RNA–Protein interactions for RNA: ENST00000357162.6

VPS13B-202, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VPS13B, Length 14,019 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-202ENST00000357162 SURF4O15260 269 aa6.12□□□□□ -1.43
VPS13B-202ENST00000357162 C8AP07357 584 aa6.12□□□□□ -1.43
VPS13B-202ENST00000357162 SRMP19623 302 aa6.12□□□□□ -1.43
VPS13B-202ENST00000357162 AQP2P41181 271 aa6.12□□□□□ -1.43
VPS13B-202ENST00000357162 GSK3AP49840 483 aa6.12□□□□□ -1.43
VPS13B-202ENST00000357162 SGSHP51688 502 aa6.12□□□□□ -1.43
VPS13B-202ENST00000357162 ERVPABLB-1P60509 514 aa6.12□□□□□ -1.43
VPS13B-202ENST00000357162 GRB2P62993 217 aaKnown RBP6.12□□□□□ -1.43
VPS13B-202ENST00000357162 PDZK1IP1Q13113 114 aa6.12□□□□□ -1.43
VPS13B-202ENST00000357162 MZB1Q8WU39 189 aa6.12□□□□□ -1.43
VPS13B-202ENST00000357162 CCDC120Q96HB5 630 aa6.12□□□□□ -1.43
VPS13B-202ENST00000357162 ZNF395Q9H8N7 513 aaPredicted RBP6.12□□□□□ -1.43
VPS13B-202ENST00000357162 RCE1Q9Y256 329 aa6.12□□□□□ -1.43
VPS13B-202ENST00000357162 SLC27A5Q9Y2P5 690 aa6.12□□□□□ -1.43
VPS13B-202ENST00000357162 ECM29Q5VYK3 1845 aa6.12□□□□□ -1.43
VPS13B-202ENST00000357162 EIF1BO60739 113 aaKnown RBP6.12□□□□□ -1.43
VPS13B-202ENST00000357162 ATP1B3P54709 279 aa6.12□□□□□ -1.43
VPS13B-202ENST00000357162 LILRA2Q8N149 483 aa6.12□□□□□ -1.43
VPS13B-202ENST00000357162 NSUN5Q96P11 429 aaKnown RBP6.12□□□□□ -1.43
VPS13B-202ENST00000357162 HCAR1Q9BXC0 346 aa6.12□□□□□ -1.43
VPS13B-202ENST00000357162 KIR2DS5A0A0G2JLQ3 304 aa6.12□□□□□ -1.43
VPS13B-202ENST00000357162 A0A0G2JNG1 304 aa6.12□□□□□ -1.43
VPS13B-202ENST00000357162 A8MV72 311 aaPredicted RBP6.12□□□□□ -1.43
VPS13B-202ENST00000357162 KIR2DS3K7RE56 304 aa6.12□□□□□ -1.43
VPS13B-202ENST00000357162 ABCD4O14678 606 aa6.12□□□□□ -1.43
VPS13B-202ENST00000357162 PLGP00747 810 aaPredicted RBP6.12□□□□□ -1.43
VPS13B-202ENST00000357162 HAPLN1P10915 354 aaPredicted RBP6.12□□□□□ -1.43
VPS13B-202ENST00000357162 RAB11AP62491 216 aa6.12□□□□□ -1.43
VPS13B-202ENST00000357162 SHC2P98077 582 aa6.12□□□□□ -1.43
VPS13B-202ENST00000357162 KIR2DS5Q14953 304 aa6.12□□□□□ -1.43
VPS13B-202ENST00000357162 RHOUQ7L0Q8 258 aa6.12□□□□□ -1.43
VPS13B-202ENST00000357162 GRAMD2AQ8IUY3 354 aa6.12□□□□□ -1.43
VPS13B-202ENST00000357162 OR5AK3PQ8NH89 298 aa6.12□□□□□ -1.43
VPS13B-202ENST00000357162 DUSP22Q9NRW4 184 aa6.12□□□□□ -1.43
VPS13B-202ENST00000357162 SMPD1P17405 629 aa6.12□□□□□ -1.43
VPS13B-202ENST00000357162 OR1E2P47887 323 aa6.12□□□□□ -1.43
VPS13B-202ENST00000357162 CLDN6P56747 220 aa6.12□□□□□ -1.43
VPS13B-202ENST00000357162 TREML2Q5T2D2 321 aa6.12□□□□□ -1.43
VPS13B-202ENST00000357162 RNF111Q6ZNA4 994 aa6.12□□□□□ -1.43
VPS13B-202ENST00000357162 FOXRED2Q8IWF2 684 aa6.12□□□□□ -1.43
VPS13B-202ENST00000357162 OR52D1Q9H346 318 aa6.12□□□□□ -1.43
VPS13B-202ENST00000357162 YIPF1Q9Y548 306 aa6.12□□□□□ -1.43
VPS13B-202ENST00000357162 MDFIC2A0A1B0GVS7 189 aa6.12□□□□□ -1.43
VPS13B-202ENST00000357162 NAA10P41227 235 aaPredicted RBP6.12□□□□□ -1.43
VPS13B-202ENST00000357162 XCR1P46094 333 aa6.12□□□□□ -1.43
VPS13B-202ENST00000357162 WDR73Q6P4I2 378 aa6.12□□□□□ -1.43
VPS13B-202ENST00000357162 BEND4Q6ZU67 534 aa6.12□□□□□ -1.43
VPS13B-202ENST00000357162 SCAMP5Q8TAC9 235 aa6.12□□□□□ -1.43
VPS13B-202ENST00000357162 CHST6Q9GZX3 395 aa6.12□□□□□ -1.43
VPS13B-202ENST00000357162 ANKRD61A6NGH8 418 aa6.12□□□□□ -1.43
VPS13B-202ENST00000357162 SERPINA5P05154 406 aa6.12□□□□□ -1.43
VPS13B-202ENST00000357162 RRASP10301 218 aa6.12□□□□□ -1.43
VPS13B-202ENST00000357162 PPP1R3BQ86XI6 285 aa6.12□□□□□ -1.43
VPS13B-202ENST00000357162 KLHDC8AQ8IYD2 350 aa6.12□□□□□ -1.43
VPS13B-202ENST00000357162 ZNF679Q8IYX0 411 aa6.12□□□□□ -1.43
VPS13B-202ENST00000357162 MARVELD1Q9BSK0 173 aa6.12□□□□□ -1.43
VPS13B-202ENST00000357162 POMT2Q9UKY4 750 aa6.12□□□□□ -1.43
VPS13B-202ENST00000357162 SIPA1L3O60292 1781 aaPredicted RBP6.12□□□□□ -1.43
VPS13B-202ENST00000357162 H7BYZ3 331 aa6.12□□□□□ -1.43
VPS13B-202ENST00000357162 M0R143 59 aa6.12□□□□□ -1.43
VPS13B-202ENST00000357162 CDC123O75794 336 aaPredicted RBP6.12□□□□□ -1.43
VPS13B-202ENST00000357162 PTHLHP12272 177 aa6.12□□□□□ -1.43
VPS13B-202ENST00000357162 ACHEP22303 614 aa6.12□□□□□ -1.43
VPS13B-202ENST00000357162 IHHQ14623 411 aa6.12□□□□□ -1.43
VPS13B-202ENST00000357162 GPR157Q5UAW9 335 aa6.12□□□□□ -1.43
VPS13B-202ENST00000357162 HFE2Q6ZVN8 426 aa6.12□□□□□ -1.43
VPS13B-202ENST00000357162 OR52H1Q8NGJ2 320 aa6.12□□□□□ -1.43
VPS13B-202ENST00000357162 IRF7Q92985 503 aa6.12□□□□□ -1.43
VPS13B-202ENST00000357162 MR1Q95460 341 aa6.12□□□□□ -1.43
VPS13B-202ENST00000357162 GPR174Q9BXC1 333 aa6.12□□□□□ -1.43
VPS13B-202ENST00000357162 STEAP1Q9UHE8 339 aa6.12□□□□□ -1.43
VPS13B-202ENST00000357162 LDB2O43679 373 aa6.12□□□□□ -1.43
VPS13B-202ENST00000357162 HPGDSO60760 199 aa6.12□□□□□ -1.43
VPS13B-202ENST00000357162 DRD5P21918 477 aa6.12□□□□□ -1.43
VPS13B-202ENST00000357162 SUB1P53999 127 aaKnown RBP eCLIP6.12□□□□□ -1.43
VPS13B-202ENST00000357162 DOC2BQ14184 412 aa6.12□□□□□ -1.43
VPS13B-202ENST00000357162 PAGE3Q5JUK9 113 aa6.12□□□□□ -1.43
VPS13B-202ENST00000357162 FAHD1Q6P587 224 aa6.12□□□□□ -1.43
VPS13B-202ENST00000357162 LEG1Q6P5S2 330 aa6.12□□□□□ -1.43
VPS13B-202ENST00000357162 PSRC1Q6PGN9 363 aaPredicted RBP6.12□□□□□ -1.43
VPS13B-202ENST00000357162 DPPA4Q7L190 304 aa6.12□□□□□ -1.43
VPS13B-202ENST00000357162 LSMEM1Q8N8F7 131 aa6.12□□□□□ -1.43
VPS13B-202ENST00000357162 OR1S2Q8NGQ3 325 aa6.12□□□□□ -1.43
VPS13B-202ENST00000357162 SH3RF2Q8TEC5 729 aa6.12□□□□□ -1.43
VPS13B-202ENST00000357162 FAM3DQ96BQ1 224 aa6.12□□□□□ -1.43
VPS13B-202ENST00000357162 METTL7AQ9H8H3 244 aa6.12□□□□□ -1.43
VPS13B-202ENST00000357162 ERVMER34-1Q9H9K5 563 aa6.12□□□□□ -1.43
VPS13B-202ENST00000357162 NCDNQ9UBB6 729 aa6.12□□□□□ -1.43
VPS13B-202ENST00000357162 PDCD11Q14690 1871 aaKnown RBP6.12□□□□□ -1.43
VPS13B-202ENST00000357162 ZNF541Q9H0D2 1346 aa6.12□□□□□ -1.43
VPS13B-202ENST00000357162 GLTPD2A6NH11 291 aa6.12□□□□□ -1.43
VPS13B-202ENST00000357162 GRXCR1A8MXD5 290 aa6.12□□□□□ -1.43
VPS13B-202ENST00000357162 VAMP5O95183 116 aa6.12□□□□□ -1.43
VPS13B-202ENST00000357162 DPP4P27487 766 aa6.12□□□□□ -1.43
VPS13B-202ENST00000357162 MC1RQ01726 317 aa6.12□□□□□ -1.43
VPS13B-202ENST00000357162 TOR2AQ5JU69 321 aa6.12□□□□□ -1.43
VPS13B-202ENST00000357162 C1orf220Q5T0J3 134 aa6.12□□□□□ -1.43
VPS13B-202ENST00000357162 PRSS58Q8IYP2 241 aa6.12□□□□□ -1.43
VPS13B-202ENST00000357162 PDXPQ96GD0 296 aa6.12□□□□□ -1.43
VPS13B-202ENST00000357162 NXT1Q9UKK6 140 aaKnown RBP6.12□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms