RNA–Protein interactions for RNA: ENST00000346213.8

RAB5C-201, Transcript of RAB5C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB5C, Length 1,671 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-201ENST00000346213 SORDQ00796 357 aa14.3□□□□□ -0.12
RAB5C-201ENST00000346213 SELENBP1Q13228 472 aa14.3□□□□□ -0.12
RAB5C-201ENST00000346213 POU4F3Q15319 338 aa14.3□□□□□ -0.12
RAB5C-201ENST00000346213 TESK1Q15569 626 aa14.3□□□□□ -0.12
RAB5C-201ENST00000346213 KCTD21Q4G0X4 260 aa14.3□□□□□ -0.12
RAB5C-201ENST00000346213 TTC33Q6PID6 262 aaPredicted RBP14.3□□□□□ -0.12
RAB5C-201ENST00000346213 CHMP1BQ7LBR1 199 aa14.3□□□□□ -0.12
RAB5C-201ENST00000346213 ZC3HAV1Q7Z2W4 902 aaKnown RBP14.3□□□□□ -0.12
RAB5C-201ENST00000346213 ADGRG3Q86Y34 549 aa14.3□□□□□ -0.12
RAB5C-201ENST00000346213 OFCC1Q8IZS5 231 aa14.3□□□□□ -0.12
RAB5C-201ENST00000346213 PROX1Q92786 737 aa14.3□□□□□ -0.12
RAB5C-201ENST00000346213 MUS81Q96NY9 551 aa14.3□□□□□ -0.12
RAB5C-201ENST00000346213 PIP5K1AQ99755 562 aa14.3□□□□□ -0.12
RAB5C-201ENST00000346213 PIGMQ9H3S5 423 aa14.3□□□□□ -0.12
RAB5C-201ENST00000346213 CALML5Q9NZT1 146 aa14.3□□□□□ -0.12
RAB5C-201ENST00000346213 FAM32AQ9Y421 112 aaKnown RBP14.3□□□□□ -0.12
RAB5C-201ENST00000346213 TESMINQ9Y4I5 508 aa14.3□□□□□ -0.12
RAB5C-201ENST00000346213 HIVEP1P15822 2718 aa14.3□□□□□ -0.12
RAB5C-201ENST00000346213 TRIM64A6NGJ6 449 aa14.3□□□□□ -0.12
RAB5C-201ENST00000346213 TUBAL3A6NHL2 446 aa14.3□□□□□ -0.12
RAB5C-201ENST00000346213 CD8BP10966 210 aa14.3□□□□□ -0.12
RAB5C-201ENST00000346213 CDH2P19022 906 aaPredicted RBP14.3□□□□□ -0.12
RAB5C-201ENST00000346213 LOXP28300 417 aaPredicted RBP14.3□□□□□ -0.12
RAB5C-201ENST00000346213 CARD18P57730 90 aa14.3□□□□□ -0.12
RAB5C-201ENST00000346213 HOXC5Q00444 222 aa14.3□□□□□ -0.12
RAB5C-201ENST00000346213 SPIBQ01892 262 aa14.3□□□□□ -0.12
RAB5C-201ENST00000346213 LAPTM4AQ15012 233 aa14.3□□□□□ -0.12
RAB5C-201ENST00000346213 OR2A2Q6IF42 318 aa14.3□□□□□ -0.12
RAB5C-201ENST00000346213 CDH24Q86UP0 819 aa14.3□□□□□ -0.12
RAB5C-201ENST00000346213 TUSC5Q8IXB3 177 aa14.3□□□□□ -0.12
RAB5C-201ENST00000346213 PIK3C3Q8NEB9 887 aa14.3□□□□□ -0.12
RAB5C-201ENST00000346213 GIPC3Q8TF64 312 aa14.3□□□□□ -0.12
RAB5C-201ENST00000346213 ST8SIA1Q92185 356 aa14.3□□□□□ -0.12
RAB5C-201ENST00000346213 WFIKKN1Q96NZ8 548 aa14.3□□□□□ -0.12
RAB5C-201ENST00000346213 C12orf49Q9H741 205 aa14.3□□□□□ -0.12
RAB5C-201ENST00000346213 EXOSC3Q9NQT5 275 aaKnown RBP14.3□□□□□ -0.12
RAB5C-201ENST00000346213 KLHL28Q9NXS3 571 aa14.3□□□□□ -0.12
RAB5C-201ENST00000346213 SLC35A3Q9Y2D2 325 aa14.3□□□□□ -0.12
RAB5C-201ENST00000346213 ANKRD17O75179 2603 aaKnown RBP14.29□□□□□ -0.12
RAB5C-201ENST00000346213 LOC100130705A0A1B0GUX0 176 aa14.29□□□□□ -0.12
RAB5C-201ENST00000346213 CDHR4A6H8M9 788 aa14.29□□□□□ -0.12
RAB5C-201ENST00000346213 CLPTM1O96005 669 aa14.29□□□□□ -0.12
RAB5C-201ENST00000346213 TFAP2AP05549 437 aa14.29□□□□□ -0.12
RAB5C-201ENST00000346213 THBDP07204 575 aa14.29□□□□□ -0.12
RAB5C-201ENST00000346213 CCNA2P20248 432 aa14.29□□□□□ -0.12
RAB5C-201ENST00000346213 PAX7P23759 505 aa14.29□□□□□ -0.12
RAB5C-201ENST00000346213 LIMS1P48059 325 aa14.29□□□□□ -0.12
RAB5C-201ENST00000346213 IDH2P48735 452 aaKnown RBP14.29□□□□□ -0.12
RAB5C-201ENST00000346213 RPS6KA3P51812 740 aa14.29□□□□□ -0.12
RAB5C-201ENST00000346213 IL18R1Q13478 541 aa14.29□□□□□ -0.12
RAB5C-201ENST00000346213 DAZAP2Q15038 168 aaPredicted RBP14.29□□□□□ -0.12
RAB5C-201ENST00000346213 TSC22D1Q15714 1073 aa14.29□□□□□ -0.12
RAB5C-201ENST00000346213 THAP5Q7Z6K1 395 aa14.29□□□□□ -0.12
RAB5C-201ENST00000346213 C8orf59Q8N0T1 100 aaPredicted RBP14.29□□□□□ -0.12
RAB5C-201ENST00000346213 ZNF786Q8N393 782 aa14.29□□□□□ -0.12
RAB5C-201ENST00000346213 TSPAN14Q8NG11 270 aa14.29□□□□□ -0.12
RAB5C-201ENST00000346213 FAM222BQ8WU58 562 aa14.29□□□□□ -0.12
RAB5C-201ENST00000346213 ZNF775Q96BV0 537 aaPredicted RBP14.29□□□□□ -0.12
RAB5C-201ENST00000346213 GMPPAQ96IJ6 420 aaPredicted RBP14.29□□□□□ -0.12
RAB5C-201ENST00000346213 OR5B2Q96R09 309 aa14.29□□□□□ -0.12
RAB5C-201ENST00000346213 PSD2Q9BQI7 771 aa14.29□□□□□ -0.12
RAB5C-201ENST00000346213 FAM192AQ9GZU8 254 aa14.29□□□□□ -0.12
RAB5C-201ENST00000346213 OSGIN1Q9UJX0 560 aa14.29□□□□□ -0.12
RAB5C-201ENST00000346213 ZNF443Q9Y2A4 671 aaPredicted RBP14.29□□□□□ -0.12
RAB5C-201ENST00000346213 TMEM72A0PK05 275 aa14.28□□□□□ -0.12
RAB5C-201ENST00000346213 SH3D21A4FU49 640 aa14.28□□□□□ -0.12
RAB5C-201ENST00000346213 DEFB108AA8MXU0 73 aa14.28□□□□□ -0.12
RAB5C-201ENST00000346213 J3KTA2 159 aa14.28□□□□□ -0.12
RAB5C-201ENST00000346213 MITFO75030 526 aaPredicted RBP14.28□□□□□ -0.12
RAB5C-201ENST00000346213 HRGP04196 525 aa14.28□□□□□ -0.12
RAB5C-201ENST00000346213 EPXP11678 715 aa14.28□□□□□ -0.12
RAB5C-201ENST00000346213 PGCP20142 388 aa14.28□□□□□ -0.12
RAB5C-201ENST00000346213 UGT2B10P36537 528 aa14.28□□□□□ -0.12
RAB5C-201ENST00000346213 CD79BP40259 229 aa14.28□□□□□ -0.12
RAB5C-201ENST00000346213 RPL5P46777 297 aaKnown RBP14.28□□□□□ -0.12
RAB5C-201ENST00000346213 YAP1P46937 504 aaKnown RBP14.28□□□□□ -0.12
RAB5C-201ENST00000346213 CDH12P55289 794 aa14.28□□□□□ -0.12
RAB5C-201ENST00000346213 HPCAP84074 193 aa14.28□□□□□ -0.12
RAB5C-201ENST00000346213 MICAQ29983 383 aa14.28□□□□□ -0.12
RAB5C-201ENST00000346213 EXOC3L2Q2M3D2 409 aa14.28□□□□□ -0.12
RAB5C-201ENST00000346213 C3orf33Q6P1S2 294 aa14.28□□□□□ -0.12
RAB5C-201ENST00000346213 CDC20BQ86Y33 519 aa14.28□□□□□ -0.12
RAB5C-201ENST00000346213 ATG16L2Q8NAA4 619 aa14.28□□□□□ -0.12
RAB5C-201ENST00000346213 OR52P1PQ8NH57 321 aa14.28□□□□□ -0.12
RAB5C-201ENST00000346213 HS3ST6Q96QI5 342 aa14.28□□□□□ -0.12
RAB5C-201ENST00000346213 MTHFD2LQ9H903 347 aaPredicted RBP14.28□□□□□ -0.12
RAB5C-201ENST00000346213 PLSCR4Q9NRQ2 329 aa14.28□□□□□ -0.12
RAB5C-201ENST00000346213 KRT84Q9NSB2 600 aa14.28□□□□□ -0.12
RAB5C-201ENST00000346213 ST6GALNAC1Q9NSC7 600 aaPredicted RBP14.28□□□□□ -0.12
RAB5C-201ENST00000346213 ETAA1Q9NY74 926 aa14.28□□□□□ -0.12
RAB5C-201ENST00000346213 KIF17Q9P2E2 1029 aa14.28□□□□□ -0.12
RAB5C-201ENST00000346213 FOXD3Q9UJU5 478 aaPredicted RBP14.28□□□□□ -0.12
RAB5C-201ENST00000346213 GADD45GO95257 159 aa14.27□□□□□ -0.12
RAB5C-201ENST00000346213 IMPDH2P12268 514 aa14.27□□□□□ -0.12
RAB5C-201ENST00000346213 ANXA8P13928 327 aa14.27□□□□□ -0.12
RAB5C-201ENST00000346213 DIO1P49895 249 aa14.27□□□□□ -0.12
RAB5C-201ENST00000346213 TUBA4AP68366 448 aa14.27□□□□□ -0.12
RAB5C-201ENST00000346213 LIN52Q52LA3 116 aa14.27□□□□□ -0.12
RAB5C-201ENST00000346213 SYT14P1Q58G82 188 aa14.27□□□□□ -0.12
RAB5C-201ENST00000346213 ZNF691Q5VV52 312 aa14.27□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms