RNA–Protein interactions for RNA: ENST00000344113.8

SYNE2-202, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNE2, Length 21,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-202ENST00000344113 Q6ZN92 141 aa3.51□□□□□ -1.85
SYNE2-202ENST00000344113 OXER1Q8TDS5 423 aa3.51□□□□□ -1.85
SYNE2-202ENST00000344113 NSUN5Q96P11 429 aaKnown RBP3.51□□□□□ -1.85
SYNE2-202ENST00000344113 GPA33Q99795 319 aa3.51□□□□□ -1.85
SYNE2-202ENST00000344113 PLEKHA3Q9HB20 300 aa3.51□□□□□ -1.85
SYNE2-202ENST00000344113 TRDV1A0A1B0GX56 115 aa3.51□□□□□ -1.85
SYNE2-202ENST00000344113 C7orf72A4D263 438 aa3.51□□□□□ -1.85
SYNE2-202ENST00000344113 MBTPS2O43462 519 aa3.51□□□□□ -1.85
SYNE2-202ENST00000344113 STBD1O95210 358 aa3.51□□□□□ -1.85
SYNE2-202ENST00000344113 MTNR1AP48039 350 aa3.51□□□□□ -1.85
SYNE2-202ENST00000344113 ELOBQ15370 118 aa3.51□□□□□ -1.85
SYNE2-202ENST00000344113 FBXO31Q5XUX0 539 aaPredicted RBP3.51□□□□□ -1.85
SYNE2-202ENST00000344113 CYB5RLQ6IPT4 315 aa3.51□□□□□ -1.85
SYNE2-202ENST00000344113 OR2V1Q8NHB1 315 aa3.51□□□□□ -1.85
SYNE2-202ENST00000344113 TMEM43Q9BTV4 400 aa3.51□□□□□ -1.85
SYNE2-202ENST00000344113 ZNF638Q14966 1978 aaKnown RBP3.51□□□□□ -1.85
SYNE2-202ENST00000344113 MSTNO14793 375 aa3.51□□□□□ -1.85
SYNE2-202ENST00000344113 SIAH2O43255 324 aa3.51□□□□□ -1.85
SYNE2-202ENST00000344113 PRKAB2O43741 272 aa3.51□□□□□ -1.85
SYNE2-202ENST00000344113 RENP00797 406 aa3.51□□□□□ -1.85
SYNE2-202ENST00000344113 DPP4P27487 766 aa3.51□□□□□ -1.85
SYNE2-202ENST00000344113 WNT5AP41221 380 aa3.51□□□□□ -1.85
SYNE2-202ENST00000344113 SNRPD2P62316 118 aaKnown RBP3.51□□□□□ -1.85
SYNE2-202ENST00000344113 ARFRP1Q13795 201 aa3.51□□□□□ -1.85
SYNE2-202ENST00000344113 UNQ6126/PRO20091Q6UXV3 157 aa3.51□□□□□ -1.85
SYNE2-202ENST00000344113 OR10P1Q8NGE3 313 aa3.51□□□□□ -1.85
SYNE2-202ENST00000344113 ATG4CQ96DT6 458 aa3.51□□□□□ -1.85
SYNE2-202ENST00000344113 LCORQ96JN0 433 aaPredicted RBP3.51□□□□□ -1.85
SYNE2-202ENST00000344113 TREX1Q9NSU2 369 aa3.51□□□□□ -1.85
SYNE2-202ENST00000344113 CUTCQ9NTM9 273 aa3.51□□□□□ -1.85
SYNE2-202ENST00000344113 PIM2Q9P1W9 311 aa3.51□□□□□ -1.85
SYNE2-202ENST00000344113 ASF1AQ9Y294 204 aa3.51□□□□□ -1.85
SYNE2-202ENST00000344113 A0A0U1RQK1 487 aa3.51□□□□□ -1.85
SYNE2-202ENST00000344113 ZNF320A2RRD8 509 aa3.51□□□□□ -1.85
SYNE2-202ENST00000344113 K7EQM0 130 aa3.51□□□□□ -1.85
SYNE2-202ENST00000344113 ZNF44P15621 663 aa3.51□□□□□ -1.85
SYNE2-202ENST00000344113 ADORA2AP29274 412 aa3.51□□□□□ -1.85
SYNE2-202ENST00000344113 LSM11P83369 360 aaKnown RBP eCLIP3.51□□□□□ -1.85
SYNE2-202ENST00000344113 PCBP1Q15365 356 aaKnown RBP eCLIP3.51□□□□□ -1.85
SYNE2-202ENST00000344113 TMEM244Q5VVB8 128 aa3.51□□□□□ -1.85
SYNE2-202ENST00000344113 LIPKQ5VXJ0 399 aa3.51□□□□□ -1.85
SYNE2-202ENST00000344113 GOLGA7Q7Z5G4 137 aa3.51□□□□□ -1.85
SYNE2-202ENST00000344113 TRIM48Q8IWZ4 208 aa3.51□□□□□ -1.85
SYNE2-202ENST00000344113 SLC35F2Q8IXU6 374 aa3.51□□□□□ -1.85
SYNE2-202ENST00000344113 OR6K2Q8NGY2 324 aa3.51□□□□□ -1.85
SYNE2-202ENST00000344113 LKAAEAR1Q8TD35 194 aa3.51□□□□□ -1.85
SYNE2-202ENST00000344113 SH3RF2Q8TEC5 729 aa3.51□□□□□ -1.85
SYNE2-202ENST00000344113 SLAMF9Q96A28 289 aa3.51□□□□□ -1.85
SYNE2-202ENST00000344113 KTI12Q96EK9 354 aaPredicted RBP3.51□□□□□ -1.85
SYNE2-202ENST00000344113 ZNF430Q9H8G1 570 aaPredicted RBP3.51□□□□□ -1.85
SYNE2-202ENST00000344113 CEP152O94986 1710 aa3.51□□□□□ -1.85
SYNE2-202ENST00000344113 DUXAA6NLW8 204 aa3.51□□□□□ -1.85
SYNE2-202ENST00000344113 GNRH1P01148 92 aa3.51□□□□□ -1.85
SYNE2-202ENST00000344113 ENGP17813 658 aa3.51□□□□□ -1.85
SYNE2-202ENST00000344113 CELP19835 753 aa3.51□□□□□ -1.85
SYNE2-202ENST00000344113 POLR2HP52434 150 aaKnown RBP3.51□□□□□ -1.85
SYNE2-202ENST00000344113 ACKR1Q16570 336 aa3.51□□□□□ -1.85
SYNE2-202ENST00000344113 HENMT1Q5T8I9 393 aaKnown RBP3.51□□□□□ -1.85
SYNE2-202ENST00000344113 OR2T2Q6IF00 324 aa3.51□□□□□ -1.85
SYNE2-202ENST00000344113 CNIH2Q6PI25 160 aa3.51□□□□□ -1.85
SYNE2-202ENST00000344113 GLT6D1Q7Z4J2 308 aa3.51□□□□□ -1.85
SYNE2-202ENST00000344113 POGLUT1Q8NBL1 392 aa3.51□□□□□ -1.85
SYNE2-202ENST00000344113 RERGQ96A58 199 aaPredicted RBP3.51□□□□□ -1.85
SYNE2-202ENST00000344113 COPS8Q99627 209 aa3.51□□□□□ -1.85
SYNE2-202ENST00000344113 CRLS1Q9UJA2 301 aa3.51□□□□□ -1.85
SYNE2-202ENST00000344113 SOX1O00570 391 aaPredicted RBP3.51□□□□□ -1.85
SYNE2-202ENST00000344113 PSMB6P28072 239 aa3.51□□□□□ -1.85
SYNE2-202ENST00000344113 PYCR3Q53H96 274 aa3.51□□□□□ -1.85
SYNE2-202ENST00000344113 BEND7Q8N7W2 519 aaPredicted RBP3.51□□□□□ -1.85
SYNE2-202ENST00000344113 OR2AE1Q8NHA4 323 aa3.51□□□□□ -1.85
SYNE2-202ENST00000344113 HPDLQ96IR7 371 aa3.51□□□□□ -1.85
SYNE2-202ENST00000344113 PDCD2LQ9BRP1 358 aa3.51□□□□□ -1.85
SYNE2-202ENST00000344113 WDCPQ9H6R7 721 aa3.51□□□□□ -1.85
SYNE2-202ENST00000344113 LIPGQ9Y5X9 500 aa3.51□□□□□ -1.85
SYNE2-202ENST00000344113 TMEM269A0A1B0GVZ9 245 aa3.51□□□□□ -1.85
SYNE2-202ENST00000344113 BMP3P12645 472 aa3.51□□□□□ -1.85
SYNE2-202ENST00000344113 ADRA2CP18825 462 aa3.51□□□□□ -1.85
SYNE2-202ENST00000344113 TAS2R38P59533 333 aa3.51□□□□□ -1.85
SYNE2-202ENST00000344113 TSEN54Q7Z6J9 526 aaKnown RBP3.51□□□□□ -1.85
SYNE2-202ENST00000344113 MAP4K3Q8IVH8 894 aa3.51□□□□□ -1.85
SYNE2-202ENST00000344113 OR51Q1Q8NH59 317 aa3.51□□□□□ -1.85
SYNE2-202ENST00000344113 TRMT61BQ9BVS5 477 aaKnown RBP3.51□□□□□ -1.85
SYNE2-202ENST00000344113 CLCA3PQ9Y6N3 262 aa3.51□□□□□ -1.85
SYNE2-202ENST00000344113 PBRM1Q86U86 1689 aa3.51□□□□□ -1.85
SYNE2-202ENST00000344113 MYH6P13533 1939 aa3.51□□□□□ -1.85
SYNE2-202ENST00000344113 ZNF814B7Z6K7 855 aa3.51□□□□□ -1.85
SYNE2-202ENST00000344113 HOXB5P09067 269 aa3.51□□□□□ -1.85
SYNE2-202ENST00000344113 HOXA5P20719 270 aa3.51□□□□□ -1.85
SYNE2-202ENST00000344113 POLR2LP62875 67 aaKnown RBP3.51□□□□□ -1.85
SYNE2-202ENST00000344113 HSD11B2P80365 405 aa3.51□□□□□ -1.85
SYNE2-202ENST00000344113 TROAPQ12815 778 aa3.51□□□□□ -1.85
SYNE2-202ENST00000344113 CENPVQ7Z7K6 275 aaPredicted RBP3.51□□□□□ -1.85
SYNE2-202ENST00000344113 PARK7Q99497 189 aaKnown RBP3.51□□□□□ -1.85
SYNE2-202ENST00000344113 EGFL7Q9UHF1 273 aa3.51□□□□□ -1.85
SYNE2-202ENST00000344113 OR5H15A6NDH6 313 aa3.51□□□□□ -1.85
SYNE2-202ENST00000344113 OR5H1A6NKK0 313 aa3.51□□□□□ -1.85
SYNE2-202ENST00000344113 MANBAO00462 879 aa3.51□□□□□ -1.85
SYNE2-202ENST00000344113 LMX1BO60663 402 aa3.51□□□□□ -1.85
SYNE2-202ENST00000344113 MMP3P08254 477 aa3.51□□□□□ -1.85
SYNE2-202ENST00000344113 NME1P15531 152 aaKnown RBP3.51□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms