RNA–Protein interactions for RNA: ENST00000348987.4

SCARF1-202, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best) BASIC

Gene SCARF1, Length 2,619 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-202ENST00000348987 EIF3GO75821 320 aaKnown RBP eCLIP17.12■□□□□ 0.33
SCARF1-202ENST00000348987 ZIC2O95409 532 aaPredicted RBP17.12■□□□□ 0.33
SCARF1-202ENST00000348987 UBBP0CG47 229 aa17.12■□□□□ 0.33
SCARF1-202ENST00000348987 UBCP0CG48 685 aaKnown RBP17.12■□□□□ 0.33
SCARF1-202ENST00000348987 DRD3P35462 400 aa17.12■□□□□ 0.33
SCARF1-202ENST00000348987 BCL6P41182 706 aa17.12■□□□□ 0.33
SCARF1-202ENST00000348987 RPS27AP62979 156 aaKnown RBP17.12■□□□□ 0.33
SCARF1-202ENST00000348987 UBA52P62987 128 aaKnown RBP17.12■□□□□ 0.33
SCARF1-202ENST00000348987 CDK5R1Q15078 307 aa17.12■□□□□ 0.33
SCARF1-202ENST00000348987 TCEA2Q15560 299 aa17.12■□□□□ 0.33
SCARF1-202ENST00000348987 FAM78AQ5JUQ0 283 aa17.12■□□□□ 0.33
SCARF1-202ENST00000348987 ADAMTSL4Q6UY14 1074 aa17.12■□□□□ 0.33
SCARF1-202ENST00000348987 ZSCAN2Q7Z7L9 614 aaPredicted RBP17.12■□□□□ 0.33
SCARF1-202ENST00000348987 ZNF546Q86UE3 836 aa17.12■□□□□ 0.33
SCARF1-202ENST00000348987 LNX2Q8N448 690 aa17.12■□□□□ 0.33
SCARF1-202ENST00000348987 C12orf45Q8N5I9 185 aaPredicted RBP17.12■□□□□ 0.33
SCARF1-202ENST00000348987 SFT2D1Q8WV19 159 aa17.12■□□□□ 0.33
SCARF1-202ENST00000348987 HS6ST2Q96MM7 605 aa17.12■□□□□ 0.33
SCARF1-202ENST00000348987 MS4A4EQ96PG1 132 aa17.12■□□□□ 0.33
SCARF1-202ENST00000348987 PRSS16Q9NQE7 514 aa17.12■□□□□ 0.33
SCARF1-202ENST00000348987 CMC2Q9NRP2 79 aa17.12■□□□□ 0.33
SCARF1-202ENST00000348987 TRIOO75962 3097 aa17.12■□□□□ 0.33
SCARF1-202ENST00000348987 ERI3O43414 337 aaKnown RBP17.11■□□□□ 0.33
SCARF1-202ENST00000348987 LUMP51884 338 aaPredicted RBP17.11■□□□□ 0.33
SCARF1-202ENST00000348987 CRMP1Q14194 572 aa17.11■□□□□ 0.33
SCARF1-202ENST00000348987 SVBPQ8N300 66 aa17.11■□□□□ 0.33
SCARF1-202ENST00000348987 ZNF75AQ96N20 296 aa17.11■□□□□ 0.33
SCARF1-202ENST00000348987 TMEM185BQ9H7F4 350 aa17.11■□□□□ 0.33
SCARF1-202ENST00000348987 FKRPQ9H9S5 495 aa17.11■□□□□ 0.33
SCARF1-202ENST00000348987 PIN1P1O15428 100 aa17.11■□□□□ 0.33
SCARF1-202ENST00000348987 OGG1O15527 345 aa17.11■□□□□ 0.33
SCARF1-202ENST00000348987 PAK4O96013 591 aaPredicted RBP17.11■□□□□ 0.33
SCARF1-202ENST00000348987 ADCYAP1P18509 176 aa17.11■□□□□ 0.33
SCARF1-202ENST00000348987 ANXA11P50995 505 aaKnown RBP17.11■□□□□ 0.33
SCARF1-202ENST00000348987 SNRPNP63162 240 aaKnown RBP17.11■□□□□ 0.33
SCARF1-202ENST00000348987 PRDX1Q06830 199 aaKnown RBP17.11■□□□□ 0.33
SCARF1-202ENST00000348987 RBMS2Q15434 407 aaKnown RBP17.11■□□□□ 0.33
SCARF1-202ENST00000348987 CCDC157Q569K6 752 aa17.11■□□□□ 0.33
SCARF1-202ENST00000348987 SLC22A11Q9NSA0 550 aa17.11■□□□□ 0.33
SCARF1-202ENST00000348987 ZNF230Q9UIE0 474 aaPredicted RBP17.11■□□□□ 0.33
SCARF1-202ENST00000348987 TMEM218A2RU14 115 aa17.1■□□□□ 0.33
SCARF1-202ENST00000348987 ACOT7O00154 380 aa17.1■□□□□ 0.33
SCARF1-202ENST00000348987 TMIGD3P0DMS9 266 aaPredicted RBP17.1■□□□□ 0.33
SCARF1-202ENST00000348987 NTSP30990 170 aa17.1■□□□□ 0.33
SCARF1-202ENST00000348987 PSMB10P40306 273 aa17.1■□□□□ 0.33
SCARF1-202ENST00000348987 SIRPAP78324 504 aa17.1■□□□□ 0.33
SCARF1-202ENST00000348987 STX4Q12846 297 aa17.1■□□□□ 0.33
SCARF1-202ENST00000348987 SMAD2Q15796 467 aaKnown RBP17.1■□□□□ 0.33
SCARF1-202ENST00000348987 MICBQ29980 383 aa17.1■□□□□ 0.33
SCARF1-202ENST00000348987 PWWP2BQ6NUJ5 590 aa17.1■□□□□ 0.33
SCARF1-202ENST00000348987 OR14A16Q8NHC5 309 aa17.1■□□□□ 0.33
SCARF1-202ENST00000348987 SUSD6Q92537 303 aa17.1■□□□□ 0.33
SCARF1-202ENST00000348987 WSB2Q9NYS7 404 aaPredicted RBP17.1■□□□□ 0.33
SCARF1-202ENST00000348987 TRAV14DV4A0A0A6YYC5 116 aa17.1■□□□□ 0.33
SCARF1-202ENST00000348987 RFPL4AA6NLU0 287 aa17.1■□□□□ 0.33
SCARF1-202ENST00000348987 RFPL4AL1F8VTS6 287 aa17.1■□□□□ 0.33
SCARF1-202ENST00000348987 SULT1B1O43704 296 aa17.1■□□□□ 0.33
SCARF1-202ENST00000348987 NARSO43776 548 aaKnown RBP17.1■□□□□ 0.33
SCARF1-202ENST00000348987 ACAA1P09110 424 aaPredicted RBP17.1■□□□□ 0.33
SCARF1-202ENST00000348987 PCGF3Q3KNV8 242 aa17.1■□□□□ 0.33
SCARF1-202ENST00000348987 BEX5Q5H9J7 111 aa17.1■□□□□ 0.33
SCARF1-202ENST00000348987 WDR88Q6ZMY6 472 aa17.1■□□□□ 0.33
SCARF1-202ENST00000348987 ZNF600Q6ZNG1 722 aa17.1■□□□□ 0.33
SCARF1-202ENST00000348987 GLYATL2Q8WU03 294 aa17.1■□□□□ 0.33
SCARF1-202ENST00000348987 CHST6Q9GZX3 395 aa17.1■□□□□ 0.33
SCARF1-202ENST00000348987 C6orf106Q9H6K1 298 aaPredicted RBP17.1■□□□□ 0.33
SCARF1-202ENST00000348987 OR5V1Q9UGF6 321 aa17.1■□□□□ 0.33
SCARF1-202ENST00000348987 SGCEO43556 437 aa17.09■□□□□ 0.33
SCARF1-202ENST00000348987 F12P00748 615 aaPredicted RBP17.09■□□□□ 0.33
SCARF1-202ENST00000348987 FABP1P07148 127 aa17.09■□□□□ 0.33
SCARF1-202ENST00000348987 EDNRAP25101 427 aa17.09■□□□□ 0.33
SCARF1-202ENST00000348987 RORAP35398 523 aa17.09■□□□□ 0.33
SCARF1-202ENST00000348987 PDX1P52945 283 aa17.09■□□□□ 0.33
SCARF1-202ENST00000348987 OR51L1Q8NGJ5 315 aa17.09■□□□□ 0.33
SCARF1-202ENST00000348987 OR4C16Q8NGL9 310 aa17.09■□□□□ 0.33
SCARF1-202ENST00000348987 OR1S2Q8NGQ3 325 aa17.09■□□□□ 0.33
SCARF1-202ENST00000348987 CRB3Q9BUF7 120 aa17.09■□□□□ 0.33
SCARF1-202ENST00000348987 MFRPQ9BY79 579 aa17.09■□□□□ 0.33
SCARF1-202ENST00000348987 SCN3AQ9NY46 2000 aa17.09■□□□□ 0.33
SCARF1-202ENST00000348987 RPN2P04844 631 aa17.09■□□□□ 0.33
SCARF1-202ENST00000348987 CRYBA1P05813 215 aa17.09■□□□□ 0.33
SCARF1-202ENST00000348987 SLC2A5P22732 501 aa17.09■□□□□ 0.33
SCARF1-202ENST00000348987 CERS1P27544 350 aa17.09■□□□□ 0.33
SCARF1-202ENST00000348987 TAS2R20P59543 309 aa17.09■□□□□ 0.33
SCARF1-202ENST00000348987 NDUFAF6Q330K2 333 aa17.09■□□□□ 0.33
SCARF1-202ENST00000348987 C4orf46Q504U0 113 aa17.09■□□□□ 0.33
SCARF1-202ENST00000348987 SLC16A13Q7RTY0 426 aa17.09■□□□□ 0.33
SCARF1-202ENST00000348987 OR2W3Q7Z3T1 314 aa17.09■□□□□ 0.33
SCARF1-202ENST00000348987 ACOT4Q8N9L9 421 aa17.09■□□□□ 0.33
SCARF1-202ENST00000348987 OR13C2Q8NGS9 318 aa17.09■□□□□ 0.33
SCARF1-202ENST00000348987 ZMYND19Q96E35 227 aaPredicted RBP17.09■□□□□ 0.33
SCARF1-202ENST00000348987 PRSS27Q9BQR3 290 aa17.09■□□□□ 0.33
SCARF1-202ENST00000348987 PIGMQ9H3S5 423 aa17.09■□□□□ 0.33
SCARF1-202ENST00000348987 CACYBPQ9HB71 228 aaKnown RBP17.09■□□□□ 0.33
SCARF1-202ENST00000348987 KRCC1Q9NPI7 259 aaPredicted RBP17.09■□□□□ 0.33
SCARF1-202ENST00000348987 GNG8Q9UK08 70 aa17.09■□□□□ 0.33
SCARF1-202ENST00000348987 PCDHB10Q9UN67 800 aa17.09■□□□□ 0.33
SCARF1-202ENST00000348987 SPEGQ15772 3267 aa17.08■□□□□ 0.33
SCARF1-202ENST00000348987 ZNF879B4DU55 563 aa17.08■□□□□ 0.33
SCARF1-202ENST00000348987 AKR7A3O95154 331 aa17.08■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms