RNA–Protein interactions for RNA: ENST00000357008.6

CHD4-201, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CHD4, Length 6,496 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-201ENST00000357008 PRAMEF27A3QJZ7 478 aa13.78□□□□□ -0.2
CHD4-201ENST00000357008 FAM227AF5H4B4 570 aa13.78□□□□□ -0.2
CHD4-201ENST00000357008 HLA-FP30511 346 aa13.78□□□□□ -0.2
CHD4-201ENST00000357008 CTBSQ01459 385 aa13.78□□□□□ -0.2
CHD4-201ENST00000357008 SCGB2A2Q13296 93 aa13.78□□□□□ -0.2
CHD4-201ENST00000357008 PRAMEF9Q5VWM5 478 aa13.78□□□□□ -0.2
CHD4-201ENST00000357008 SLC39A5Q6ZMH5 540 aa13.78□□□□□ -0.2
CHD4-201ENST00000357008 MOB3CQ70IA8 216 aa13.78□□□□□ -0.2
CHD4-201ENST00000357008 NANOGP1Q8N7R0 232 aa13.78□□□□□ -0.2
CHD4-201ENST00000357008 PLPP5Q8NEB5 264 aa13.78□□□□□ -0.2
CHD4-201ENST00000357008 LINC01599Q8WXQ3 324 aa13.78□□□□□ -0.2
CHD4-201ENST00000357008 MS4A8Q9BY19 250 aa13.78□□□□□ -0.2
CHD4-201ENST00000357008 TUBB1Q9H4B7 451 aa13.78□□□□□ -0.2
CHD4-201ENST00000357008 CREBZFQ9NS37 354 aa13.78□□□□□ -0.2
CHD4-201ENST00000357008 MYO18AQ92614 2054 aaKnown RBP13.78□□□□□ -0.2
CHD4-201ENST00000357008 A6NCN8 305 aa13.77□□□□□ -0.2
CHD4-201ENST00000357008 ALX3O95076 343 aa13.77□□□□□ -0.2
CHD4-201ENST00000357008 PIPP12273 146 aaPredicted RBP13.77□□□□□ -0.2
CHD4-201ENST00000357008 PVRP15151 417 aa13.77□□□□□ -0.2
CHD4-201ENST00000357008 NME2P22392 152 aa13.77□□□□□ -0.2
CHD4-201ENST00000357008 EEF1A1P68104 462 aaKnown RBP13.77□□□□□ -0.2
CHD4-201ENST00000357008 RPE65Q16518 533 aa13.77□□□□□ -0.2
CHD4-201ENST00000357008 ZMAT1Q5H9K5 638 aa13.77□□□□□ -0.2
CHD4-201ENST00000357008 TMEM200AQ86VY9 491 aa13.77□□□□□ -0.2
CHD4-201ENST00000357008 SLC25A46Q96AG3 418 aa13.77□□□□□ -0.2
CHD4-201ENST00000357008 TEX37Q96LM6 180 aa13.77□□□□□ -0.2
CHD4-201ENST00000357008 OCSTAMPQ9BR26 566 aa13.77□□□□□ -0.2
CHD4-201ENST00000357008 STEAP1Q9UHE8 339 aa13.77□□□□□ -0.2
CHD4-201ENST00000357008 MCTS1Q9ULC4 181 aaKnown RBP13.77□□□□□ -0.2
CHD4-201ENST00000357008 MPPED1O15442 326 aa13.77□□□□□ -0.2
CHD4-201ENST00000357008 DRD1P21728 446 aa13.77□□□□□ -0.2
CHD4-201ENST00000357008 ETV1P50549 477 aa13.77□□□□□ -0.2
CHD4-201ENST00000357008 RAB38P57729 211 aa13.77□□□□□ -0.2
CHD4-201ENST00000357008 SOHLH1Q5JUK2 328 aa13.77□□□□□ -0.2
CHD4-201ENST00000357008 RBMS3Q6XE24 437 aaKnown RBP13.77□□□□□ -0.2
CHD4-201ENST00000357008 SLC35D2Q76EJ3 337 aa13.77□□□□□ -0.2
CHD4-201ENST00000357008 KLHDC8BQ8IXV7 354 aa13.77□□□□□ -0.2
CHD4-201ENST00000357008 DNAJB11Q9UBS4 358 aa13.77□□□□□ -0.2
CHD4-201ENST00000357008 CCDC88AQ3V6T2 1871 aa13.77□□□□□ -0.2
CHD4-201ENST00000357008 F3P13726 295 aa13.77□□□□□ -0.21
CHD4-201ENST00000357008 XKR7Q5GH72 579 aa13.77□□□□□ -0.21
CHD4-201ENST00000357008 FRMD1Q8N878 549 aa13.77□□□□□ -0.21
CHD4-201ENST00000357008 FAM213BQ8TBF2 198 aa13.77□□□□□ -0.21
CHD4-201ENST00000357008 ZNF578Q96N58 590 aaPredicted RBP13.77□□□□□ -0.21
CHD4-201ENST00000357008 ULBP2Q9BZM5 246 aa13.77□□□□□ -0.21
CHD4-201ENST00000357008 GDE1Q9NZC3 331 aa13.77□□□□□ -0.21
CHD4-201ENST00000357008 CITO14578 2027 aa13.77□□□□□ -0.21
CHD4-201ENST00000357008 TPMTP51580 245 aa13.77□□□□□ -0.21
CHD4-201ENST00000357008 SRPXP78539 464 aa13.77□□□□□ -0.21
CHD4-201ENST00000357008 ASAH1Q13510 395 aa13.77□□□□□ -0.21
CHD4-201ENST00000357008 ALKBH1Q13686 389 aaKnown RBP13.77□□□□□ -0.21
CHD4-201ENST00000357008 DLEU7Q6UYE1 221 aa13.77□□□□□ -0.21
CHD4-201ENST00000357008 DPY19L2P2Q6ZN68 376 aa13.77□□□□□ -0.21
CHD4-201ENST00000357008 OR5L1Q8NGL2 311 aa13.77□□□□□ -0.21
CHD4-201ENST00000357008 MARC2Q969Z3 335 aa13.77□□□□□ -0.21
CHD4-201ENST00000357008 NMNAT3Q96T66 252 aa13.77□□□□□ -0.21
CHD4-201ENST00000357008 GSX2Q9BZM3 304 aa13.77□□□□□ -0.21
CHD4-201ENST00000357008 HAO2Q9NYQ3 351 aa13.77□□□□□ -0.21
CHD4-201ENST00000357008 NAV1Q8NEY1 1877 aa13.77□□□□□ -0.21
CHD4-201ENST00000357008 H0YGG7 62 aa13.77□□□□□ -0.21
CHD4-201ENST00000357008 ZNF780AO75290 641 aaPredicted RBP13.77□□□□□ -0.21
CHD4-201ENST00000357008 PDLIM3Q53GG5 364 aaPredicted RBP13.77□□□□□ -0.21
CHD4-201ENST00000357008 ZNF852Q6ZMS4 543 aa13.77□□□□□ -0.21
CHD4-201ENST00000357008 PIGCQ92535 297 aa13.77□□□□□ -0.21
CHD4-201ENST00000357008 BTF3L4Q96K17 158 aa13.77□□□□□ -0.21
CHD4-201ENST00000357008 HS3ST2Q9Y278 367 aa13.77□□□□□ -0.21
CHD4-201ENST00000357008 TMEM129A0AVI4 362 aa13.76□□□□□ -0.21
CHD4-201ENST00000357008 SERINC4A6NH21 518 aa13.76□□□□□ -0.21
CHD4-201ENST00000357008 RNF212BA8MTL3 300 aa13.76□□□□□ -0.21
CHD4-201ENST00000357008 TAPBPO15533 448 aa13.76□□□□□ -0.21
CHD4-201ENST00000357008 PAPD4Q6PIY7 484 aaKnown RBP13.76□□□□□ -0.21
CHD4-201ENST00000357008 GDF7Q7Z4P5 450 aa13.76□□□□□ -0.21
CHD4-201ENST00000357008 BCDIN3DQ7Z5W3 292 aaKnown RBP13.76□□□□□ -0.21
CHD4-201ENST00000357008 KDM8Q8N371 416 aa13.76□□□□□ -0.21
CHD4-201ENST00000357008 ENKD1Q9H0I2 346 aa13.76□□□□□ -0.21
CHD4-201ENST00000357008 FBXO8Q9NRD0 319 aa13.76□□□□□ -0.21
CHD4-201ENST00000357008 SMCO4Q9NRQ5 59 aa13.76□□□□□ -0.21
CHD4-201ENST00000357008 PCDHGA1Q9Y5H4 931 aa13.76□□□□□ -0.21
CHD4-201ENST00000357008 HMX2A2RU54 273 aa13.76□□□□□ -0.21
CHD4-201ENST00000357008 ANKRD34BA5PLL1 514 aa13.76□□□□□ -0.21
CHD4-201ENST00000357008 TRIM23P36406 574 aa13.76□□□□□ -0.21
CHD4-201ENST00000357008 MZT1Q08AG7 82 aa13.76□□□□□ -0.21
CHD4-201ENST00000357008 RDH10Q8IZV5 341 aa13.76□□□□□ -0.21
CHD4-201ENST00000357008 MMP21Q8N119 569 aa13.76□□□□□ -0.21
CHD4-201ENST00000357008 ZNF808Q8N4W9 903 aaPredicted RBP13.76□□□□□ -0.21
CHD4-201ENST00000357008 CHTF18Q8WVB6 975 aa13.76□□□□□ -0.21
CHD4-201ENST00000357008 PSMF1Q92530 271 aa13.76□□□□□ -0.21
CHD4-201ENST00000357008 TM4SF18Q96CE8 201 aa13.76□□□□□ -0.21
CHD4-201ENST00000357008 TSSK2Q96PF2 358 aa13.76□□□□□ -0.21
CHD4-201ENST00000357008 GNG13Q9P2W3 67 aa13.76□□□□□ -0.21
CHD4-201ENST00000357008 LRIT2A6NDA9 550 aa13.76□□□□□ -0.21
CHD4-201ENST00000357008 NUDT1P36639 197 aa13.76□□□□□ -0.21
CHD4-201ENST00000357008 REEP5Q00765 189 aa13.76□□□□□ -0.21
CHD4-201ENST00000357008 ZNF74Q16587 644 aa13.76□□□□□ -0.21
CHD4-201ENST00000357008 UBE2FQ969M7 185 aa13.76□□□□□ -0.21
CHD4-201ENST00000357008 AMDHD1Q96NU7 426 aa13.76□□□□□ -0.21
CHD4-201ENST00000357008 CLSTN3Q9BQT9 956 aa13.76□□□□□ -0.21
CHD4-201ENST00000357008 GLIPR2Q9H4G4 154 aa13.76□□□□□ -0.21
CHD4-201ENST00000357008 MUTYHQ9UIF7 546 aa13.76□□□□□ -0.21
CHD4-201ENST00000357008 CA5BQ9Y2D0 317 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms