RNA–Protein interactions for RNA: ENST00000348165.9

UBE3C-201, Transcript of ubiquitin protein ligase E3C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE3C, Length 5,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3C-201ENST00000348165 PTRH1Q86Y79 214 aaKnown RBP17.2■□□□□ 0.34
UBE3C-201ENST00000348165 LINC00346Q8IVM7 164 aa17.2■□□□□ 0.34
UBE3C-201ENST00000348165 KDM8Q8N371 416 aa17.2■□□□□ 0.34
UBE3C-201ENST00000348165 BRIX1Q8TDN6 353 aaKnown RBP17.2■□□□□ 0.34
UBE3C-201ENST00000348165 MED17Q9NVC6 651 aa17.2■□□□□ 0.34
UBE3C-201ENST00000348165 B3GNT2Q9NY97 397 aa17.2■□□□□ 0.34
UBE3C-201ENST00000348165 PCDHGA1Q9Y5H4 931 aa17.2■□□□□ 0.34
UBE3C-201ENST00000348165 MEIOCA2RUB1 952 aa17.2■□□□□ 0.34
UBE3C-201ENST00000348165 TMPRSS11DO60235 418 aa17.2■□□□□ 0.34
UBE3C-201ENST00000348165 SRFP11831 508 aa17.2■□□□□ 0.34
UBE3C-201ENST00000348165 RPS2P15880 293 aaKnown RBP17.2■□□□□ 0.34
UBE3C-201ENST00000348165 ESPNLQ6ZVH7 1005 aa17.2■□□□□ 0.34
UBE3C-201ENST00000348165 FAM83FQ8NEG4 500 aaPredicted RBP17.2■□□□□ 0.34
UBE3C-201ENST00000348165 GHSRQ92847 366 aa17.2■□□□□ 0.34
UBE3C-201ENST00000348165 ZNF582Q96NG8 517 aaPredicted RBP17.2■□□□□ 0.34
UBE3C-201ENST00000348165 SSX3Q99909 188 aa17.2■□□□□ 0.34
UBE3C-201ENST00000348165 KCND3Q9UK17 655 aa17.2■□□□□ 0.34
UBE3C-201ENST00000348165 MED16Q9Y2X0 877 aa17.2■□□□□ 0.34
UBE3C-201ENST00000348165 TARM1B6A8C7 271 aa17.19■□□□□ 0.34
UBE3C-201ENST00000348165 TFP02787 698 aa17.19■□□□□ 0.34
UBE3C-201ENST00000348165 TNFSF4P23510 183 aa17.19■□□□□ 0.34
UBE3C-201ENST00000348165 CDK2P24941 298 aa17.19■□□□□ 0.34
UBE3C-201ENST00000348165 LTBQ06643 244 aa17.19■□□□□ 0.34
UBE3C-201ENST00000348165 EXOSC6Q5RKV6 272 aaKnown RBP17.19■□□□□ 0.34
UBE3C-201ENST00000348165 FOXRED1Q96CU9 486 aaPredicted RBP17.19■□□□□ 0.34
UBE3C-201ENST00000348165 HRASLS5Q96KN8 279 aa17.19■□□□□ 0.34
UBE3C-201ENST00000348165 OR14J1Q9UGF5 321 aa17.19■□□□□ 0.34
UBE3C-201ENST00000348165 A0A1W2PQ09 198 aa17.19■□□□□ 0.34
UBE3C-201ENST00000348165 GPRIN2O60269 458 aa17.19■□□□□ 0.34
UBE3C-201ENST00000348165 TEAD1P28347 426 aa17.19■□□□□ 0.34
UBE3C-201ENST00000348165 PLGLAQ15195 96 aa17.19■□□□□ 0.34
UBE3C-201ENST00000348165 SF3A2Q15428 464 aaKnown RBP17.19■□□□□ 0.34
UBE3C-201ENST00000348165 SSX2Q16385 188 aa17.19■□□□□ 0.34
UBE3C-201ENST00000348165 METTL11BQ5VVY1 283 aa17.19■□□□□ 0.34
UBE3C-201ENST00000348165 DLEU7Q6UYE1 221 aa17.19■□□□□ 0.34
UBE3C-201ENST00000348165 PRICKLE2Q7Z3G6 844 aa17.19■□□□□ 0.34
UBE3C-201ENST00000348165 RPS19BP1Q86WX3 136 aaKnown RBP17.19■□□□□ 0.34
UBE3C-201ENST00000348165 CD300AQ9UGN4 299 aa17.19■□□□□ 0.34
UBE3C-201ENST00000348165 LCMT2O60294 686 aaKnown RBP17.19■□□□□ 0.34
UBE3C-201ENST00000348165 IL1AP01583 271 aa17.19■□□□□ 0.34
UBE3C-201ENST00000348165 CTSLP07711 333 aa17.19■□□□□ 0.34
UBE3C-201ENST00000348165 CARD18P57730 90 aa17.19■□□□□ 0.34
UBE3C-201ENST00000348165 VWA2Q5GFL6 755 aa17.19■□□□□ 0.34
UBE3C-201ENST00000348165 CDCP1Q9H5V8 836 aa17.19■□□□□ 0.34
UBE3C-201ENST00000348165 LYRM4Q9HD34 91 aa17.19■□□□□ 0.34
UBE3C-201ENST00000348165 ATP13A2Q9NQ11 1180 aa17.19■□□□□ 0.34
UBE3C-201ENST00000348165 B3GALNT1O75752 331 aa17.19■□□□□ 0.34
UBE3C-201ENST00000348165 ZNF26P17031 533 aaPredicted RBP17.19■□□□□ 0.34
UBE3C-201ENST00000348165 CTGFP29279 349 aa17.19■□□□□ 0.34
UBE3C-201ENST00000348165 DYNLRB1Q9NP97 96 aa17.19■□□□□ 0.34
UBE3C-201ENST00000348165 MPPED1O15442 326 aa17.18■□□□□ 0.34
UBE3C-201ENST00000348165 OR7C1O76099 320 aaPredicted RBP17.18■□□□□ 0.34
UBE3C-201ENST00000348165 MT-ND4P03905 459 aa17.18■□□□□ 0.34
UBE3C-201ENST00000348165 OR2T7P0C7T2 308 aa17.18■□□□□ 0.34
UBE3C-201ENST00000348165 GIFP27352 417 aa17.18■□□□□ 0.34
UBE3C-201ENST00000348165 SLC6A12P48065 614 aa17.18■□□□□ 0.34
UBE3C-201ENST00000348165 SMAD4Q13485 552 aaKnown RBP17.18■□□□□ 0.34
UBE3C-201ENST00000348165 ZNF836Q6ZNA1 936 aa17.18■□□□□ 0.34
UBE3C-201ENST00000348165 LILRB2Q8N423 598 aa17.18■□□□□ 0.34
UBE3C-201ENST00000348165 OR2T27Q8NH04 317 aa17.18■□□□□ 0.34
UBE3C-201ENST00000348165 TMEM106AQ96A25 262 aa17.18■□□□□ 0.34
UBE3C-201ENST00000348165 NT5DC2Q9H857 520 aa17.18■□□□□ 0.34
UBE3C-201ENST00000348165 PIGBOS1A0A0B4J2F0 54 aa17.18■□□□□ 0.34
UBE3C-201ENST00000348165 NAP1L6A6NFF2 107 aa17.18■□□□□ 0.34
UBE3C-201ENST00000348165 B4DXG7 233 aa17.18■□□□□ 0.34
UBE3C-201ENST00000348165 TRAPPC2LH3BP13 241 aa17.18■□□□□ 0.34
UBE3C-201ENST00000348165 EFNA3P52797 238 aa17.18■□□□□ 0.34
UBE3C-201ENST00000348165 RBPJQ06330 500 aa17.18■□□□□ 0.34
UBE3C-201ENST00000348165 C5orf46Q6UWT4 87 aa17.18■□□□□ 0.34
UBE3C-201ENST00000348165 OR5D18Q8NGL1 313 aa17.18■□□□□ 0.34
UBE3C-201ENST00000348165 ELMOD3Q96FG2 381 aa17.18■□□□□ 0.34
UBE3C-201ENST00000348165 PSORS1C1Q9UIG5 152 aa17.18■□□□□ 0.34
UBE3C-201ENST00000348165 GAAP10253 952 aa17.18■□□□□ 0.34
UBE3C-201ENST00000348165 UBE2FQ969M7 185 aa17.18■□□□□ 0.34
UBE3C-201ENST00000348165 RSPRY1Q96DX4 576 aa17.18■□□□□ 0.34
UBE3C-201ENST00000348165 PIP5K1CO60331 668 aa17.18■□□□□ 0.34
UBE3C-201ENST00000348165 CBX7O95931 251 aa17.18■□□□□ 0.34
UBE3C-201ENST00000348165 CD14P08571 375 aa17.18■□□□□ 0.34
UBE3C-201ENST00000348165 SNRPBP14678 240 aaKnown RBP17.18■□□□□ 0.34
UBE3C-201ENST00000348165 RPS25P62851 125 aaKnown RBP17.18■□□□□ 0.34
UBE3C-201ENST00000348165 MRPS10P82664 201 aaKnown RBP17.18■□□□□ 0.34
UBE3C-201ENST00000348165 ENTHD1Q8IYW4 607 aa17.18■□□□□ 0.34
UBE3C-201ENST00000348165 OR4K15Q8NH41 348 aa17.18■□□□□ 0.34
UBE3C-201ENST00000348165 NICN1Q9BSH3 213 aa17.18■□□□□ 0.34
UBE3C-201ENST00000348165 OLAHQ9NV23 265 aa17.18■□□□□ 0.34
UBE3C-201ENST00000348165 PCDHB10Q9UN67 800 aa17.18■□□□□ 0.34
UBE3C-201ENST00000348165 MOKQ9UQ07 419 aa17.18■□□□□ 0.34
UBE3C-201ENST00000348165 DDX60LQ5H9U9 1706 aaKnown RBP17.18■□□□□ 0.34
UBE3C-201ENST00000348165 CDHR4A6H8M9 788 aa17.17■□□□□ 0.34
UBE3C-201ENST00000348165 GMDSO60547 372 aa17.17■□□□□ 0.34
UBE3C-201ENST00000348165 DNAJB6O75190 326 aa17.17■□□□□ 0.34
UBE3C-201ENST00000348165 ELAVL1Q15717 326 aaKnown RBP17.17■□□□□ 0.34
UBE3C-201ENST00000348165 CORINQ9Y5Q5 1042 aa17.17■□□□□ 0.34
UBE3C-201ENST00000348165 OTOL1A6NHN0 477 aaPredicted RBP17.17■□□□□ 0.34
UBE3C-201ENST00000348165 FGF17O60258 216 aa17.17■□□□□ 0.34
UBE3C-201ENST00000348165 TRIM23P36406 574 aa17.17■□□□□ 0.34
UBE3C-201ENST00000348165 CAMLGP49069 296 aa17.17■□□□□ 0.34
UBE3C-201ENST00000348165 CYB561P49447 251 aa17.17■□□□□ 0.34
UBE3C-201ENST00000348165 NXNL2Q5VZ03 156 aa17.17■□□□□ 0.34
UBE3C-201ENST00000348165 SLC7A13Q8TCU3 470 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms