RNA–Protein interactions for RNA: ENST00000360264.7

CUX1-203, Transcript of cut like homeobox 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CUX1, Length 13,762 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-203ENST00000360264 SDC1P18827 310 aa9.01□□□□□ -0.97
CUX1-203ENST00000360264 KCNG3Q8TAE7 436 aa9.01□□□□□ -0.97
CUX1-203ENST00000360264 M1APQ8TC57 530 aa9.01□□□□□ -0.97
CUX1-203ENST00000360264 BSCL2Q96G97 398 aaPredicted RBP9.01□□□□□ -0.97
CUX1-203ENST00000360264 OR6C1Q96RD1 312 aa9.01□□□□□ -0.97
CUX1-203ENST00000360264 ATF6BQ99941 703 aa9.01□□□□□ -0.97
CUX1-203ENST00000360264 MYEF2Q9P2K5 600 aaKnown RBP9.01□□□□□ -0.97
CUX1-203ENST00000360264 TNFRSF10AO00220 468 aa9.01□□□□□ -0.97
CUX1-203ENST00000360264 LCMT2O60294 686 aaKnown RBP9.01□□□□□ -0.97
CUX1-203ENST00000360264 GIFP27352 417 aa9.01□□□□□ -0.97
CUX1-203ENST00000360264 CDK5R2Q13319 367 aa9.01□□□□□ -0.97
CUX1-203ENST00000360264 COX15Q7KZN9 410 aa9.01□□□□□ -0.97
CUX1-203ENST00000360264 M0R3H8 397 aa9.01□□□□□ -0.97
CUX1-203ENST00000360264 NXPH2O95156 264 aa9.01□□□□□ -0.97
CUX1-203ENST00000360264 MT-ATP6P00846 226 aa9.01□□□□□ -0.97
CUX1-203ENST00000360264 ERVK-25P63136 954 aa9.01□□□□□ -0.97
CUX1-203ENST00000360264 SPOCK1Q08629 439 aa9.01□□□□□ -0.97
CUX1-203ENST00000360264 PAGE3Q5JUK9 113 aa9.01□□□□□ -0.97
CUX1-203ENST00000360264 CPNE8Q86YQ8 564 aa9.01□□□□□ -0.97
CUX1-203ENST00000360264 ITFG2Q969R8 447 aa9.01□□□□□ -0.97
CUX1-203ENST00000360264 ATP13A2Q9NQ11 1180 aa9.01□□□□□ -0.97
CUX1-203ENST00000360264 NFS1Q9Y697 457 aa9.01□□□□□ -0.97
CUX1-203ENST00000360264 RAD1O60671 282 aa9.01□□□□□ -0.97
CUX1-203ENST00000360264 DFFBO76075 338 aa9.01□□□□□ -0.97
CUX1-203ENST00000360264 SLC1A3P43003 542 aa9.01□□□□□ -0.97
CUX1-203ENST00000360264 ZNF133P52736 654 aaPredicted RBP9.01□□□□□ -0.97
CUX1-203ENST00000360264 CEACAM7Q14002 265 aa9.01□□□□□ -0.97
CUX1-203ENST00000360264 MLF2Q15773 248 aaPredicted RBP9.01□□□□□ -0.97
CUX1-203ENST00000360264 LRP10Q7Z4F1 713 aa9.01□□□□□ -0.97
CUX1-203ENST00000360264 ZNF546Q86UE3 836 aa9.01□□□□□ -0.97
CUX1-203ENST00000360264 GJC3Q8NFK1 279 aa9.01□□□□□ -0.97
CUX1-203ENST00000360264 IL1F10Q8WWZ1 152 aa9.01□□□□□ -0.97
CUX1-203ENST00000360264 KLF16Q9BXK1 252 aaPredicted RBP9.01□□□□□ -0.97
CUX1-203ENST00000360264 THSD1Q9NS62 852 aa9.01□□□□□ -0.97
CUX1-203ENST00000360264 KIAA1456Q9P272 454 aa9.01□□□□□ -0.97
CUX1-203ENST00000360264 NUDT7P0C024 238 aa9.01□□□□□ -0.97
CUX1-203ENST00000360264 LCN6P62502 163 aa9.01□□□□□ -0.97
CUX1-203ENST00000360264 ACSM3Q53FZ2 586 aa9.01□□□□□ -0.97
CUX1-203ENST00000360264 ASB11Q8WXH4 323 aa9.01□□□□□ -0.97
CUX1-203ENST00000360264 C5AR2Q9P296 337 aa9.01□□□□□ -0.97
CUX1-203ENST00000360264 PCDHGA1Q9Y5H4 931 aa9.01□□□□□ -0.97
CUX1-203ENST00000360264 SCRG1O75711 98 aa9.01□□□□□ -0.97
CUX1-203ENST00000360264 GPR75O95800 540 aa9.01□□□□□ -0.97
CUX1-203ENST00000360264 TMEM41BQ5BJD5 291 aa9.01□□□□□ -0.97
CUX1-203ENST00000360264 NPSR1Q6W5P4 371 aa9.01□□□□□ -0.97
CUX1-203ENST00000360264 OR51L1Q8NGJ5 315 aa9.01□□□□□ -0.97
CUX1-203ENST00000360264 TUBG2Q9NRH3 451 aa9.01□□□□□ -0.97
CUX1-203ENST00000360264 ENSAO43768 121 aaKnown RBP9.01□□□□□ -0.97
CUX1-203ENST00000360264 ARSAP15289 507 aa9.01□□□□□ -0.97
CUX1-203ENST00000360264 PTPN6P29350 595 aa9.01□□□□□ -0.97
CUX1-203ENST00000360264 HENMT1Q5T8I9 393 aaKnown RBP9.01□□□□□ -0.97
CUX1-203ENST00000360264 SYT13Q7L8C5 426 aa9.01□□□□□ -0.97
CUX1-203ENST00000360264 STACQ99469 402 aa9.01□□□□□ -0.97
CUX1-203ENST00000360264 USP36Q9P275 1121 aaKnown RBP9.01□□□□□ -0.97
CUX1-203ENST00000360264 SIT1Q9Y3P8 196 aa9.01□□□□□ -0.97
CUX1-203ENST00000360264 TRAV27A0A087WT01 109 aa9.01□□□□□ -0.97
CUX1-203ENST00000360264 ZNF593O00488 134 aaPredicted RBP9.01□□□□□ -0.97
CUX1-203ENST00000360264 ANGPTL7O43827 346 aa9.01□□□□□ -0.97
CUX1-203ENST00000360264 VHLLQ6RSH7 139 aa9.01□□□□□ -0.97
CUX1-203ENST00000360264 SLC22A24Q8N4F4 322 aa9.01□□□□□ -0.97
CUX1-203ENST00000360264 RAB3CQ96E17 227 aa9.01□□□□□ -0.97
CUX1-203ENST00000360264 SLC5A10A0PJK1 596 aa9□□□□□ -0.97
CUX1-203ENST00000360264 LDB3O75112 727 aa9□□□□□ -0.97
CUX1-203ENST00000360264 SLC10A2Q12908 348 aaPredicted RBP9□□□□□ -0.97
CUX1-203ENST00000360264 NFATC3Q12968 1075 aa9□□□□□ -0.97
CUX1-203ENST00000360264 TP53I3Q53FA7 332 aa9□□□□□ -0.97
CUX1-203ENST00000360264 FRMD1Q8N878 549 aa9□□□□□ -0.97
CUX1-203ENST00000360264 CYB561A3Q8NBI2 242 aa9□□□□□ -0.97
CUX1-203ENST00000360264 C11orf40Q8WZ69 217 aa9□□□□□ -0.97
CUX1-203ENST00000360264 MOCOSQ96EN8 888 aa9□□□□□ -0.97
CUX1-203ENST00000360264 NRIP3Q9NQ35 241 aa9□□□□□ -0.97
CUX1-203ENST00000360264 HOXD13P35453 343 aa9□□□□□ -0.97
CUX1-203ENST00000360264 TBCEQ15813 527 aaPredicted RBP9□□□□□ -0.97
CUX1-203ENST00000360264 RTL8BQ17RB0 113 aa9□□□□□ -0.97
CUX1-203ENST00000360264 PLK5Q496M5 336 aa9□□□□□ -0.97
CUX1-203ENST00000360264 GDPD3Q7L5L3 318 aa9□□□□□ -0.97
CUX1-203ENST00000360264 OR8J2Q8NGG1 315 aa9□□□□□ -0.97
CUX1-203ENST00000360264 PTERQ96BW5 349 aa9□□□□□ -0.97
CUX1-203ENST00000360264 GIMAP2Q9UG22 337 aa9□□□□□ -0.97
CUX1-203ENST00000360264 PRAMEF4O60810 478 aa9□□□□□ -0.97
CUX1-203ENST00000360264 ABHD16AO95870 558 aa9□□□□□ -0.97
CUX1-203ENST00000360264 FBXW12Q6X9E4 464 aa9□□□□□ -0.97
CUX1-203ENST00000360264 EGLN3Q9H6Z9 239 aa9□□□□□ -0.97
CUX1-203ENST00000360264 ADAM29Q9UKF5 820 aa9□□□□□ -0.97
CUX1-203ENST00000360264 SLC5A2P31639 672 aa9□□□□□ -0.97
CUX1-203ENST00000360264 CXADRP78310 365 aa9□□□□□ -0.97
CUX1-203ENST00000360264 CD163Q86VB7 1156 aa9□□□□□ -0.97
CUX1-203ENST00000360264 BARHL1Q9BZE3 327 aa9□□□□□ -0.97
CUX1-203ENST00000360264 TWSG1Q9GZX9 223 aa9□□□□□ -0.97
CUX1-203ENST00000360264 NPAP1Q9NZP6 1156 aa9□□□□□ -0.97
CUX1-203ENST00000360264 RAB22AQ9UL26 194 aa9□□□□□ -0.97
CUX1-203ENST00000360264 VDAC3Q9Y277 283 aa9□□□□□ -0.97
CUX1-203ENST00000360264 HS3ST3A1Q9Y663 406 aa9□□□□□ -0.97
CUX1-203ENST00000360264 DDX60Q8IY21 1712 aaKnown RBP9□□□□□ -0.97
CUX1-203ENST00000360264 TEX51A0A1B0GUA7 166 aa9□□□□□ -0.97
CUX1-203ENST00000360264 ZNF814B7Z6K7 855 aa9□□□□□ -0.97
CUX1-203ENST00000360264 ABCD4O14678 606 aa9□□□□□ -0.97
CUX1-203ENST00000360264 RPL11P62913 178 aaKnown RBP9□□□□□ -0.97
CUX1-203ENST00000360264 PODNL1Q6PEZ8 512 aa9□□□□□ -0.97
CUX1-203ENST00000360264 SPARTQ8N0X7 666 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms