RNA–Protein interactions for RNA: ENST00000357085.4

TRIM38-201, Transcript of tripartite motif containing 38, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM38, Length 9,413 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38-201ENST00000357085 A6NIZ1 184 aa6.09□□□□□ -1.43
TRIM38-201ENST00000357085 SLC31A2O15432 143 aa6.09□□□□□ -1.43
TRIM38-201ENST00000357085 OR2T1O43869 369 aa6.09□□□□□ -1.43
TRIM38-201ENST00000357085 USP2O75604 605 aaPredicted RBP6.09□□□□□ -1.43
TRIM38-201ENST00000357085 HLA-DQA2P01906 255 aa6.09□□□□□ -1.43
TRIM38-201ENST00000357085 GP1BAP07359 652 aa6.09□□□□□ -1.43
TRIM38-201ENST00000357085 NFYBP25208 207 aa6.09□□□□□ -1.43
TRIM38-201ENST00000357085 RAP1BP61224 184 aa6.09□□□□□ -1.43
TRIM38-201ENST00000357085 RPS13P62277 151 aaKnown RBP6.09□□□□□ -1.43
TRIM38-201ENST00000357085 RAP1AP62834 184 aa6.09□□□□□ -1.43
TRIM38-201ENST00000357085 ELOCQ15369 112 aa6.09□□□□□ -1.43
TRIM38-201ENST00000357085 BAP18Q8IXM2 172 aa6.09□□□□□ -1.43
TRIM38-201ENST00000357085 NUS1Q96E22 293 aa6.09□□□□□ -1.43
TRIM38-201ENST00000357085 HRH4Q9H3N8 390 aa6.09□□□□□ -1.43
TRIM38-201ENST00000357085 CACFD1Q9UGQ2 172 aa6.09□□□□□ -1.43
TRIM38-201ENST00000357085 POLR2AP24928 1970 aaKnown RBP6.09□□□□□ -1.43
TRIM38-201ENST00000357085 TCAPO15273 167 aa6.09□□□□□ -1.43
TRIM38-201ENST00000357085 GPR137BO60478 399 aa6.09□□□□□ -1.43
TRIM38-201ENST00000357085 CRYBA1P05813 215 aa6.09□□□□□ -1.43
TRIM38-201ENST00000357085 CSN2P05814 226 aa6.09□□□□□ -1.43
TRIM38-201ENST00000357085 DCNP07585 359 aaKnown RBP6.09□□□□□ -1.43
TRIM38-201ENST00000357085 MECP2P51608 486 aaKnown RBP6.09□□□□□ -1.43
TRIM38-201ENST00000357085 FOXK2Q01167 660 aa6.09□□□□□ -1.43
TRIM38-201ENST00000357085 CXCL9Q07325 125 aa6.09□□□□□ -1.43
TRIM38-201ENST00000357085 AGBL4Q5VU57 503 aa6.09□□□□□ -1.43
TRIM38-201ENST00000357085 RGS7BPQ6MZT1 257 aaPredicted RBP6.09□□□□□ -1.43
TRIM38-201ENST00000357085 PLPP6Q8IY26 295 aa6.09□□□□□ -1.43
TRIM38-201ENST00000357085 RELL2Q8NC24 303 aaPredicted RBP6.09□□□□□ -1.43
TRIM38-201ENST00000357085 ST7LQ8TDW4 575 aa6.09□□□□□ -1.43
TRIM38-201ENST00000357085 MYLIPQ8WY64 445 aa6.09□□□□□ -1.43
TRIM38-201ENST00000357085 OR2M4Q96R27 311 aa6.09□□□□□ -1.43
TRIM38-201ENST00000357085 C1QTNF6Q9BXI9 259 aa6.09□□□□□ -1.43
TRIM38-201ENST00000357085 NFKBIEO00221 500 aa6.09□□□□□ -1.43
TRIM38-201ENST00000357085 PLPP2O43688 288 aa6.09□□□□□ -1.43
TRIM38-201ENST00000357085 IFNA5P01569 189 aa6.09□□□□□ -1.43
TRIM38-201ENST00000357085 OC90Q02509 493 aaPredicted RBP6.09□□□□□ -1.43
TRIM38-201ENST00000357085 FCRL6Q6DN72 434 aa6.09□□□□□ -1.43
TRIM38-201ENST00000357085 DHRS7BQ6IAN0 325 aaPredicted RBP6.09□□□□□ -1.43
TRIM38-201ENST00000357085 OR5M10Q6IEU7 315 aa6.09□□□□□ -1.43
TRIM38-201ENST00000357085 USP53Q70EK8 1073 aa6.09□□□□□ -1.43
TRIM38-201ENST00000357085 ABI3BPQ7Z7G0 1075 aa6.09□□□□□ -1.43
TRIM38-201ENST00000357085 ARRDC1Q8N5I2 433 aa6.09□□□□□ -1.43
TRIM38-201ENST00000357085 C2orf69Q8N8R5 385 aa6.09□□□□□ -1.43
TRIM38-201ENST00000357085 OR8G5Q8NG78 346 aa6.09□□□□□ -1.43
TRIM38-201ENST00000357085 ELP3Q9H9T3 547 aa6.09□□□□□ -1.43
TRIM38-201ENST00000357085 GPR160Q9UJ42 338 aa6.09□□□□□ -1.43
TRIM38-201ENST00000357085 FAM186AA6NE01 2351 aa6.09□□□□□ -1.43
TRIM38-201ENST00000357085 AP4M1O00189 453 aa6.09□□□□□ -1.43
TRIM38-201ENST00000357085 MED6O75586 246 aa6.09□□□□□ -1.43
TRIM38-201ENST00000357085 ZNF133P52736 654 aaPredicted RBP6.09□□□□□ -1.43
TRIM38-201ENST00000357085 FAM46AQ96IP4 442 aaKnown RBP6.09□□□□□ -1.43
TRIM38-201ENST00000357085 TCEAL2Q9H3H9 227 aaPredicted RBP6.09□□□□□ -1.43
TRIM38-201ENST00000357085 UCK1Q9HA47 277 aa6.09□□□□□ -1.43
TRIM38-201ENST00000357085 WDR45Q9Y484 360 aa6.09□□□□□ -1.43
TRIM38-201ENST00000357085 RLFQ13129 1914 aa6.09□□□□□ -1.43
TRIM38-201ENST00000357085 GAPDHP04406 335 aaKnown RBP6.09□□□□□ -1.43
TRIM38-201ENST00000357085 KLK1P06870 262 aa6.09□□□□□ -1.43
TRIM38-201ENST00000357085 IRS1P35568 1242 aa6.09□□□□□ -1.43
TRIM38-201ENST00000357085 SF1Q15637 639 aaKnown RBP6.09□□□□□ -1.43
TRIM38-201ENST00000357085 ZNF800Q2TB10 664 aaPredicted RBP eCLIP6.09□□□□□ -1.43
TRIM38-201ENST00000357085 PAQR6Q6TCH4 344 aa6.09□□□□□ -1.43
TRIM38-201ENST00000357085 ZBTB8AQ96BR9 441 aa6.09□□□□□ -1.43
TRIM38-201ENST00000357085 STACQ99469 402 aa6.09□□□□□ -1.43
TRIM38-201ENST00000357085 SDHAP31040 664 aa6.09□□□□□ -1.43
TRIM38-201ENST00000357085 VAMP2P63027 116 aa6.09□□□□□ -1.43
TRIM38-201ENST00000357085 LTBQ06643 244 aa6.09□□□□□ -1.43
TRIM38-201ENST00000357085 IQCJQ1A5X6 159 aa6.09□□□□□ -1.43
TRIM38-201ENST00000357085 FAM71E1Q6IPT2 247 aa6.09□□□□□ -1.43
TRIM38-201ENST00000357085 DPY19L2P2Q6ZN68 376 aa6.09□□□□□ -1.43
TRIM38-201ENST00000357085 SLC17A9Q9BYT1 436 aa6.09□□□□□ -1.43
TRIM38-201ENST00000357085 Q9N2J8 555 aa6.09□□□□□ -1.43
TRIM38-201ENST00000357085 IL26Q9NPH9 171 aa6.09□□□□□ -1.43
TRIM38-201ENST00000357085 EDDM13A0A1B0GTR0 161 aa6.09□□□□□ -1.44
TRIM38-201ENST00000357085 CLDN4O14493 209 aa6.09□□□□□ -1.44
TRIM38-201ENST00000357085 CYTIPO60759 359 aa6.09□□□□□ -1.44
TRIM38-201ENST00000357085 PRF1P14222 555 aa6.09□□□□□ -1.44
TRIM38-201ENST00000357085 NQO2P16083 231 aa6.09□□□□□ -1.44
TRIM38-201ENST00000357085 ANXA7P20073 488 aaKnown RBP6.09□□□□□ -1.44
TRIM38-201ENST00000357085 KCNJ3P48549 501 aa6.09□□□□□ -1.44
TRIM38-201ENST00000357085 CAV2P51636 162 aa6.09□□□□□ -1.44
TRIM38-201ENST00000357085 ZNF124Q15973 351 aa6.09□□□□□ -1.44
TRIM38-201ENST00000357085 ACOT6Q3I5F7 207 aaPredicted RBP6.09□□□□□ -1.44
TRIM38-201ENST00000357085 ZNF585AQ6P3V2 769 aa6.09□□□□□ -1.44
TRIM38-201ENST00000357085 DPPA4Q7L190 304 aa6.09□□□□□ -1.44
TRIM38-201ENST00000357085 OR2W3Q7Z3T1 314 aa6.09□□□□□ -1.44
TRIM38-201ENST00000357085 VRK3Q8IV63 474 aa6.09□□□□□ -1.44
TRIM38-201ENST00000357085 MRPS24Q96EL2 167 aaKnown RBP6.09□□□□□ -1.44
TRIM38-201ENST00000357085 GDF15Q99988 308 aa6.09□□□□□ -1.44
TRIM38-201ENST00000357085 UTP23Q9BRU9 249 aaKnown RBP6.09□□□□□ -1.44
TRIM38-201ENST00000357085 NMES1Q9C002 83 aa6.09□□□□□ -1.44
TRIM38-201ENST00000357085 CPA4Q9UI42 421 aa6.09□□□□□ -1.44
TRIM38-201ENST00000357085 OR10H2O60403 315 aa6.08□□□□□ -1.44
TRIM38-201ENST00000357085 SNRPBP14678 240 aaKnown RBP6.08□□□□□ -1.44
TRIM38-201ENST00000357085 NME1P15531 152 aaKnown RBP6.08□□□□□ -1.44
TRIM38-201ENST00000357085 HOXA11P31270 313 aaPredicted RBP6.08□□□□□ -1.44
TRIM38-201ENST00000357085 PBX2P40425 430 aa6.08□□□□□ -1.44
TRIM38-201ENST00000357085 ARRB1P49407 418 aaPredicted RBP6.08□□□□□ -1.44
TRIM38-201ENST00000357085 OR2B8PP59922 312 aa6.08□□□□□ -1.44
TRIM38-201ENST00000357085 SLC8B1Q6J4K2 584 aa6.08□□□□□ -1.44
TRIM38-201ENST00000357085 RGMBQ6NW40 437 aa6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 121.2 ms