RNA–Protein interactions for RNA: ENST00000359759.8

COL18A1-203, Transcript of collagen type XVIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL18A1, Length 6,586 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-203ENST00000359759 PHYHD1Q5SRE7 291 aa14.91□□□□□ -0.02
COL18A1-203ENST00000359759 RPL22L1Q6P5R6 122 aaKnown RBP14.91□□□□□ -0.02
COL18A1-203ENST00000359759 ARV1Q9H2C2 271 aa14.91□□□□□ -0.02
COL18A1-203ENST00000359759 A8MVM7 634 aa14.91□□□□□ -0.02
COL18A1-203ENST00000359759 PTHP01270 115 aa14.91□□□□□ -0.02
COL18A1-203ENST00000359759 HNRNPA1P09651 372 aaKnown RBP eCLIP14.91□□□□□ -0.02
COL18A1-203ENST00000359759 LAP3P28838 519 aa14.91□□□□□ -0.02
COL18A1-203ENST00000359759 EIF2DP41214 584 aaKnown RBP14.91□□□□□ -0.02
COL18A1-203ENST00000359759 PM20D1Q6GTS8 502 aa14.91□□□□□ -0.02
COL18A1-203ENST00000359759 OR2T27Q8NH04 317 aa14.91□□□□□ -0.02
COL18A1-203ENST00000359759 RHOXF1Q8NHV9 184 aa14.91□□□□□ -0.02
COL18A1-203ENST00000359759 H1FXQ92522 213 aaKnown RBP14.91□□□□□ -0.02
COL18A1-203ENST00000359759 KATNB1Q9BVA0 655 aa14.91□□□□□ -0.02
COL18A1-203ENST00000359759 EMCNQ9ULC0 261 aa14.91□□□□□ -0.02
COL18A1-203ENST00000359759 VIRMAQ69YN4 1812 aaKnown RBP14.91□□□□□ -0.02
COL18A1-203ENST00000359759 LRP5LA4QPB2 252 aa14.91□□□□□ -0.02
COL18A1-203ENST00000359759 F10P00742 488 aa14.91□□□□□ -0.02
COL18A1-203ENST00000359759 ALDOCP09972 364 aaKnown RBP14.91□□□□□ -0.02
COL18A1-203ENST00000359759 FCER1GP30273 86 aa14.91□□□□□ -0.02
COL18A1-203ENST00000359759 HMGN3Q15651 99 aa14.91□□□□□ -0.02
COL18A1-203ENST00000359759 RPE65Q16518 533 aa14.91□□□□□ -0.02
COL18A1-203ENST00000359759 PRSS45Q7RTY3 260 aa14.91□□□□□ -0.02
COL18A1-203ENST00000359759 SYT9Q86SS6 491 aa14.91□□□□□ -0.02
COL18A1-203ENST00000359759 FAM185AQ8N0U4 392 aa14.91□□□□□ -0.02
COL18A1-203ENST00000359759 OR10R2Q8NGX6 335 aa14.91□□□□□ -0.02
COL18A1-203ENST00000359759 KHSRPQ92945 711 aaKnown RBP eCLIP14.91□□□□□ -0.023e-10■■■■■ 30.4
COL18A1-203ENST00000359759 LURAP1Q96LR2 239 aa14.91□□□□□ -0.02
COL18A1-203ENST00000359759 MYH15Q9Y2K3 1946 aa14.91□□□□□ -0.02
COL18A1-203ENST00000359759 MYH2Q9UKX2 1941 aa14.91□□□□□ -0.02
COL18A1-203ENST00000359759 KCNK5O95279 499 aa14.91□□□□□ -0.02
COL18A1-203ENST00000359759 TMEM200AQ86VY9 491 aa14.91□□□□□ -0.02
COL18A1-203ENST00000359759 C15orf54Q8N8G6 183 aa14.91□□□□□ -0.02
COL18A1-203ENST00000359759 HAVCR2Q8TDQ0 301 aa14.91□□□□□ -0.02
COL18A1-203ENST00000359759 SHISA4Q96DD7 197 aa14.91□□□□□ -0.02
COL18A1-203ENST00000359759 SEC22CQ9BRL7 303 aa14.91□□□□□ -0.02
COL18A1-203ENST00000359759 GINS3Q9BRX5 216 aa14.91□□□□□ -0.02
COL18A1-203ENST00000359759 TXLNGYQ9BZA5 131 aa14.91□□□□□ -0.02
COL18A1-203ENST00000359759 GABARAPH6UMI1 98 aa14.9□□□□□ -0.02
COL18A1-203ENST00000359759 GABARAPO95166 117 aa14.9□□□□□ -0.02
COL18A1-203ENST00000359759 OR8U8P0C7N1 319 aa14.9□□□□□ -0.02
COL18A1-203ENST00000359759 MAKP20794 623 aa14.9□□□□□ -0.02
COL18A1-203ENST00000359759 CNR1P21554 472 aa14.9□□□□□ -0.02
COL18A1-203ENST00000359759 OR1D4P47884 311 aa14.9□□□□□ -0.02
COL18A1-203ENST00000359759 SLC35A2P78381 396 aa14.9□□□□□ -0.02
COL18A1-203ENST00000359759 MARCH8Q5T0T0 291 aa14.9□□□□□ -0.02
COL18A1-203ENST00000359759 FRMPD2BQ6IN97 320 aa14.9□□□□□ -0.02
COL18A1-203ENST00000359759 GNG12Q9UBI6 72 aa14.9□□□□□ -0.02
COL18A1-203ENST00000359759 NXT1Q9UKK6 140 aaKnown RBP14.9□□□□□ -0.02
COL18A1-203ENST00000359759 EMC9Q9Y3B6 208 aa14.9□□□□□ -0.02
COL18A1-203ENST00000359759 A0A087WZY1 265 aa14.9□□□□□ -0.02
COL18A1-203ENST00000359759 ICMTO60725 284 aa14.9□□□□□ -0.02
COL18A1-203ENST00000359759 IQCF3P0C7M6 154 aa14.9□□□□□ -0.02
COL18A1-203ENST00000359759 ZNF728P0DKX0 622 aa14.9□□□□□ -0.02
COL18A1-203ENST00000359759 CCR7P32248 378 aa14.9□□□□□ -0.02
COL18A1-203ENST00000359759 SNCAP37840 140 aa14.9□□□□□ -0.02
COL18A1-203ENST00000359759 TBCEQ15813 527 aaPredicted RBP14.9□□□□□ -0.02
COL18A1-203ENST00000359759 SFXN4Q6P4A7 337 aa14.9□□□□□ -0.02
COL18A1-203ENST00000359759 FAM111BQ6SJ93 734 aa14.9□□□□□ -0.02
COL18A1-203ENST00000359759 RANBP10Q6VN20 620 aa14.9□□□□□ -0.02
COL18A1-203ENST00000359759 YIPF5Q969M3 257 aa14.9□□□□□ -0.02
COL18A1-203ENST00000359759 NRIP3Q9NQ35 241 aa14.9□□□□□ -0.02
COL18A1-203ENST00000359759 C1orf105O95561 183 aa14.9□□□□□ -0.02
COL18A1-203ENST00000359759 KIAA1024LP59773 190 aa14.9□□□□□ -0.02
COL18A1-203ENST00000359759 GLYR1Q49A26 553 aaPredicted RBP14.9□□□□□ -0.02
COL18A1-203ENST00000359759 OR8G2PQ6IF36 304 aa14.9□□□□□ -0.02
COL18A1-203ENST00000359759 HSD17B11Q8NBQ5 300 aa14.9□□□□□ -0.02
COL18A1-203ENST00000359759 GPR150Q8NGU9 434 aa14.9□□□□□ -0.02
COL18A1-203ENST00000359759 RNF141Q8WVD5 230 aa14.9□□□□□ -0.02
COL18A1-203ENST00000359759 CLDN24A6NM45 220 aa14.9□□□□□ -0.02
COL18A1-203ENST00000359759 CTRB1P17538 263 aa14.9□□□□□ -0.02
COL18A1-203ENST00000359759 UBE2G2P60604 165 aa14.9□□□□□ -0.02
COL18A1-203ENST00000359759 CATR1Q13166 79 aa14.9□□□□□ -0.02
COL18A1-203ENST00000359759 OR8B8Q15620 311 aa14.9□□□□□ -0.02
COL18A1-203ENST00000359759 SOHLH1Q5JUK2 328 aa14.9□□□□□ -0.02
COL18A1-203ENST00000359759 CTRB2Q6GPI1 263 aa14.9□□□□□ -0.02
COL18A1-203ENST00000359759 OR8U1Q8NH10 309 aa14.9□□□□□ -0.02
COL18A1-203ENST00000359759 GHSRQ92847 366 aa14.9□□□□□ -0.02
COL18A1-203ENST00000359759 MAN2B1O00754 1011 aa14.9□□□□□ -0.02
COL18A1-203ENST00000359759 MRPL33O75394 65 aaKnown RBP14.9□□□□□ -0.02
COL18A1-203ENST00000359759 EIF4EP06730 217 aaKnown RBP14.9□□□□□ -0.02
COL18A1-203ENST00000359759 DPP4P27487 766 aa14.9□□□□□ -0.02
COL18A1-203ENST00000359759 CTSCP53634 463 aa14.9□□□□□ -0.02
COL18A1-203ENST00000359759 ZNF852Q6ZMS4 543 aa14.9□□□□□ -0.02
COL18A1-203ENST00000359759 SLC6A17Q9H1V8 727 aa14.9□□□□□ -0.02
COL18A1-203ENST00000359759 G3V3Y1 287 aa14.89□□□□□ -0.03
COL18A1-203ENST00000359759 HBE1P02100 147 aa14.89□□□□□ -0.03
COL18A1-203ENST00000359759 GABRA4P48169 554 aa14.89□□□□□ -0.03
COL18A1-203ENST00000359759 GRB2P62993 217 aaKnown RBP14.89□□□□□ -0.03
COL18A1-203ENST00000359759 PRAMEF20Q5VT98 475 aa14.89□□□□□ -0.03
COL18A1-203ENST00000359759 Q6ZTK2 550 aa14.89□□□□□ -0.03
COL18A1-203ENST00000359759 C11orf54Q9H0W9 315 aaPredicted RBP14.89□□□□□ -0.03
COL18A1-203ENST00000359759 SERTM2A0A1B0GWG4 89 aa14.89□□□□□ -0.03
COL18A1-203ENST00000359759 RAB11AP62491 216 aa14.89□□□□□ -0.03
COL18A1-203ENST00000359759 HBG1P69891 147 aa14.89□□□□□ -0.03
COL18A1-203ENST00000359759 HBG2P69892 147 aa14.89□□□□□ -0.03
COL18A1-203ENST00000359759 OR56B1Q8NGI3 324 aa14.89□□□□□ -0.03
COL18A1-203ENST00000359759 SIAEQ9HAT2 523 aa14.89□□□□□ -0.03
COL18A1-203ENST00000359759 NENFQ9UMX5 172 aa14.89□□□□□ -0.03
COL18A1-203ENST00000359759 PRKRAO75569 313 aaKnown RBP14.89□□□□□ -0.03
COL18A1-203ENST00000359759 PAX6P26367 422 aa14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms