ -2.04
RNU4-28P-201ENST00000364739 CYTH1Q15438 398 aa2.33□□□□□ -2.04
RNU4-28P-201ENST00000364739 C10orf120Q5SQS8 335 aa2.33□□□□□ -2.04
RNU4-28P-201ENST00000364739 ZNF546Q86UE3 836 aa2.33□□□□□ -2.04
RNU4-28P-201ENST00000364739 SLC35F2Q8IXU6 374 aa2.33□□□□□ -2.04
RNU4-28P-201ENST00000364739 PGAM4Q8N0Y7 254 aa2.33□□□□□ -2.04
RNU4-28P-201ENST00000364739 TM4SF19Q96DZ7 209 aa2.33□□□□□ -2.04
RNU4-28P-201ENST00000364739 C7orf34Q96L11 122 aa2.33□□□□□ -2.04
RNU4-28P-201ENST00000364739 RNF2Q99496 336 aa2.33□□□□□ -2.04
RNU4-28P-201ENST00000364739 REEP4Q9H6H4 257 aa2.33□□□□□ -2.04
RNU4-28P-201ENST00000364739 COQ10BQ9H8M1 238 aa2.33□□□□□ -2.04
RNU4-28P-201ENST00000364739 SLC40A1Q9NP59 571 aa2.33□□□□□ -2.04
RNU4-28P-201ENST00000364739 RAB18Q9NP72 206 aa2.33□□□□□ -2.04
RNU4-28P-201ENST00000364739 ZNF222Q9UK12 451 aa2.33□□□□□ -2.04
RNU4-28P-201ENST00000364739 OR10H1Q9Y4A9 318 aa2.33□□□□□ -2.04
RNU4-28P-201ENST00000364739 WIF1Q9Y5W5 379 aa2.33□□□□□ -2.04
RNU4-28P-201ENST00000364739 F11RQ9Y624 299 aaKnown RBP2.33□□□□□ -2.04
RNU4-28P-201ENST00000364739 U3KQV3 271 aa2.33□□□□□ -2.04
RNU4-28P-201ENST00000364739 IGLV2-18A0A075B6J9 118 aa2.32□□□□□ -2.04
RNU4-28P-201ENST00000364739 C12orf71A8MTZ7 269 aa2.32□□□□□ -2.04
RNU4-28P-201ENST00000364739 OXSR1O95747 527 aaPredicted RBP2.32□□□□□ -2.04
RNU4-28P-201ENST00000364739 ALDOBP05062 364 aa2.32□□□□□ -2.04
RNU4-28P-201ENST00000364739 ZNF30P17039 623 aa2.32□□□□□ -2.04
RNU4-28P-201ENST00000364739 IMPDH1P20839 514 aa2.32□□□□□ -2.04
RNU4-28P-201ENST00000364739 HMGCS1Q01581 520 aa2.32□□□□□ -2.04
RNU4-28P-201ENST00000364739 SELPLGQ14242 412 aa2.32□□□□□ -2.04
RNU4-28P-201ENST00000364739 OXA1LQ15070 435 aa2.32□□□□□ -2.04
RNU4-28P-201ENST00000364739 SGCAQ16586 387 aa2.32□□□□□ -2.04
RNU4-28P-201ENST00000364739 KPRPQ5T749 579 aaPredicted RBP2.32□□□□□ -2.04
RNU4-28P-201ENST00000364739 OR10T2Q8NGX3 314 aa2.32□□□□□ -2.04
RNU4-28P-201ENST00000364739 ACTRT1Q8TDG2 376 aa2.32□□□□□ -2.04
RNU4-28P-201ENST00000364739 ACOT11Q8WXI4 607 aaPredicted RBP2.32□□□□□ -2.04
RNU4-28P-201ENST00000364739 CTNNBL1Q8WYA6 563 aaPredicted RBP2.32□□□□□ -2.04
RNU4-28P-201ENST00000364739 OXGR1Q96P68 337 aa2.32□□□□□ -2.04
RNU4-28P-201ENST00000364739 NDFIP1Q9BT67 221 aa2.32□□□□□ -2.04
RNU4-28P-201ENST00000364739 RIOK2Q9BVS4 552 aaKnown RBP2.32□□□□□ -2.04
RNU4-28P-201ENST00000364739 ZDHHC4Q9NPG8 344 aa2.32□□□□□ -2.04
RNU4-28P-201ENST00000364739 SIRT7Q9NRC8 400 aa2.32□□□□□ -2.04
RNU4-28P-201ENST00000364739 TCRBV9S1A1TA0A576 114 aa2.31□□□□□ -2.04
RNU4-28P-201ENST00000364739 PRSS37A4D1T9 235 aa2.31□□□□□ -2.04
RNU4-28P-201ENST00000364739 PEX7O00628 323 aa2.31□□□□□ -2.04
RNU4-28P-201ENST00000364739 SLC31A2O15432 143 aa2.31□□□□□ -2.04
RNU4-28P-201ENST00000364739 B4GALT5O43286 388 aa2.31□□□□□ -2.04
RNU4-28P-201ENST00000364739 RBBP9O75884 186 aa2.31□□□□□ -2.04
RNU4-28P-201ENST00000364739 PNMTP11086 282 aa2.31□□□□□ -2.04
RNU4-28P-201ENST00000364739 EPB41P11171 864 aaKnown RBP2.31□□□□□ -2.04
RNU4-28P-201ENST00000364739 MUC1P15941 1255 aaPredicted RBP2.31□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms