RNA–Protein interactions for RNA: ENST00000353479.9

COL17A1-201, Transcript of collagen type XVII alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL17A1, Length 5,734 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-201ENST00000353479 DOK2O60496 412 aa13.72□□□□□ -0.21
COL17A1-201ENST00000353479 LSSP48449 732 aa13.72□□□□□ -0.21
COL17A1-201ENST00000353479 ENTHD1Q8IYW4 607 aa13.72□□□□□ -0.21
COL17A1-201ENST00000353479 CCDC32Q9BV29 185 aa13.72□□□□□ -0.21
COL17A1-201ENST00000353479 FER1L6Q2WGJ9 1857 aa13.72□□□□□ -0.21
COL17A1-201ENST00000353479 MEN1O00255 615 aa13.71□□□□□ -0.21
COL17A1-201ENST00000353479 ZNF585AQ6P3V2 769 aa13.71□□□□□ -0.21
COL17A1-201ENST00000353479 GRPEL2Q8TAA5 225 aa13.71□□□□□ -0.21
COL17A1-201ENST00000353479 CNRIP1Q96F85 164 aaPredicted RBP13.71□□□□□ -0.21
COL17A1-201ENST00000353479 SEMA4CQ9C0C4 833 aa13.71□□□□□ -0.21
COL17A1-201ENST00000353479 SMOC1Q9H4F8 434 aa13.71□□□□□ -0.21
COL17A1-201ENST00000353479 DYNLRB1Q9NP97 96 aa13.71□□□□□ -0.21
COL17A1-201ENST00000353479 ZNF223Q9UK11 482 aaPredicted RBP13.71□□□□□ -0.21
COL17A1-201ENST00000353479 ZNF281Q9Y2X9 895 aa13.71□□□□□ -0.21
COL17A1-201ENST00000353479 PCDHGA3Q9Y5H0 932 aa13.71□□□□□ -0.21
COL17A1-201ENST00000353479 SLC1A3P43003 542 aa13.71□□□□□ -0.21
COL17A1-201ENST00000353479 YBX1P67809 324 aaKnown RBP13.71□□□□□ -0.21
COL17A1-201ENST00000353479 DHRS4L2Q6PKH6 230 aa13.71□□□□□ -0.21
COL17A1-201ENST00000353479 STX12Q86Y82 276 aa13.71□□□□□ -0.21
COL17A1-201ENST00000353479 LRRC56Q8IYG6 542 aaPredicted RBP13.71□□□□□ -0.21
COL17A1-201ENST00000353479 TEX19Q8NA77 164 aa13.71□□□□□ -0.21
COL17A1-201ENST00000353479 TAS2R16Q9NYV7 291 aa13.71□□□□□ -0.21
COL17A1-201ENST00000353479 NLKQ9UBE8 527 aa13.71□□□□□ -0.21
COL17A1-201ENST00000353479 RFPL3O75679 317 aa13.71□□□□□ -0.21
COL17A1-201ENST00000353479 OR2J2O76002 312 aa13.71□□□□□ -0.21
COL17A1-201ENST00000353479 THBS1P07996 1170 aa13.71□□□□□ -0.21
COL17A1-201ENST00000353479 PPP5CP53041 499 aa13.71□□□□□ -0.21
COL17A1-201ENST00000353479 FXYD4P59646 89 aa13.71□□□□□ -0.21
COL17A1-201ENST00000353479 CCBE1Q6UXH8 406 aaPredicted RBP13.71□□□□□ -0.21
COL17A1-201ENST00000353479 H1FNTQ75WM6 255 aaPredicted RBP13.71□□□□□ -0.21
COL17A1-201ENST00000353479 ZNF511Q8NB15 262 aa13.71□□□□□ -0.21
COL17A1-201ENST00000353479 ABRACLQ9P1F3 81 aa13.71□□□□□ -0.21
COL17A1-201ENST00000353479 RASD1Q9Y272 281 aa13.71□□□□□ -0.21
COL17A1-201ENST00000353479 TMEM184BQ9Y519 407 aaPredicted RBP13.71□□□□□ -0.21
COL17A1-201ENST00000353479 CELA2BP08218 269 aaPredicted RBP13.71□□□□□ -0.22
COL17A1-201ENST00000353479 OR2T7P0C7T2 308 aa13.71□□□□□ -0.22
COL17A1-201ENST00000353479 RAC2P15153 192 aa13.71□□□□□ -0.22
COL17A1-201ENST00000353479 EVI2BP34910 448 aa13.71□□□□□ -0.22
COL17A1-201ENST00000353479 APOBEC1P41238 236 aaKnown RBP13.71□□□□□ -0.22
COL17A1-201ENST00000353479 ADARB1P78563 741 aaKnown RBP13.71□□□□□ -0.22
COL17A1-201ENST00000353479 ZNF813Q6ZN06 617 aa13.71□□□□□ -0.22
COL17A1-201ENST00000353479 OR2I1PQ8NGU4 316 aa13.71□□□□□ -0.22
COL17A1-201ENST00000353479 OR2T27Q8NH04 317 aa13.71□□□□□ -0.22
COL17A1-201ENST00000353479 DEFB127Q9H1M4 99 aa13.71□□□□□ -0.22
COL17A1-201ENST00000353479 UBQLN3Q9H347 655 aa13.71□□□□□ -0.22
COL17A1-201ENST00000353479 IKZF5Q9H5V7 419 aa13.71□□□□□ -0.22
COL17A1-201ENST00000353479 FOCADQ5VW36 1801 aa13.71□□□□□ -0.22
COL17A1-201ENST00000353479 MEIS3P1A6NDR6 274 aa13.71□□□□□ -0.22
COL17A1-201ENST00000353479 C4orf47A7E2U8 309 aa13.71□□□□□ -0.22
COL17A1-201ENST00000353479 SERPINA2P20848 420 aa13.71□□□□□ -0.22
COL17A1-201ENST00000353479 SLC36A2Q495M3 483 aa13.71□□□□□ -0.22
COL17A1-201ENST00000353479 EIF5AL1Q6IS14 154 aaKnown RBP13.71□□□□□ -0.22
COL17A1-201ENST00000353479 FNDC8Q8TC99 324 aa13.71□□□□□ -0.22
COL17A1-201ENST00000353479 SLC7A13Q8TCU3 470 aa13.71□□□□□ -0.22
COL17A1-201ENST00000353479 ZNF419Q96HQ0 510 aaPredicted RBP13.71□□□□□ -0.22
COL17A1-201ENST00000353479 WDR76Q9H967 626 aa13.71□□□□□ -0.22
COL17A1-201ENST00000353479 LRFN1Q9P244 771 aa13.71□□□□□ -0.22
COL17A1-201ENST00000353479 CHRNA9Q9UGM1 479 aa13.71□□□□□ -0.22
COL17A1-201ENST00000353479 A0A0A6YYD5 115 aa13.7□□□□□ -0.22
COL17A1-201ENST00000353479 A0A1B0GVC2 190 aa13.7□□□□□ -0.22
COL17A1-201ENST00000353479 A6NIN4 97 aa13.7□□□□□ -0.22
COL17A1-201ENST00000353479 ZNF587BE7ETH6 402 aa13.7□□□□□ -0.22
COL17A1-201ENST00000353479 GABRPO00591 440 aa13.7□□□□□ -0.22
COL17A1-201ENST00000353479 MOSPD3O75425 235 aa13.7□□□□□ -0.22
COL17A1-201ENST00000353479 Q96M85 177 aa13.7□□□□□ -0.22
COL17A1-201ENST00000353479 HSPB11Q9Y547 144 aa13.7□□□□□ -0.22
COL17A1-201ENST00000353479 GIMAP1-GIMAP5A0A087WTJ2 511 aa13.7□□□□□ -0.22
COL17A1-201ENST00000353479 MT-ATP6P00846 226 aa13.7□□□□□ -0.22
COL17A1-201ENST00000353479 IFNA7P01567 189 aa13.7□□□□□ -0.22
COL17A1-201ENST00000353479 DRD5P21918 477 aa13.7□□□□□ -0.22
COL17A1-201ENST00000353479 DEFB109BQ30KR1 87 aa13.7□□□□□ -0.22
COL17A1-201ENST00000353479 TOMM40LQ969M1 308 aa13.7□□□□□ -0.22
COL17A1-201ENST00000353479 GIMAP5Q96F15 307 aa13.7□□□□□ -0.22
COL17A1-201ENST00000353479 IP6K3Q96PC2 410 aa13.7□□□□□ -0.22
COL17A1-201ENST00000353479 MGAT4CQ9UBM8 478 aa13.7□□□□□ -0.22
COL17A1-201ENST00000353479 TUBGCP6Q96RT7 1819 aa13.7□□□□□ -0.22
COL17A1-201ENST00000353479 CDHR4A6H8M9 788 aa13.7□□□□□ -0.22
COL17A1-201ENST00000353479 IFNGR1P15260 489 aa13.7□□□□□ -0.22
COL17A1-201ENST00000353479 ATP1B3P54709 279 aa13.7□□□□□ -0.22
COL17A1-201ENST00000353479 MCCD1P59942 119 aaPredicted RBP13.7□□□□□ -0.22
COL17A1-201ENST00000353479 AGAP7PQ5VUJ5 663 aa13.7□□□□□ -0.22
COL17A1-201ENST00000353479 ZBTB8BQ8NAP8 495 aaPredicted RBP13.7□□□□□ -0.22
COL17A1-201ENST00000353479 AGAP4Q96P64 663 aa13.7□□□□□ -0.22
COL17A1-201ENST00000353479 PSORS1C1Q9UIG5 152 aa13.7□□□□□ -0.22
COL17A1-201ENST00000353479 A0A087WV62 115 aa13.7□□□□□ -0.22
COL17A1-201ENST00000353479 OTOL1A6NHN0 477 aaPredicted RBP13.7□□□□□ -0.22
COL17A1-201ENST00000353479 GPR171O14626 319 aa13.7□□□□□ -0.22
COL17A1-201ENST00000353479 IGHV3-9P01782 118 aa13.7□□□□□ -0.22
COL17A1-201ENST00000353479 OPRL1P41146 370 aa13.7□□□□□ -0.22
COL17A1-201ENST00000353479 DUSP8Q13202 625 aa13.7□□□□□ -0.22
COL17A1-201ENST00000353479 GNMTQ14749 295 aa13.7□□□□□ -0.22
COL17A1-201ENST00000353479 PPP1R35Q8TAP8 253 aa13.7□□□□□ -0.22
COL17A1-201ENST00000353479 GPBAR1Q8TDU6 330 aa13.7□□□□□ -0.22
COL17A1-201ENST00000353479 SLC25A43Q8WUT9 341 aaPredicted RBP13.7□□□□□ -0.22
COL17A1-201ENST00000353479 FSCN3Q9NQT6 498 aa13.7□□□□□ -0.22
COL17A1-201ENST00000353479 CTSFQ9UBX1 484 aa13.7□□□□□ -0.22
COL17A1-201ENST00000353479 ACOD1A6NK06 481 aa13.69□□□□□ -0.22
COL17A1-201ENST00000353479 CLDN24A6NM45 220 aa13.69□□□□□ -0.22
COL17A1-201ENST00000353479 PET100P0DJ07 73 aa13.69□□□□□ -0.22
COL17A1-201ENST00000353479 ZNF26P17031 533 aaPredicted RBP13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms