RNA–Protein interactions for RNA: ENST00000359082.3

SHANK1-202, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 5 BASIC

Gene SHANK1, Length 6,459 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-202ENST00000359082 TMX2-CTNND1H3BSU7 103 aa17.06■□□□□ 0.32
SHANK1-202ENST00000359082 P2RY10O00398 339 aa17.06■□□□□ 0.32
SHANK1-202ENST00000359082 HTR2CP28335 458 aa17.06■□□□□ 0.32
SHANK1-202ENST00000359082 ZNF92Q03936 586 aa17.06■□□□□ 0.32
SHANK1-202ENST00000359082 KCNJ8Q15842 424 aa17.06■□□□□ 0.32
SHANK1-202ENST00000359082 LINC00346Q8IVM7 164 aa17.06■□□□□ 0.32
SHANK1-202ENST00000359082 ZNF439Q8NDP4 499 aa17.06■□□□□ 0.32
SHANK1-202ENST00000359082 OR56B1Q8NGI3 324 aa17.06■□□□□ 0.32
SHANK1-202ENST00000359082 ARRDC3Q96B67 414 aa17.06■□□□□ 0.32
SHANK1-202ENST00000359082 SEC22AQ96IW7 307 aa17.06■□□□□ 0.32
SHANK1-202ENST00000359082 EVA1AQ9H8M9 152 aa17.06■□□□□ 0.32
SHANK1-202ENST00000359082 A0A1B0GVG6 124 aa17.06■□□□□ 0.32
SHANK1-202ENST00000359082 BCKDHBP21953 392 aa17.06■□□□□ 0.32
SHANK1-202ENST00000359082 NME2P22392 152 aa17.06■□□□□ 0.32
SHANK1-202ENST00000359082 S100A7P31151 101 aa17.06■□□□□ 0.32
SHANK1-202ENST00000359082 MANEAQ5SRI9 462 aa17.06■□□□□ 0.32
SHANK1-202ENST00000359082 ZNF75AQ96N20 296 aa17.06■□□□□ 0.32
SHANK1-202ENST00000359082 SEMA4GQ9NTN9 838 aa17.06■□□□□ 0.32
SHANK1-202ENST00000359082 GNG12Q9UBI6 72 aa17.06■□□□□ 0.32
SHANK1-202ENST00000359082 MYH3P11055 1940 aa17.06■□□□□ 0.32
SHANK1-202ENST00000359082 IL1AP01583 271 aa17.06■□□□□ 0.32
SHANK1-202ENST00000359082 RPA2P15927 270 aa17.06■□□□□ 0.32
SHANK1-202ENST00000359082 DAPP51397 102 aa17.06■□□□□ 0.32
SHANK1-202ENST00000359082 CGB2Q6NT52 195 aa17.06■□□□□ 0.32
SHANK1-202ENST00000359082 NAA40Q86UY6 237 aa17.06■□□□□ 0.32
SHANK1-202ENST00000359082 ARFGAP1Q8N6T3 406 aa17.06■□□□□ 0.32
SHANK1-202ENST00000359082 GATA6Q92908 595 aa17.06■□□□□ 0.32
SHANK1-202ENST00000359082 TNFRSF13CQ96RJ3 184 aa17.06■□□□□ 0.32
SHANK1-202ENST00000359082 AGAP14A8MT82 685 aa17.06■□□□□ 0.32
SHANK1-202ENST00000359082 CLDN1O95832 211 aa17.06■□□□□ 0.32
SHANK1-202ENST00000359082 BIDP55957 195 aa17.06■□□□□ 0.32
SHANK1-202ENST00000359082 SLC36A2Q495M3 483 aa17.06■□□□□ 0.32
SHANK1-202ENST00000359082 ACTBL2Q562R1 376 aa17.06■□□□□ 0.32
SHANK1-202ENST00000359082 ZNF595Q8IYB9 648 aa17.06■□□□□ 0.32
SHANK1-202ENST00000359082 OR13C9Q8NGT0 318 aa17.06■□□□□ 0.32
SHANK1-202ENST00000359082 OR56B4Q8NH76 319 aa17.06■□□□□ 0.32
SHANK1-202ENST00000359082 LGALS14Q8TCE9 139 aa17.06■□□□□ 0.32
SHANK1-202ENST00000359082 OR2M2Q96R28 347 aa17.06■□□□□ 0.32
SHANK1-202ENST00000359082 GFOD1Q9NXC2 390 aa17.06■□□□□ 0.32
SHANK1-202ENST00000359082 TMEM212A6NML5 194 aa17.06■□□□□ 0.32
SHANK1-202ENST00000359082 SLAMF7Q9NQ25 335 aa17.06■□□□□ 0.32
SHANK1-202ENST00000359082 HCSTQ9UBK5 93 aa17.06■□□□□ 0.32
SHANK1-202ENST00000359082 CDK4P11802 303 aa17.05■□□□□ 0.32
SHANK1-202ENST00000359082 GABRA5P31644 462 aa17.05■□□□□ 0.32
SHANK1-202ENST00000359082 TLE1Q04724 770 aa17.05■□□□□ 0.32
SHANK1-202ENST00000359082 RBMS2Q15434 407 aaKnown RBP17.05■□□□□ 0.32
SHANK1-202ENST00000359082 TMEM59Q9BXS4 323 aa17.05■□□□□ 0.32
SHANK1-202ENST00000359082 TOR1AO14656 332 aa17.05■□□□□ 0.32
SHANK1-202ENST00000359082 AQP9O43315 295 aa17.05■□□□□ 0.32
SHANK1-202ENST00000359082 KCNK5O95279 499 aa17.05■□□□□ 0.32
SHANK1-202ENST00000359082 UTS2O95399 124 aa17.05■□□□□ 0.32
SHANK1-202ENST00000359082 PPP3CBP16298 524 aa17.05■□□□□ 0.32
SHANK1-202ENST00000359082 CSNK1DP48730 415 aa17.05■□□□□ 0.32
SHANK1-202ENST00000359082 TSPAN31Q12999 210 aa17.05■□□□□ 0.32
SHANK1-202ENST00000359082 GALEQ14376 348 aa17.05■□□□□ 0.32
SHANK1-202ENST00000359082 SPRED3Q2MJR0 410 aa17.05■□□□□ 0.32
SHANK1-202ENST00000359082 SLC22A25Q6T423 547 aa17.05■□□□□ 0.32
SHANK1-202ENST00000359082 C3orf49Q96BT1 292 aa17.05■□□□□ 0.32
SHANK1-202ENST00000359082 ZNF582Q96NG8 517 aaPredicted RBP17.05■□□□□ 0.32
SHANK1-202ENST00000359082 UBL7Q96S82 380 aaPredicted RBP17.05■□□□□ 0.32
SHANK1-202ENST00000359082 TAS2R16Q9NYV7 291 aa17.05■□□□□ 0.32
SHANK1-202ENST00000359082 ARL16Q0P5N6 197 aa17.05■□□□□ 0.32
SHANK1-202ENST00000359082 BTN1A1Q13410 526 aa17.05■□□□□ 0.32
SHANK1-202ENST00000359082 CAMK2BQ13554 666 aa17.05■□□□□ 0.32
SHANK1-202ENST00000359082 FRMPD2BQ6IN97 320 aa17.05■□□□□ 0.32
SHANK1-202ENST00000359082 CLEC14AQ86T13 490 aa17.05■□□□□ 0.32
SHANK1-202ENST00000359082 METTL4Q8N3J2 472 aa17.05■□□□□ 0.32
SHANK1-202ENST00000359082 ALG12Q9BV10 488 aa17.05■□□□□ 0.32
SHANK1-202ENST00000359082 ZNF91Q05481 1191 aa17.05■□□□□ 0.32
SHANK1-202ENST00000359082 ADIPOR2Q86V24 386 aa17.05■□□□□ 0.32
SHANK1-202ENST00000359082 LAX1Q8IWV1 398 aa17.05■□□□□ 0.32
SHANK1-202ENST00000359082 LKAAEAR1Q8TD35 194 aa17.05■□□□□ 0.32
SHANK1-202ENST00000359082 CLEC3BP05452 202 aa17.05■□□□□ 0.32
SHANK1-202ENST00000359082 C12orf49Q9H741 205 aa17.05■□□□□ 0.32
SHANK1-202ENST00000359082 NRIP3Q9NQ35 241 aa17.05■□□□□ 0.32
SHANK1-202ENST00000359082 GABARAPH6UMI1 98 aa17.04■□□□□ 0.32
SHANK1-202ENST00000359082 H7C1Q1 480 aa17.04■□□□□ 0.32
SHANK1-202ENST00000359082 GABARAPO95166 117 aa17.04■□□□□ 0.32
SHANK1-202ENST00000359082 HLA-DOBP13765 273 aa17.04■□□□□ 0.32
SHANK1-202ENST00000359082 HOXD9P28356 352 aaPredicted RBP17.04■□□□□ 0.32
SHANK1-202ENST00000359082 HTRA3P83110 453 aa17.04■□□□□ 0.32
SHANK1-202ENST00000359082 LINC00696Q6ZRV3 163 aa17.04■□□□□ 0.32
SHANK1-202ENST00000359082 EMC9Q9Y3B6 208 aa17.04■□□□□ 0.32
SHANK1-202ENST00000359082 CTDSP2O14595 271 aa17.04■□□□□ 0.32
SHANK1-202ENST00000359082 PRAMEF4O60810 478 aa17.04■□□□□ 0.32
SHANK1-202ENST00000359082 FOLR1P15328 257 aa17.04■□□□□ 0.32
SHANK1-202ENST00000359082 NUDT1P36639 197 aa17.04■□□□□ 0.32
SHANK1-202ENST00000359082 MAGEB1P43366 347 aa17.04■□□□□ 0.32
SHANK1-202ENST00000359082 PPT1P50897 306 aa17.04■□□□□ 0.32
SHANK1-202ENST00000359082 TMEM217Q8N7C4 229 aa17.04■□□□□ 0.32
SHANK1-202ENST00000359082 SCCPDHQ8NBX0 429 aa17.04■□□□□ 0.32
SHANK1-202ENST00000359082 DVL3Q92997 716 aaPredicted RBP17.04■□□□□ 0.32
SHANK1-202ENST00000359082 CTRCQ99895 268 aa17.04■□□□□ 0.32
SHANK1-202ENST00000359082 PDLIM7Q9NR12 457 aa17.04■□□□□ 0.32
SHANK1-202ENST00000359082 SMCO4Q9NRQ5 59 aa17.04■□□□□ 0.32
SHANK1-202ENST00000359082 DNMT3BQ9UBC3 853 aaKnown RBP17.04■□□□□ 0.32
SHANK1-202ENST00000359082 FAM78AQ5JUQ0 283 aa17.04■□□□□ 0.32
SHANK1-202ENST00000359082 OR2T11Q8NH01 316 aa17.04■□□□□ 0.32
SHANK1-202ENST00000359082 PCNPQ8WW12 178 aaKnown RBP17.04■□□□□ 0.32
SHANK1-202ENST00000359082 AMDHD1Q96NU7 426 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms