RNA–Protein interactions for RNA: ENST00000355480.9

COL18A1-202, Transcript of collagen type XVIII alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL18A1, Length 5,924 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-202ENST00000355480 EPHX3Q9H6B9 360 aa16.7■□□□□ 0.26
COL18A1-202ENST00000355480 MED17Q9NVC6 651 aa16.7■□□□□ 0.26
COL18A1-202ENST00000355480 KIF25Q9UIL4 384 aa16.7■□□□□ 0.26
COL18A1-202ENST00000355480 SHHQ15465 462 aa16.7■□□□□ 0.26
COL18A1-202ENST00000355480 OR8B8Q15620 311 aa16.7■□□□□ 0.26
COL18A1-202ENST00000355480 SMN1Q16637 294 aaKnown RBP16.7■□□□□ 0.26
COL18A1-202ENST00000355480 BCL7AQ4VC05 210 aa16.7■□□□□ 0.26
COL18A1-202ENST00000355480 OR7G1Q8NGA0 311 aa16.7■□□□□ 0.26
COL18A1-202ENST00000355480 OR5D18Q8NGL1 313 aa16.7■□□□□ 0.26
COL18A1-202ENST00000355480 A0A1B0GWA3 101 aa16.7■□□□□ 0.26
COL18A1-202ENST00000355480 DOK2O60496 412 aa16.7■□□□□ 0.26
COL18A1-202ENST00000355480 MAKP20794 623 aa16.7■□□□□ 0.26
COL18A1-202ENST00000355480 GCAP28676 217 aa16.7■□□□□ 0.26
COL18A1-202ENST00000355480 MARCH3Q86UD3 253 aa16.7■□□□□ 0.26
COL18A1-202ENST00000355480 LILRA3Q8N6C8 439 aaPredicted RBP16.7■□□□□ 0.26
COL18A1-202ENST00000355480 ZFP90Q8TF47 636 aa16.7■□□□□ 0.26
COL18A1-202ENST00000355480 SSX4O60224 188 aa16.69■□□□□ 0.26
COL18A1-202ENST00000355480 PRAMEF4O60810 478 aa16.69■□□□□ 0.26
COL18A1-202ENST00000355480 GNB3P16520 340 aa16.69■□□□□ 0.26
COL18A1-202ENST00000355480 RAB6AP20340 208 aa16.69■□□□□ 0.26
COL18A1-202ENST00000355480 ZNF750Q32MQ0 723 aa16.69■□□□□ 0.26
COL18A1-202ENST00000355480 PDLIM3Q53GG5 364 aaPredicted RBP16.69■□□□□ 0.26
COL18A1-202ENST00000355480 CGB2Q6NT52 195 aa16.69■□□□□ 0.26
COL18A1-202ENST00000355480 B3GLCTQ6Y288 498 aa16.69■□□□□ 0.26
COL18A1-202ENST00000355480 ZNF767PQ75MW2 155 aa16.69■□□□□ 0.26
COL18A1-202ENST00000355480 FRMD1Q8N878 549 aa16.69■□□□□ 0.26
COL18A1-202ENST00000355480 C12orf49Q9H741 205 aa16.69■□□□□ 0.26
COL18A1-202ENST00000355480 HRASLSQ9HDD0 168 aa16.69■□□□□ 0.26
COL18A1-202ENST00000355480 RCE1Q9Y256 329 aa16.69■□□□□ 0.26
COL18A1-202ENST00000355480 FUOMA2VDF0 154 aa16.69■□□□□ 0.26
COL18A1-202ENST00000355480 RDH10Q8IZV5 341 aa16.69■□□□□ 0.26
COL18A1-202ENST00000355480 NOX4Q9NPH5 578 aa16.69■□□□□ 0.26
COL18A1-202ENST00000355480 C19orf12Q9NSK7 152 aa16.69■□□□□ 0.26
COL18A1-202ENST00000355480 USP22Q9UPT9 525 aa16.69■□□□□ 0.26
COL18A1-202ENST00000355480 MYH3P11055 1940 aa16.69■□□□□ 0.26
COL18A1-202ENST00000355480 GM2AP17900 193 aa16.69■□□□□ 0.26
COL18A1-202ENST00000355480 CSNK1G2P78368 415 aa16.69■□□□□ 0.26
COL18A1-202ENST00000355480 LINC00346Q8IVM7 164 aa16.69■□□□□ 0.26
COL18A1-202ENST00000355480 R3HDMLQ9H3Y0 253 aa16.69■□□□□ 0.26
COL18A1-202ENST00000355480 LIN7BQ9HAP6 207 aa16.69■□□□□ 0.26
COL18A1-202ENST00000355480 IL1AP01583 271 aa16.69■□□□□ 0.26
COL18A1-202ENST00000355480 EXT1Q16394 746 aa16.69■□□□□ 0.26
COL18A1-202ENST00000355480 CMPK2Q5EBM0 449 aa16.69■□□□□ 0.26
COL18A1-202ENST00000355480 SLC48A1Q6P1K1 146 aa16.69■□□□□ 0.26
COL18A1-202ENST00000355480 APOOLQ6UXV4 268 aa16.69■□□□□ 0.26
COL18A1-202ENST00000355480 H1FXQ92522 213 aaKnown RBP16.69■□□□□ 0.26
COL18A1-202ENST00000355480 ELSPBP1Q96BH3 223 aa16.69■□□□□ 0.26
COL18A1-202ENST00000355480 NKX3-1Q99801 234 aaPredicted RBP16.69■□□□□ 0.26
COL18A1-202ENST00000355480 WDR76Q9H967 626 aa16.69■□□□□ 0.26
COL18A1-202ENST00000355480 ATG4BQ9Y4P1 393 aa16.69■□□□□ 0.26
COL18A1-202ENST00000355480 A0A1W2PS29 197 aa16.69■□□□□ 0.26
COL18A1-202ENST00000355480 SNCAP37840 140 aa16.69■□□□□ 0.26
COL18A1-202ENST00000355480 CLVS2Q5SYC1 327 aa16.69■□□□□ 0.26
COL18A1-202ENST00000355480 ZNF454Q8N9F8 522 aa16.69■□□□□ 0.26
COL18A1-202ENST00000355480 WFDC5Q8TCV5 224 aa16.69■□□□□ 0.26
COL18A1-202ENST00000355480 NRG4Q8WWG1 115 aa16.69■□□□□ 0.26
COL18A1-202ENST00000355480 ELF4Q99607 663 aaPredicted RBP16.69■□□□□ 0.26
COL18A1-202ENST00000355480 OR2T7P0C7T2 308 aa16.68■□□□□ 0.26
COL18A1-202ENST00000355480 OR2T27Q8NH04 317 aa16.68■□□□□ 0.26
COL18A1-202ENST00000355480 DAZAP1Q96EP5 407 aaKnown RBP16.68■□□□□ 0.26
COL18A1-202ENST00000355480 MRPS28Q9Y2Q9 187 aaKnown RBP16.68■□□□□ 0.26
COL18A1-202ENST00000355480 PRAMEF25A6NGN4 478 aa16.68■□□□□ 0.26
COL18A1-202ENST00000355480 RAB4AP20338 218 aa16.68■□□□□ 0.26
COL18A1-202ENST00000355480 ZNF92Q03936 586 aa16.68■□□□□ 0.26
COL18A1-202ENST00000355480 TEX19Q8NA77 164 aa16.68■□□□□ 0.26
COL18A1-202ENST00000355480 RAB3CQ96E17 227 aa16.68■□□□□ 0.26
COL18A1-202ENST00000355480 RPS10P5Q9NQ39 176 aa16.68■□□□□ 0.26
COL18A1-202ENST00000355480 RFPL3O75679 317 aa16.68■□□□□ 0.26
COL18A1-202ENST00000355480 SLCO2B1O94956 709 aa16.68■□□□□ 0.26
COL18A1-202ENST00000355480 PTAFRP25105 342 aa16.68■□□□□ 0.26
COL18A1-202ENST00000355480 S100A7P31151 101 aa16.68■□□□□ 0.26
COL18A1-202ENST00000355480 HACD4Q5VWC8 232 aa16.68■□□□□ 0.26
COL18A1-202ENST00000355480 TMEM71Q6P5X7 295 aa16.68■□□□□ 0.26
COL18A1-202ENST00000355480 ABHD17CQ6PCB6 329 aa16.68■□□□□ 0.26
COL18A1-202ENST00000355480 SGPP1Q9BX95 441 aa16.68■□□□□ 0.26
COL18A1-202ENST00000355480 FAM234AQ9H0X4 552 aa16.68■□□□□ 0.26
COL18A1-202ENST00000355480 WASH6PQ9NQA3 447 aa16.68■□□□□ 0.26
COL18A1-202ENST00000355480 PGAP2Q9UHJ9 254 aa16.68■□□□□ 0.26
COL18A1-202ENST00000355480 CORINQ9Y5Q5 1042 aa16.68■□□□□ 0.26
COL18A1-202ENST00000355480 NXPH2O95156 264 aa16.68■□□□□ 0.26
COL18A1-202ENST00000355480 CHATP28329 748 aa16.68■□□□□ 0.26
COL18A1-202ENST00000355480 HTR2CP28335 458 aa16.68■□□□□ 0.26
COL18A1-202ENST00000355480 HEPHL1Q6MZM0 1159 aa16.68■□□□□ 0.26
COL18A1-202ENST00000355480 TMEM185AQ8NFB2 350 aa16.68■□□□□ 0.26
COL18A1-202ENST00000355480 THOC3Q96J01 351 aaKnown RBP16.68■□□□□ 0.26
COL18A1-202ENST00000355480 SELENOIQ9C0D9 397 aa16.68■□□□□ 0.26
COL18A1-202ENST00000355480 MBNL1Q9NR56 388 aaKnown RBP16.68■□□□□ 0.26
COL18A1-202ENST00000355480 PLCXD1Q9NUJ7 323 aa16.68■□□□□ 0.26
COL18A1-202ENST00000355480 GPR171O14626 319 aa16.68■□□□□ 0.26
COL18A1-202ENST00000355480 WNT11O96014 354 aa16.68■□□□□ 0.26
COL18A1-202ENST00000355480 HOXA1P49639 335 aaPredicted RBP16.68■□□□□ 0.26
COL18A1-202ENST00000355480 CLDN12P56749 244 aa16.68■□□□□ 0.26
COL18A1-202ENST00000355480 GPLD1P80108 840 aa16.68■□□□□ 0.26
COL18A1-202ENST00000355480 PAN3Q58A45 887 aaKnown RBP16.68■□□□□ 0.26
COL18A1-202ENST00000355480 TDHQ8IZJ6 230 aa16.68■□□□□ 0.26
COL18A1-202ENST00000355480 SLC37A2Q8TED4 501 aa16.68■□□□□ 0.26
COL18A1-202ENST00000355480 C6orf106Q9H6K1 298 aaPredicted RBP16.68■□□□□ 0.26
COL18A1-202ENST00000355480 IGHV3-20A0A0C4DH32 117 aa16.67■□□□□ 0.26
COL18A1-202ENST00000355480 hCG_1809904A0A1W2PP81 198 aa16.67■□□□□ 0.26
COL18A1-202ENST00000355480 A0A1W2PPE2 198 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms