RNA–Protein interactions for RNA: ENST00000345662.5

SPAST-202, Transcript of spastin, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SPAST, Length 5,116 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-202ENST00000345662 EEF1A1P5Q5VTE0 462 aa16.21■□□□□ 0.19
SPAST-202ENST00000345662 ZNF425Q6IV72 752 aa16.21■□□□□ 0.19
SPAST-202ENST00000345662 ALKAL1Q6UXT8 129 aa16.21■□□□□ 0.19
SPAST-202ENST00000345662 PLPP5Q8NEB5 264 aa16.21■□□□□ 0.19
SPAST-202ENST00000345662 OR1M1Q8NGA1 313 aa16.21■□□□□ 0.19
SPAST-202ENST00000345662 OR51D1Q8NGF3 324 aa16.21■□□□□ 0.19
SPAST-202ENST00000345662 RAB39BQ96DA2 213 aa16.21■□□□□ 0.19
SPAST-202ENST00000345662 SLC41A2Q96JW4 573 aa16.21■□□□□ 0.19
SPAST-202ENST00000345662 ZNF681Q96N22 645 aa16.21■□□□□ 0.19
SPAST-202ENST00000345662 RTP3Q9BQQ7 232 aa16.21■□□□□ 0.19
SPAST-202ENST00000345662 POFUT1Q9H488 388 aa16.21■□□□□ 0.19
SPAST-202ENST00000345662 DNAJC25-GNG10A0A024R161 153 aa16.21■□□□□ 0.19
SPAST-202ENST00000345662 OR52A4PA6NMU1 304 aa16.21■□□□□ 0.19
SPAST-202ENST00000345662 C1SP09871 688 aa16.21■□□□□ 0.19
SPAST-202ENST00000345662 PSMB5P28074 263 aa16.21■□□□□ 0.19
SPAST-202ENST00000345662 CST6Q15828 149 aa16.21■□□□□ 0.19
SPAST-202ENST00000345662 TMEM41BQ5BJD5 291 aa16.21■□□□□ 0.19
SPAST-202ENST00000345662 CLLU1Q5K131 121 aa16.21■□□□□ 0.19
SPAST-202ENST00000345662 CLRN3Q8NCR9 226 aa16.21■□□□□ 0.19
SPAST-202ENST00000345662 MED18Q9BUE0 208 aa16.21■□□□□ 0.19
SPAST-202ENST00000345662 RAC2P15153 192 aa16.21■□□□□ 0.18
SPAST-202ENST00000345662 FASLGP48023 281 aa16.21■□□□□ 0.18
SPAST-202ENST00000345662 MPEG1Q2M385 716 aa16.21■□□□□ 0.18
SPAST-202ENST00000345662 PRSS42Q7Z5A4 293 aa16.21■□□□□ 0.18
SPAST-202ENST00000345662 UCN3Q969E3 161 aa16.21■□□□□ 0.18
SPAST-202ENST00000345662 CHST8Q9H2A9 424 aa16.21■□□□□ 0.18
SPAST-202ENST00000345662 TEAD1P28347 426 aa16.2■□□□□ 0.18
SPAST-202ENST00000345662 ALKBH1Q13686 389 aaKnown RBP16.2■□□□□ 0.18
SPAST-202ENST00000345662 ELOCQ15369 112 aa16.2■□□□□ 0.18
SPAST-202ENST00000345662 FBXW12Q6X9E4 464 aa16.2■□□□□ 0.18
SPAST-202ENST00000345662 OR56B1Q8NGI3 324 aa16.2■□□□□ 0.18
SPAST-202ENST00000345662 FAM3DQ96BQ1 224 aa16.2■□□□□ 0.18
SPAST-202ENST00000345662 ZNF385DQ9H6B1 395 aa16.2■□□□□ 0.18
SPAST-202ENST00000345662 TARM1B6A8C7 271 aa16.2■□□□□ 0.18
SPAST-202ENST00000345662 F5H5K5 113 aa16.2■□□□□ 0.18
SPAST-202ENST00000345662 TLE4Q04727 773 aa16.2■□□□□ 0.18
SPAST-202ENST00000345662 RAB33AQ14088 237 aa16.2■□□□□ 0.18
SPAST-202ENST00000345662 FAM71E1Q6IPT2 247 aa16.2■□□□□ 0.18
SPAST-202ENST00000345662 MFSD4AQ8N468 514 aa16.2■□□□□ 0.18
SPAST-202ENST00000345662 OR5L2Q8NGL0 311 aa16.2■□□□□ 0.18
SPAST-202ENST00000345662 F13BP05160 661 aa16.2■□□□□ 0.18
SPAST-202ENST00000345662 PRDX1Q06830 199 aaKnown RBP16.2■□□□□ 0.18
SPAST-202ENST00000345662 MRPL49Q13405 166 aaKnown RBP16.2■□□□□ 0.18
SPAST-202ENST00000345662 GPM6BQ13491 265 aa16.2■□□□□ 0.18
SPAST-202ENST00000345662 Q6ZTK2 550 aa16.2■□□□□ 0.18
SPAST-202ENST00000345662 HIST2H3AQ71DI3 136 aa16.2■□□□□ 0.18
SPAST-202ENST00000345662 ZNF611Q8N823 705 aa16.2■□□□□ 0.18
SPAST-202ENST00000345662 OR52E1Q8NGJ3 308 aa16.2■□□□□ 0.18
SPAST-202ENST00000345662 TSACCQ96A04 125 aaPredicted RBP16.2■□□□□ 0.18
SPAST-202ENST00000345662 NDRG3Q9UGV2 375 aa16.2■□□□□ 0.18
SPAST-202ENST00000345662 GON4LQ3T8J9 2241 aa16.2■□□□□ 0.18
SPAST-202ENST00000345662 LOC100289279A0A1B0GTE1 492 aa16.2■□□□□ 0.18
SPAST-202ENST00000345662 MSTNO14793 375 aa16.2■□□□□ 0.18
SPAST-202ENST00000345662 TIMP2P16035 220 aa16.2■□□□□ 0.18
SPAST-202ENST00000345662 ARRB1P49407 418 aaPredicted RBP16.2■□□□□ 0.18
SPAST-202ENST00000345662 MARCH8Q5T0T0 291 aa16.2■□□□□ 0.18
SPAST-202ENST00000345662 GPR137CQ8N3F9 429 aa16.2■□□□□ 0.18
SPAST-202ENST00000345662 KCNRGQ8N5I3 272 aa16.2■□□□□ 0.18
SPAST-202ENST00000345662 FOXN4Q96NZ1 517 aa16.2■□□□□ 0.18
SPAST-202ENST00000345662 NMNAT3Q96T66 252 aa16.2■□□□□ 0.18
SPAST-202ENST00000345662 SLC17A9Q9BYT1 436 aa16.2■□□□□ 0.18
SPAST-202ENST00000345662 SLC22A11Q9NSA0 550 aa16.2■□□□□ 0.18
SPAST-202ENST00000345662 F3P13726 295 aa16.19■□□□□ 0.18
SPAST-202ENST00000345662 MAOBP27338 520 aa16.19■□□□□ 0.18
SPAST-202ENST00000345662 FABP5Q01469 135 aa16.19■□□□□ 0.18
SPAST-202ENST00000345662 NSDHLQ15738 373 aa16.19■□□□□ 0.18
SPAST-202ENST00000345662 EXOSC6Q5RKV6 272 aaKnown RBP16.19■□□□□ 0.18
SPAST-202ENST00000345662 C1QTNF12Q5T7M4 302 aa16.19■□□□□ 0.18
SPAST-202ENST00000345662 GLCCI1Q86VQ1 547 aa16.19■□□□□ 0.18
SPAST-202ENST00000345662 KLHDC8BQ8IXV7 354 aa16.19■□□□□ 0.18
SPAST-202ENST00000345662 RAB3CQ96E17 227 aa16.19■□□□□ 0.18
SPAST-202ENST00000345662 FAM221BA6H8Z2 402 aa16.19■□□□□ 0.18
SPAST-202ENST00000345662 C5AR1P21730 350 aa16.19■□□□□ 0.18
SPAST-202ENST00000345662 TAGLN2P37802 199 aaKnown RBP16.19■□□□□ 0.18
SPAST-202ENST00000345662 PFN3P60673 137 aa16.19■□□□□ 0.18
SPAST-202ENST00000345662 HNRNPKP61978 463 aaKnown RBP eCLIP16.19■□□□□ 0.18
SPAST-202ENST00000345662 RAET1LQ5VY80 246 aa16.19■□□□□ 0.18
SPAST-202ENST00000345662 TMEM151BQ8IW70 566 aa16.19■□□□□ 0.18
SPAST-202ENST00000345662 CPXM2Q8N436 756 aa16.19■□□□□ 0.18
SPAST-202ENST00000345662 OR2A14Q96R47 310 aa16.19■□□□□ 0.18
SPAST-202ENST00000345662 CHST2Q9Y4C5 530 aa16.19■□□□□ 0.18
SPAST-202ENST00000345662 LCATP04180 440 aa16.19■□□□□ 0.18
SPAST-202ENST00000345662 ZNF28P17035 718 aa16.19■□□□□ 0.18
SPAST-202ENST00000345662 SERPINA2P20848 420 aa16.19■□□□□ 0.18
SPAST-202ENST00000345662 EPHA2P29317 976 aa16.19■□□□□ 0.18
SPAST-202ENST00000345662 RAD52P43351 418 aa16.19■□□□□ 0.18
SPAST-202ENST00000345662 RAB31Q13636 194 aa16.19■□□□□ 0.18
SPAST-202ENST00000345662 RBM45Q8IUH3 476 aaKnown RBP16.19■□□□□ 0.18
SPAST-202ENST00000345662 RCBTB1Q8NDN9 531 aa16.19■□□□□ 0.18
SPAST-202ENST00000345662 RBMXL1Q96E39 390 aaKnown RBP16.19■□□□□ 0.18
SPAST-202ENST00000345662 OR11A1Q9GZK7 315 aa16.19■□□□□ 0.18
SPAST-202ENST00000345662 TRIM77I1YAP6 450 aa16.19■□□□□ 0.18
SPAST-202ENST00000345662 TMEM189-UBE2V1I3L0A0 370 aa16.19■□□□□ 0.18
SPAST-202ENST00000345662 CALCBP10092 127 aa16.19■□□□□ 0.18
SPAST-202ENST00000345662 ACVR1Q04771 509 aa16.19■□□□□ 0.18
SPAST-202ENST00000345662 CD300CQ08708 224 aa16.19■□□□□ 0.18
SPAST-202ENST00000345662 KIR2DS3Q14952 304 aa16.19■□□□□ 0.18
SPAST-202ENST00000345662 DEFB110Q30KQ9 67 aa16.19■□□□□ 0.18
SPAST-202ENST00000345662 ACSM5Q6NUN0 579 aa16.19■□□□□ 0.18
SPAST-202ENST00000345662 TM4SF18Q96CE8 201 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms