RNA–Protein interactions for RNA: ENST00000339162.11

PDLIM2-203, Transcript of PDZ and LIM domain 2, humanhuman

TSL 1 (best) BASIC

Gene PDLIM2, Length 2,226 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-203ENST00000339162 ZNF404Q494X3 552 aa20.28■□□□□ 0.84
PDLIM2-203ENST00000339162 TMPRSS11AQ6ZMR5 421 aa20.28■□□□□ 0.84
PDLIM2-203ENST00000339162 MAMDC2Q7Z304 686 aaPredicted RBP20.28■□□□□ 0.84
PDLIM2-203ENST00000339162 PPP1R32Q7Z5V6 425 aa20.28■□□□□ 0.84
PDLIM2-203ENST00000339162 OR5M1Q8NGP8 315 aa20.28■□□□□ 0.84
PDLIM2-203ENST00000339162 OR6Q1Q8NGQ2 317 aa20.28■□□□□ 0.84
PDLIM2-203ENST00000339162 M1APQ8TC57 530 aa20.28■□□□□ 0.84
PDLIM2-203ENST00000339162 DCLRE1CQ96SD1 692 aaKnown RBP20.28■□□□□ 0.84
PDLIM2-203ENST00000339162 TXNL4BQ9NX01 149 aaKnown RBP20.28■□□□□ 0.84
PDLIM2-203ENST00000339162 SIRT4Q9Y6E7 314 aaPredicted RBP20.28■□□□□ 0.84
PDLIM2-203ENST00000339162 ZNF318Q5VUA4 2279 aa20.28■□□□□ 0.84
PDLIM2-203ENST00000339162 METTL15A6NJ78 407 aa20.27■□□□□ 0.84
PDLIM2-203ENST00000339162 AKAP8O43823 692 aaKnown RBP20.27■□□□□ 0.84
PDLIM2-203ENST00000339162 IDUAP35475 653 aa20.27■□□□□ 0.84
PDLIM2-203ENST00000339162 RPS19P39019 145 aaKnown RBP20.27■□□□□ 0.84
PDLIM2-203ENST00000339162 INSL4Q14641 139 aa20.27■□□□□ 0.84
PDLIM2-203ENST00000339162 CRTC2Q53ET0 693 aaPredicted RBP20.27■□□□□ 0.84
PDLIM2-203ENST00000339162 MESTQ5EB52 335 aa20.27■□□□□ 0.84
PDLIM2-203ENST00000339162 ST8SIA1Q92185 356 aa20.27■□□□□ 0.84
PDLIM2-203ENST00000339162 LIN37Q96GY3 246 aaPredicted RBP20.27■□□□□ 0.84
PDLIM2-203ENST00000339162 NMNAT2Q9BZQ4 307 aa20.27■□□□□ 0.84
PDLIM2-203ENST00000339162 ISYNA1Q9NPH2 558 aa20.27■□□□□ 0.84
PDLIM2-203ENST00000339162 H3BML4 177 aa20.27■□□□□ 0.84
PDLIM2-203ENST00000339162 DCTN6O00399 190 aa20.27■□□□□ 0.84
PDLIM2-203ENST00000339162 RNF13O43567 381 aa20.27■□□□□ 0.84
PDLIM2-203ENST00000339162 SELENOFO60613 162 aa20.27■□□□□ 0.84
PDLIM2-203ENST00000339162 OPN1LWP04000 364 aa20.27■□□□□ 0.84
PDLIM2-203ENST00000339162 HTR3AP46098 478 aa20.27■□□□□ 0.84
PDLIM2-203ENST00000339162 FABP5Q01469 135 aa20.27■□□□□ 0.84
PDLIM2-203ENST00000339162 MXD1Q05195 221 aa20.27■□□□□ 0.84
PDLIM2-203ENST00000339162 KDM8Q8N371 416 aa20.27■□□□□ 0.84
PDLIM2-203ENST00000339162 CDC6Q99741 560 aa20.27■□□□□ 0.84
PDLIM2-203ENST00000339162 ZPBPQ9BS86 351 aa20.27■□□□□ 0.84
PDLIM2-203ENST00000339162 TPK1Q9H3S4 243 aa20.27■□□□□ 0.84
PDLIM2-203ENST00000339162 CCDC86Q9H6F5 360 aaKnown RBP20.27■□□□□ 0.84
PDLIM2-203ENST00000339162 SRA1Q9HD15 236 aaKnown RBP20.27■□□□□ 0.84
PDLIM2-203ENST00000339162 CELSR3Q9NYQ7 3312 aa20.27■□□□□ 0.83
PDLIM2-203ENST00000339162 SDK2Q58EX2 2172 aa20.27■□□□□ 0.83
PDLIM2-203ENST00000339162 E9PI62 339 aa20.26■□□□□ 0.83
PDLIM2-203ENST00000339162 J3QLW9 94 aa20.26■□□□□ 0.83
PDLIM2-203ENST00000339162 AHSA1O95433 338 aa20.26■□□□□ 0.83
PDLIM2-203ENST00000339162 ZNF19P17023 458 aa20.26■□□□□ 0.83
PDLIM2-203ENST00000339162 OR12D2P58182 307 aa20.26■□□□□ 0.83
PDLIM2-203ENST00000339162 KRR1Q13601 381 aaKnown RBP20.26■□□□□ 0.83
PDLIM2-203ENST00000339162 HES3Q5TGS1 186 aa20.26■□□□□ 0.83
PDLIM2-203ENST00000339162 CPAMD8Q8IZJ3 1885 aa20.26■□□□□ 0.83
PDLIM2-203ENST00000339162 OR5J2Q8NH18 312 aa20.26■□□□□ 0.83
PDLIM2-203ENST00000339162 ZNF417Q8TAU3 575 aa20.26■□□□□ 0.83
PDLIM2-203ENST00000339162 C4orf36Q96KX1 117 aa20.26■□□□□ 0.83
PDLIM2-203ENST00000339162 ZNF587Q96SQ5 575 aaPredicted RBP20.26■□□□□ 0.83
PDLIM2-203ENST00000339162 CNN2Q99439 309 aaKnown RBP20.26■□□□□ 0.83
PDLIM2-203ENST00000339162 DDA1Q9BW61 102 aa20.26■□□□□ 0.83
PDLIM2-203ENST00000339162 SPRY4Q9C004 299 aa20.26■□□□□ 0.83
PDLIM2-203ENST00000339162 PARD6AQ9NPB6 346 aa20.26■□□□□ 0.83
PDLIM2-203ENST00000339162 BABAM2Q9NXR7 383 aa20.26■□□□□ 0.83
PDLIM2-203ENST00000339162 FARSAQ9Y285 508 aaKnown RBP20.26■□□□□ 0.83
PDLIM2-203ENST00000339162 OTOGLQ3ZCN5 2332 aa20.26■□□□□ 0.83
PDLIM2-203ENST00000339162 MT-ATP6P00846 226 aa20.26■□□□□ 0.83
PDLIM2-203ENST00000339162 TGM4P49221 684 aa20.26■□□□□ 0.83
PDLIM2-203ENST00000339162 DIO1P49895 249 aa20.26■□□□□ 0.83
PDLIM2-203ENST00000339162 ZNF41P51814 821 aaPredicted RBP20.26■□□□□ 0.83
PDLIM2-203ENST00000339162 SUMO3P55854 103 aaPredicted RBP20.26■□□□□ 0.83
PDLIM2-203ENST00000339162 VASNQ6EMK4 673 aa20.26■□□□□ 0.83
PDLIM2-203ENST00000339162 GDPGP1Q6ZNW5 385 aa20.26■□□□□ 0.83
PDLIM2-203ENST00000339162 SYT14Q8NB59 555 aa20.26■□□□□ 0.83
PDLIM2-203ENST00000339162 ASB15Q8WXK1 588 aa20.26■□□□□ 0.83
PDLIM2-203ENST00000339162 HDHD5Q9BXW7 423 aa20.26■□□□□ 0.83
PDLIM2-203ENST00000339162 ZMIZ1Q9ULJ6 1067 aa20.26■□□□□ 0.83
PDLIM2-203ENST00000339162 SLC6A5Q9Y345 797 aa20.26■□□□□ 0.83
PDLIM2-203ENST00000339162 PCNX2A6NKB5 2137 aa20.25■□□□□ 0.83
PDLIM2-203ENST00000339162 EML6Q6ZMW3 1958 aa20.25■□□□□ 0.83
PDLIM2-203ENST00000339162 G3V3Y1 287 aa20.25■□□□□ 0.83
PDLIM2-203ENST00000339162 SLC30A4O14863 429 aa20.25■□□□□ 0.83
PDLIM2-203ENST00000339162 EFNA2O43921 213 aa20.25■□□□□ 0.83
PDLIM2-203ENST00000339162 BMP4P12644 408 aa20.25■□□□□ 0.83
PDLIM2-203ENST00000339162 APEHP13798 732 aaKnown RBP20.25■□□□□ 0.83
PDLIM2-203ENST00000339162 F8A1P23610 371 aa20.25■□□□□ 0.83
PDLIM2-203ENST00000339162 GABRA5P31644 462 aa20.25■□□□□ 0.83
PDLIM2-203ENST00000339162 LGALS3BPQ08380 585 aa20.25■□□□□ 0.83
PDLIM2-203ENST00000339162 SGCBQ16585 318 aa20.25■□□□□ 0.83
PDLIM2-203ENST00000339162 RPTNQ6XPR3 784 aa20.25■□□□□ 0.83
PDLIM2-203ENST00000339162 RPS19BP1Q86WX3 136 aaKnown RBP20.25■□□□□ 0.83
PDLIM2-203ENST00000339162 WDSUB1Q8N9V3 476 aa20.25■□□□□ 0.83
PDLIM2-203ENST00000339162 ZNF511Q8NB15 262 aa20.25■□□□□ 0.83
PDLIM2-203ENST00000339162 TMEM185BQ9H7F4 350 aa20.25■□□□□ 0.83
PDLIM2-203ENST00000339162 AKIP1Q9NQ31 210 aa20.25■□□□□ 0.83
PDLIM2-203ENST00000339162 SDHAF3Q9NRP4 125 aa20.25■□□□□ 0.83
PDLIM2-203ENST00000339162 SNTG1Q9NSN8 517 aa20.25■□□□□ 0.83
PDLIM2-203ENST00000339162 ANKRD10Q9NXR5 420 aa20.25■□□□□ 0.83
PDLIM2-203ENST00000339162 SMIM30A4D0T7 59 aa20.25■□□□□ 0.83
PDLIM2-203ENST00000339162 ZNF670-ZNF695F2Z2N8 137 aa20.25■□□□□ 0.83
PDLIM2-203ENST00000339162 ARHGEF9O43307 516 aa20.25■□□□□ 0.83
PDLIM2-203ENST00000339162 APOBEC1P41238 236 aaKnown RBP20.25■□□□□ 0.83
PDLIM2-203ENST00000339162 Q0VFX4 171 aa20.25■□□□□ 0.83
PDLIM2-203ENST00000339162 POU4F2Q12837 409 aa20.25■□□□□ 0.83
PDLIM2-203ENST00000339162 STK35Q8TDR2 534 aa20.25■□□□□ 0.83
PDLIM2-203ENST00000339162 BORCS5Q969J3 196 aa20.25■□□□□ 0.83
PDLIM2-203ENST00000339162 KCNS3Q9BQ31 491 aa20.25■□□□□ 0.83
PDLIM2-203ENST00000339162 ALG12Q9BV10 488 aa20.25■□□□□ 0.83
PDLIM2-203ENST00000339162 CLDN25C9JDP6 229 aa20.24■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms