RNA–Protein interactions for RNA: ENST00000361909.8

CMTM3-201, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMTM3, Length 2,159 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-201ENST00000361909 POMGNT2Q8NAT1 580 aa17.48■□□□□ 0.39
CMTM3-201ENST00000361909 OR13C5Q8NGS8 318 aa17.48■□□□□ 0.39
CMTM3-201ENST00000361909 ZDHHC5Q9C0B5 715 aa17.48■□□□□ 0.39
CMTM3-201ENST00000361909 MFFQ9GZY8 342 aa17.48■□□□□ 0.39
CMTM3-201ENST00000361909 OR52A5Q9H2C5 316 aa17.48■□□□□ 0.39
CMTM3-201ENST00000361909 PIGMQ9H3S5 423 aa17.48■□□□□ 0.39
CMTM3-201ENST00000361909 C14orf105Q9NVL8 296 aa17.48■□□□□ 0.39
CMTM3-201ENST00000361909 EPHA6Q9UF33 1036 aa17.48■□□□□ 0.39
CMTM3-201ENST00000361909 SLC7A7Q9UM01 511 aa17.48■□□□□ 0.39
CMTM3-201ENST00000361909 FOXJ3Q9UPW0 622 aa17.48■□□□□ 0.39
CMTM3-201ENST00000361909 MRPS17Q9Y2R5 130 aaKnown RBP17.48■□□□□ 0.39
CMTM3-201ENST00000361909 DUXAA6NLW8 204 aa17.47■□□□□ 0.39
CMTM3-201ENST00000361909 NTN1O95631 604 aa17.47■□□□□ 0.39
CMTM3-201ENST00000361909 RPN2P04844 631 aa17.47■□□□□ 0.39
CMTM3-201ENST00000361909 ZNF35P13682 527 aa17.47■□□□□ 0.39
CMTM3-201ENST00000361909 IL9P15248 144 aa17.47■□□□□ 0.39
CMTM3-201ENST00000361909 FXYD6P3P58550 94 aa17.47■□□□□ 0.39
CMTM3-201ENST00000361909 UBE3DQ7Z6J8 389 aa17.47■□□□□ 0.39
CMTM3-201ENST00000361909 KRT77Q7Z794 578 aa17.47■□□□□ 0.39
CMTM3-201ENST00000361909 OR10K1Q8NGX5 313 aa17.47■□□□□ 0.39
CMTM3-201ENST00000361909 HAVCR1Q96D42 359 aa17.47■□□□□ 0.39
CMTM3-201ENST00000361909 APOOQ9BUR5 198 aa17.47■□□□□ 0.39
CMTM3-201ENST00000361909 COA4Q9NYJ1 87 aa17.47■□□□□ 0.39
CMTM3-201ENST00000361909 TAS2R3Q9NYW6 316 aa17.47■□□□□ 0.39
CMTM3-201ENST00000361909 TAC3Q9UHF0 121 aa17.47■□□□□ 0.39
CMTM3-201ENST00000361909 PCYT1BQ9Y5K3 369 aaPredicted RBP17.47■□□□□ 0.39
CMTM3-201ENST00000361909 NUMA1Q14980 2115 aa17.47■□□□□ 0.39
CMTM3-201ENST00000361909 RFPL4AA6NLU0 287 aa17.47■□□□□ 0.39
CMTM3-201ENST00000361909 FAM25EA8MYX2 175 aa17.47■□□□□ 0.39
CMTM3-201ENST00000361909 C10orf142B7Z368 130 aa17.47■□□□□ 0.39
CMTM3-201ENST00000361909 RFPL4AL1F8VTS6 287 aa17.47■□□□□ 0.39
CMTM3-201ENST00000361909 NAT2P11245 290 aa17.47■□□□□ 0.39
CMTM3-201ENST00000361909 SDHBP21912 280 aa17.47■□□□□ 0.39
CMTM3-201ENST00000361909 SLC16A1P53985 500 aa17.47■□□□□ 0.39
CMTM3-201ENST00000361909 H2BFSP57053 126 aa17.47■□□□□ 0.39
CMTM3-201ENST00000361909 SCAND1P57086 179 aa17.47■□□□□ 0.39
CMTM3-201ENST00000361909 STXBP1P61764 594 aaKnown RBP17.47■□□□□ 0.39
CMTM3-201ENST00000361909 RPS11P62280 158 aaKnown RBP eCLIP17.47■□□□□ 0.39
CMTM3-201ENST00000361909 NDUFAF6Q330K2 333 aa17.47■□□□□ 0.39
CMTM3-201ENST00000361909 CDK20Q8IZL9 346 aa17.47■□□□□ 0.39
CMTM3-201ENST00000361909 LMNTD1Q8N9Z9 388 aa17.47■□□□□ 0.39
CMTM3-201ENST00000361909 ZFPM2Q8WW38 1151 aa17.47■□□□□ 0.39
CMTM3-201ENST00000361909 C10orf90Q96M02 699 aa17.47■□□□□ 0.39
CMTM3-201ENST00000361909 DPH1Q9BZG8 443 aa17.47■□□□□ 0.39
CMTM3-201ENST00000361909 EQTNQ9NQ60 294 aa17.47■□□□□ 0.39
CMTM3-201ENST00000361909 CPNE7Q9UBL6 633 aa17.47■□□□□ 0.39
CMTM3-201ENST00000361909 KLK11Q9UBX7 282 aa17.47■□□□□ 0.39
CMTM3-201ENST00000361909 IFNGP01579 166 aa17.46■□□□□ 0.39
CMTM3-201ENST00000361909 MRPL3P09001 348 aaKnown RBP17.46■□□□□ 0.39
CMTM3-201ENST00000361909 OR2T7P0C7T2 308 aa17.46■□□□□ 0.39
CMTM3-201ENST00000361909 RAB13P51153 203 aa17.46■□□□□ 0.39
CMTM3-201ENST00000361909 GPR85P60893 370 aa17.46■□□□□ 0.39
CMTM3-201ENST00000361909 SIRPAP78324 504 aa17.46■□□□□ 0.39
CMTM3-201ENST00000361909 MICBQ29980 383 aa17.46■□□□□ 0.39
CMTM3-201ENST00000361909 TSSK4Q6SA08 328 aa17.46■□□□□ 0.39
CMTM3-201ENST00000361909 TMPRSS11FQ6ZWK6 438 aa17.46■□□□□ 0.39
CMTM3-201ENST00000361909 SVBPQ8N300 66 aa17.46■□□□□ 0.39
CMTM3-201ENST00000361909 OR5M1Q8NGP8 315 aa17.46■□□□□ 0.39
CMTM3-201ENST00000361909 OR2T27Q8NH04 317 aa17.46■□□□□ 0.39
CMTM3-201ENST00000361909 C1orf216Q8TAB5 229 aa17.46■□□□□ 0.39
CMTM3-201ENST00000361909 SCARF2Q96GP6 870 aaPredicted RBP17.46■□□□□ 0.39
CMTM3-201ENST00000361909 DMRTA2Q96SC8 542 aa17.46■□□□□ 0.39
CMTM3-201ENST00000361909 TIMM29Q9BSF4 260 aa17.46■□□□□ 0.39
CMTM3-201ENST00000361909 ACTRT3Q9BYD9 372 aa17.46■□□□□ 0.39
CMTM3-201ENST00000361909 OR51V1Q9H2C8 321 aa17.46■□□□□ 0.39
CMTM3-201ENST00000361909 BARX1Q9HBU1 254 aaPredicted RBP17.46■□□□□ 0.39
CMTM3-201ENST00000361909 WNT16Q9UBV4 365 aa17.46■□□□□ 0.39
CMTM3-201ENST00000361909 SLC23A2Q9UGH3 650 aa17.46■□□□□ 0.39
CMTM3-201ENST00000361909 ASF1AQ9Y294 204 aa17.46■□□□□ 0.39
CMTM3-201ENST00000361909 RAB19A4D1S5 217 aa17.46■□□□□ 0.39
CMTM3-201ENST00000361909 SLC31A1O15431 190 aa17.46■□□□□ 0.39
CMTM3-201ENST00000361909 ATG12O94817 140 aa17.46■□□□□ 0.39
CMTM3-201ENST00000361909 SPDEFO95238 335 aa17.46■□□□□ 0.39
CMTM3-201ENST00000361909 SIX6O95475 246 aa17.46■□□□□ 0.39
CMTM3-201ENST00000361909 RLN2P04090 185 aa17.46■□□□□ 0.39
CMTM3-201ENST00000361909 IFNA4P05014 189 aa17.46■□□□□ 0.39
CMTM3-201ENST00000361909 CEACAM5P06731 702 aa17.46■□□□□ 0.39
CMTM3-201ENST00000361909 THBS1P07996 1170 aa17.46■□□□□ 0.39
CMTM3-201ENST00000361909 SRMP19623 302 aa17.46■□□□□ 0.39
CMTM3-201ENST00000361909 CSNK2A2P19784 350 aaPredicted RBP17.46■□□□□ 0.39
CMTM3-201ENST00000361909 AKR1D1P51857 326 aa17.46■□□□□ 0.39
CMTM3-201ENST00000361909 ZNF345Q14585 488 aa17.46■□□□□ 0.39
CMTM3-201ENST00000361909 SLC9A5Q14940 896 aa17.46■□□□□ 0.39
CMTM3-201ENST00000361909 LRRN1Q6UXK5 716 aa17.46■□□□□ 0.39
CMTM3-201ENST00000361909 LINC00469Q8N7U9 141 aa17.46■□□□□ 0.39
CMTM3-201ENST00000361909 OR4C6Q8NH72 309 aa17.46■□□□□ 0.39
CMTM3-201ENST00000361909 HMGB4Q8WW32 186 aa17.46■□□□□ 0.39
CMTM3-201ENST00000361909 PELI1Q96FA3 418 aa17.46■□□□□ 0.39
CMTM3-201ENST00000361909 SHDQ96IW2 340 aa17.46■□□□□ 0.39
CMTM3-201ENST00000361909 IL17FQ96PD4 163 aa17.46■□□□□ 0.39
CMTM3-201ENST00000361909 DERL3Q96Q80 235 aa17.46■□□□□ 0.39
CMTM3-201ENST00000361909 PRSS27Q9BQR3 290 aa17.46■□□□□ 0.39
CMTM3-201ENST00000361909 MTHFD2LQ9H903 347 aaPredicted RBP17.46■□□□□ 0.39
CMTM3-201ENST00000361909 MRTO4Q9UKD2 239 aaKnown RBP17.46■□□□□ 0.39
CMTM3-201ENST00000361909 KCNE3Q9Y6H6 103 aa17.46■□□□□ 0.39
CMTM3-201ENST00000361909 CNR1P21554 472 aa17.45■□□□□ 0.38
CMTM3-201ENST00000361909 STARD6P59095 220 aa17.45■□□□□ 0.38
CMTM3-201ENST00000361909 GGTLC2Q14390 218 aa17.45■□□□□ 0.38
CMTM3-201ENST00000361909 ARHGAP11AQ6P4F7 1023 aa17.45■□□□□ 0.38
CMTM3-201ENST00000361909 Q6ZS52 159 aa17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms