RNA–Protein interactions for RNA: ENST00000359031.8

GABPB1-202, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 5 BASIC

Gene GABPB1, Length 1,633 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-202ENST00000359031 GDPD3Q7L5L3 318 aa13.54□□□□□ -0.24
GABPB1-202ENST00000359031 HIST3H2AQ7L7L0 130 aa13.54□□□□□ -0.24
GABPB1-202ENST00000359031 ANKRD37Q7Z713 158 aa13.54□□□□□ -0.24
GABPB1-202ENST00000359031 TPRA1Q86W33 373 aa13.54□□□□□ -0.24
GABPB1-202ENST00000359031 TEX19Q8NA77 164 aa13.54□□□□□ -0.24
GABPB1-202ENST00000359031 ZBTB44Q8NCP5 570 aa13.54□□□□□ -0.24
GABPB1-202ENST00000359031 ABHD4Q8TB40 342 aa13.54□□□□□ -0.24
GABPB1-202ENST00000359031 HIST1H2ACQ93077 130 aa13.54□□□□□ -0.24
GABPB1-202ENST00000359031 SMIM19Q96E16 107 aa13.54□□□□□ -0.24
GABPB1-202ENST00000359031 KTI12Q96EK9 354 aaPredicted RBP13.54□□□□□ -0.24
GABPB1-202ENST00000359031 Q96M85 177 aa13.54□□□□□ -0.24
GABPB1-202ENST00000359031 OR6C1Q96RD1 312 aa13.54□□□□□ -0.24
GABPB1-202ENST00000359031 LPAR4Q99677 370 aa13.54□□□□□ -0.24
GABPB1-202ENST00000359031 COMMD3Q9UBI1 195 aa13.54□□□□□ -0.24
GABPB1-202ENST00000359031 PPIEQ9UNP9 301 aaKnown RBP13.54□□□□□ -0.24
GABPB1-202ENST00000359031 RP1P56715 2156 aa13.54□□□□□ -0.24
GABPB1-202ENST00000359031 IGHV5-10-1A0A0J9YXX1 117 aa13.53□□□□□ -0.24
GABPB1-202ENST00000359031 FADS1O60427 444 aa13.53□□□□□ -0.24
GABPB1-202ENST00000359031 TMCC2O75069 709 aa13.53□□□□□ -0.24
GABPB1-202ENST00000359031 SCRG1O75711 98 aa13.53□□□□□ -0.24
GABPB1-202ENST00000359031 NCR1O76036 304 aa13.53□□□□□ -0.24
GABPB1-202ENST00000359031 MT-ATP6P00846 226 aa13.53□□□□□ -0.24
GABPB1-202ENST00000359031 BGLAPP02818 100 aa13.53□□□□□ -0.24
GABPB1-202ENST00000359031 HEXBP07686 556 aa13.53□□□□□ -0.24
GABPB1-202ENST00000359031 ITPKBP27987 946 aa13.53□□□□□ -0.24
GABPB1-202ENST00000359031 POLR2HP52434 150 aaKnown RBP13.53□□□□□ -0.24
GABPB1-202ENST00000359031 RNF4P78317 190 aa13.53□□□□□ -0.24
GABPB1-202ENST00000359031 SCN1BQ07699 218 aa13.53□□□□□ -0.24
GABPB1-202ENST00000359031 CDK5R1Q15078 307 aa13.53□□□□□ -0.24
GABPB1-202ENST00000359031 LPAL2Q16609 132 aa13.53□□□□□ -0.24
GABPB1-202ENST00000359031 BAK1Q16611 211 aa13.53□□□□□ -0.24
GABPB1-202ENST00000359031 CLPPQ16740 277 aaPredicted RBP13.53□□□□□ -0.24
GABPB1-202ENST00000359031 CCDC58Q4VC31 144 aa13.53□□□□□ -0.24
GABPB1-202ENST00000359031 TP53I3Q53FA7 332 aa13.53□□□□□ -0.24
GABPB1-202ENST00000359031 LINC01590Q5TEZ4 76 aa13.53□□□□□ -0.24
GABPB1-202ENST00000359031 PEAR1Q5VY43 1037 aaPredicted RBP13.53□□□□□ -0.24
GABPB1-202ENST00000359031 RPL22L1Q6P5R6 122 aaKnown RBP13.53□□□□□ -0.24
GABPB1-202ENST00000359031 CCBE1Q6UXH8 406 aaPredicted RBP13.53□□□□□ -0.24
GABPB1-202ENST00000359031 PXKQ7Z7A4 578 aa13.53□□□□□ -0.24
GABPB1-202ENST00000359031 RFLNBQ8N5W9 214 aa13.53□□□□□ -0.24
GABPB1-202ENST00000359031 EXD3Q8N9H8 876 aa13.53□□□□□ -0.24
GABPB1-202ENST00000359031 OR51L1Q8NGJ5 315 aa13.53□□□□□ -0.24
GABPB1-202ENST00000359031 OR6K6Q8NGW6 343 aa13.53□□□□□ -0.24
GABPB1-202ENST00000359031 NUBPLQ8TB37 319 aa13.53□□□□□ -0.24
GABPB1-202ENST00000359031 ZPLD1Q8TCW7 415 aa13.53□□□□□ -0.24
GABPB1-202ENST00000359031 SMAP2Q8WU79 429 aaPredicted RBP13.53□□□□□ -0.24
GABPB1-202ENST00000359031 SNX33Q8WV41 574 aa13.53□□□□□ -0.24
GABPB1-202ENST00000359031 ZNF524Q96C55 264 aa13.53□□□□□ -0.24
GABPB1-202ENST00000359031 PELI1Q96FA3 418 aa13.53□□□□□ -0.24
GABPB1-202ENST00000359031 CCDC74BQ96LY2 380 aa13.53□□□□□ -0.24
GABPB1-202ENST00000359031 ARID1BQ8NFD5 2236 aaPredicted RBP13.53□□□□□ -0.24
GABPB1-202ENST00000359031 CEP250Q9BV73 2442 aa13.53□□□□□ -0.24
GABPB1-202ENST00000359031 ASXL3Q9C0F0 2248 aa13.53□□□□□ -0.24
GABPB1-202ENST00000359031 CACNA1EQ15878 2313 aa13.53□□□□□ -0.24
GABPB1-202ENST00000359031 IDSB3KWA1 339 aa13.53□□□□□ -0.24
GABPB1-202ENST00000359031 SEC14L5O43304 696 aa13.53□□□□□ -0.24
GABPB1-202ENST00000359031 SELENOFO60613 162 aa13.53□□□□□ -0.24
GABPB1-202ENST00000359031 ALOX12BO75342 701 aa13.53□□□□□ -0.24
GABPB1-202ENST00000359031 SLC25A12O75746 678 aa13.53□□□□□ -0.24
GABPB1-202ENST00000359031 CYC1P08574 325 aa13.53□□□□□ -0.24
GABPB1-202ENST00000359031 CDKN2AP42771 156 aaKnown RBP13.53□□□□□ -0.24
GABPB1-202ENST00000359031 SLC26A5P58743 744 aa13.53□□□□□ -0.24
GABPB1-202ENST00000359031 DCDP81605 110 aaKnown RBP13.53□□□□□ -0.24
GABPB1-202ENST00000359031 ASAH1Q13510 395 aa13.53□□□□□ -0.24
GABPB1-202ENST00000359031 RIN1Q13671 783 aa13.53□□□□□ -0.24
GABPB1-202ENST00000359031 CNIH2Q6PI25 160 aa13.53□□□□□ -0.24
GABPB1-202ENST00000359031 C5orf46Q6UWT4 87 aa13.53□□□□□ -0.24
GABPB1-202ENST00000359031 SHISA6Q6ZSJ9 500 aa13.53□□□□□ -0.24
GABPB1-202ENST00000359031 CEACAM19Q7Z692 300 aa13.53□□□□□ -0.24
GABPB1-202ENST00000359031 NFAM1Q8NET5 270 aaPredicted RBP13.53□□□□□ -0.24
GABPB1-202ENST00000359031 TXNDC15Q96J42 360 aa13.53□□□□□ -0.24
GABPB1-202ENST00000359031 DEPDC7Q96QD5 511 aa13.53□□□□□ -0.24
GABPB1-202ENST00000359031 KLHDC3Q9BQ90 382 aa13.53□□□□□ -0.24
GABPB1-202ENST00000359031 SOSTQ9BQB4 213 aa13.53□□□□□ -0.24
GABPB1-202ENST00000359031 TTYH2Q9BSA4 534 aa13.53□□□□□ -0.24
GABPB1-202ENST00000359031 ALG12Q9BV10 488 aa13.53□□□□□ -0.24
GABPB1-202ENST00000359031 FRYLO94915 3013 aa13.53□□□□□ -0.24
GABPB1-202ENST00000359031 A0A1W2PQ09 198 aa13.52□□□□□ -0.25
GABPB1-202ENST00000359031 DVL2O14641 736 aa13.52□□□□□ -0.25
GABPB1-202ENST00000359031 SCO2O43819 266 aa13.52□□□□□ -0.25
GABPB1-202ENST00000359031 HPGDSO60760 199 aa13.52□□□□□ -0.25
GABPB1-202ENST00000359031 TIAF1O95411 115 aa13.52□□□□□ -0.25
GABPB1-202ENST00000359031 NUDT14O95848 222 aa13.52□□□□□ -0.25
GABPB1-202ENST00000359031 ADRB1P08588 477 aa13.52□□□□□ -0.25
GABPB1-202ENST00000359031 GDI2P50395 445 aaKnown RBP13.52□□□□□ -0.25
GABPB1-202ENST00000359031 SPEM2Q0P670 501 aa13.52□□□□□ -0.25
GABPB1-202ENST00000359031 QPRTQ15274 297 aa13.52□□□□□ -0.25
GABPB1-202ENST00000359031 PYDC2Q56P42 97 aa13.52□□□□□ -0.25
GABPB1-202ENST00000359031 ZNF385CQ66K41 422 aaPredicted RBP13.52□□□□□ -0.25
GABPB1-202ENST00000359031 RPTNQ6XPR3 784 aa13.52□□□□□ -0.25
GABPB1-202ENST00000359031 SLC16A9Q7RTY1 509 aa13.52□□□□□ -0.25
GABPB1-202ENST00000359031 MAMDC2Q7Z304 686 aaPredicted RBP13.52□□□□□ -0.25
GABPB1-202ENST00000359031 GRINAQ7Z429 371 aa13.52□□□□□ -0.25
GABPB1-202ENST00000359031 EGFL6Q8IUX8 553 aa13.52□□□□□ -0.25
GABPB1-202ENST00000359031 HAVCR2Q8TDQ0 301 aa13.52□□□□□ -0.25
GABPB1-202ENST00000359031 CHAC2Q8WUX2 184 aa13.52□□□□□ -0.25
GABPB1-202ENST00000359031 ZNRF4Q8WWF5 429 aa13.52□□□□□ -0.25
GABPB1-202ENST00000359031 METTL21AQ8WXB1 218 aa13.52□□□□□ -0.25
GABPB1-202ENST00000359031 PIGKQ92643 395 aa13.52□□□□□ -0.25
GABPB1-202ENST00000359031 GHSRQ92847 366 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms