RNA–Protein interactions for RNA: ENST00000345005.8

CLK3-201, Transcript of CDC like kinase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLK3, Length 1,846 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-201ENST00000345005 PRSS33Q8NF86 280 aa11.71□□□□□ -0.54
CLK3-201ENST00000345005 PHOSPHO1Q8TCT1 267 aa11.71□□□□□ -0.54
CLK3-201ENST00000345005 GRHL3Q8TE85 626 aa11.71□□□□□ -0.54
CLK3-201ENST00000345005 TM9SF4Q92544 642 aa11.71□□□□□ -0.54
CLK3-201ENST00000345005 FGF11Q92914 225 aa11.71□□□□□ -0.54
CLK3-201ENST00000345005 SNAPC3Q92966 411 aa11.71□□□□□ -0.54
CLK3-201ENST00000345005 SPSB2Q99619 263 aa11.71□□□□□ -0.54
CLK3-201ENST00000345005 LPAR4Q99677 370 aa11.71□□□□□ -0.54
CLK3-201ENST00000345005 CMKLR1Q99788 373 aa11.71□□□□□ -0.54
CLK3-201ENST00000345005 NRSN2Q9GZP1 204 aa11.71□□□□□ -0.54
CLK3-201ENST00000345005 EGLN3Q9H6Z9 239 aa11.71□□□□□ -0.54
CLK3-201ENST00000345005 EXOSC3Q9NQT5 275 aaKnown RBP11.71□□□□□ -0.54
CLK3-201ENST00000345005 SLC39A1Q9NY26 324 aa11.71□□□□□ -0.54
CLK3-201ENST00000345005 COMMD3Q9UBI1 195 aa11.71□□□□□ -0.54
CLK3-201ENST00000345005 IGHV3-20A0A0C4DH32 117 aa11.7□□□□□ -0.54
CLK3-201ENST00000345005 UNC119BA6NIH7 251 aa11.7□□□□□ -0.54
CLK3-201ENST00000345005 CDX4O14627 284 aaPredicted RBP11.7□□□□□ -0.54
CLK3-201ENST00000345005 ZNF264O43296 627 aa11.7□□□□□ -0.54
CLK3-201ENST00000345005 ADAM11O75078 769 aa11.7□□□□□ -0.54
CLK3-201ENST00000345005 FAM157BP0CG42 384 aa11.7□□□□□ -0.54
CLK3-201ENST00000345005 CD59P13987 128 aa11.7□□□□□ -0.54
CLK3-201ENST00000345005 ARSBP15848 533 aa11.7□□□□□ -0.54
CLK3-201ENST00000345005 HK1P19367 917 aa11.7□□□□□ -0.54
CLK3-201ENST00000345005 CTBP2P56545 445 aa11.7□□□□□ -0.54
CLK3-201ENST00000345005 NRG3P56975 720 aa11.7□□□□□ -0.54
CLK3-201ENST00000345005 FOXL2P58012 376 aa11.7□□□□□ -0.54
CLK3-201ENST00000345005 E2F1Q01094 437 aa11.7□□□□□ -0.54
CLK3-201ENST00000345005 PAPD4Q6PIY7 484 aaKnown RBP11.7□□□□□ -0.54
CLK3-201ENST00000345005 LINC00114Q6XXX2 140 aa11.7□□□□□ -0.54
CLK3-201ENST00000345005 ZNF620Q6ZNG0 422 aa11.7□□□□□ -0.54
CLK3-201ENST00000345005 PRR22Q8IZ63 422 aa11.7□□□□□ -0.54
CLK3-201ENST00000345005 LRRC17Q8N6Y2 441 aa11.7□□□□□ -0.54
CLK3-201ENST00000345005 GALNT11Q8NCW6 608 aa11.7□□□□□ -0.54
CLK3-201ENST00000345005 BPIFA2Q96DR5 249 aa11.7□□□□□ -0.54
CLK3-201ENST00000345005 OMA1Q96E52 524 aa11.7□□□□□ -0.54
CLK3-201ENST00000345005 ATF6BQ99941 703 aa11.7□□□□□ -0.54
CLK3-201ENST00000345005 ZNF426Q9BUY5 554 aa11.7□□□□□ -0.54
CLK3-201ENST00000345005 PLA2G12AQ9BZM1 189 aa11.7□□□□□ -0.54
CLK3-201ENST00000345005 STRADBQ9C0K7 418 aa11.7□□□□□ -0.54
CLK3-201ENST00000345005 COPZ2Q9P299 210 aa11.7□□□□□ -0.54
CLK3-201ENST00000345005 RABL2AQ9UBK7 228 aaPredicted RBP11.7□□□□□ -0.54
CLK3-201ENST00000345005 TEKT2Q9UIF3 430 aa11.7□□□□□ -0.54
CLK3-201ENST00000345005 FBXO9Q9UK97 447 aaPredicted RBP11.7□□□□□ -0.54
CLK3-201ENST00000345005 CDH10Q9Y6N8 788 aa11.7□□□□□ -0.54
CLK3-201ENST00000345005 FRYLO94915 3013 aa11.7□□□□□ -0.54
CLK3-201ENST00000345005 A0A1W2PQD3 144 aa11.7□□□□□ -0.54
CLK3-201ENST00000345005 CDC14CA4D256 554 aa11.7□□□□□ -0.54
CLK3-201ENST00000345005 ICOSLGO75144 302 aa11.7□□□□□ -0.54
CLK3-201ENST00000345005 RFPL3O75679 317 aa11.7□□□□□ -0.54
CLK3-201ENST00000345005 RCBTB2O95199 551 aa11.7□□□□□ -0.54
CLK3-201ENST00000345005 HMGN1P05114 100 aa11.7□□□□□ -0.54
CLK3-201ENST00000345005 CLEC2LP0C7M8 214 aa11.7□□□□□ -0.54
CLK3-201ENST00000345005 ZNF28P17035 718 aa11.7□□□□□ -0.54
CLK3-201ENST00000345005 APEX1P27695 318 aaKnown RBP11.7□□□□□ -0.54
CLK3-201ENST00000345005 ABCD3P28288 659 aa11.7□□□□□ -0.54
CLK3-201ENST00000345005 GAS1P54826 345 aa11.7□□□□□ -0.54
CLK3-201ENST00000345005 RPS25P62851 125 aaKnown RBP11.7□□□□□ -0.54
CLK3-201ENST00000345005 BTBD16Q32M84 506 aa11.7□□□□□ -0.54
CLK3-201ENST00000345005 Q5BKY6 102 aa11.7□□□□□ -0.54
CLK3-201ENST00000345005 RPL13AP3Q6NVV1 102 aa11.7□□□□□ -0.54
CLK3-201ENST00000345005 KIRREL2Q6UWL6 708 aa11.7□□□□□ -0.54
CLK3-201ENST00000345005 NAXDQ8IW45 347 aa11.7□□□□□ -0.54
CLK3-201ENST00000345005 APCDD1LQ8NCL9 501 aa11.7□□□□□ -0.54
CLK3-201ENST00000345005 NUBPLQ8TB37 319 aa11.7□□□□□ -0.54
CLK3-201ENST00000345005 MR1Q95460 341 aa11.7□□□□□ -0.54
CLK3-201ENST00000345005 TMEM203Q969S6 136 aa11.7□□□□□ -0.54
CLK3-201ENST00000345005 CCNL2Q96S94 520 aaPredicted RBP11.7□□□□□ -0.54
CLK3-201ENST00000345005 DPH1Q9BZG8 443 aa11.7□□□□□ -0.54
CLK3-201ENST00000345005 ULBP3Q9BZM4 244 aa11.7□□□□□ -0.54
CLK3-201ENST00000345005 LAT2Q9GZY6 243 aa11.7□□□□□ -0.54
CLK3-201ENST00000345005 EMC7Q9NPA0 242 aa11.7□□□□□ -0.54
CLK3-201ENST00000345005 ZNF275Q9NSD4 429 aaPredicted RBP11.7□□□□□ -0.54
CLK3-201ENST00000345005 EXOGQ9Y2C4 368 aaKnown RBP11.7□□□□□ -0.54
CLK3-201ENST00000345005 A0A0B4J293 547 aa11.69□□□□□ -0.54
CLK3-201ENST00000345005 C9J4A7 227 aa11.69□□□□□ -0.54
CLK3-201ENST00000345005 CDC42EP2O14613 210 aa11.69□□□□□ -0.54
CLK3-201ENST00000345005 GDF9O60383 454 aa11.69□□□□□ -0.54
CLK3-201ENST00000345005 TSPAN9O75954 239 aa11.69□□□□□ -0.54
CLK3-201ENST00000345005 MAKP20794 623 aa11.69□□□□□ -0.54
CLK3-201ENST00000345005 SLC6A8P48029 635 aa11.69□□□□□ -0.54
CLK3-201ENST00000345005 MTNR1BP49286 362 aa11.69□□□□□ -0.54
CLK3-201ENST00000345005 FABP5Q01469 135 aa11.69□□□□□ -0.54
CLK3-201ENST00000345005 TCF15Q12870 199 aa11.69□□□□□ -0.54
CLK3-201ENST00000345005 BAMBIQ13145 260 aa11.69□□□□□ -0.54
CLK3-201ENST00000345005 SKP2Q13309 424 aa11.69□□□□□ -0.54
CLK3-201ENST00000345005 DOC2BQ14184 412 aa11.69□□□□□ -0.54
CLK3-201ENST00000345005 CD226Q15762 336 aa11.69□□□□□ -0.54
CLK3-201ENST00000345005 NDUFAF6Q330K2 333 aa11.69□□□□□ -0.54
CLK3-201ENST00000345005 WBP2NLQ6ICG8 309 aa11.69□□□□□ -0.54
CLK3-201ENST00000345005 APOOLQ6UXV4 268 aa11.69□□□□□ -0.54
CLK3-201ENST00000345005 LRRC28Q86X40 367 aaPredicted RBP11.69□□□□□ -0.54
CLK3-201ENST00000345005 SLC38A6Q8IZM9 456 aa11.69□□□□□ -0.54
CLK3-201ENST00000345005 GATSQ8NAP1 163 aa11.69□□□□□ -0.54
CLK3-201ENST00000345005 SLC37A3Q8NCC5 494 aa11.69□□□□□ -0.54
CLK3-201ENST00000345005 OR5L2Q8NGL0 311 aa11.69□□□□□ -0.54
CLK3-201ENST00000345005 OR8D4Q8NGM9 314 aa11.69□□□□□ -0.54
CLK3-201ENST00000345005 OR8K3Q8NH51 312 aa11.69□□□□□ -0.54
CLK3-201ENST00000345005 PFN4Q8NHR9 129 aa11.69□□□□□ -0.54
CLK3-201ENST00000345005 BRIX1Q8TDN6 353 aaKnown RBP11.69□□□□□ -0.54
CLK3-201ENST00000345005 GATAD2BQ8WXI9 593 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms