RNA–Protein interactions for RNA: ENST00000339037.3

LINC01116-202, Transcript of long intergenic non-protein coding RNA 1116, humanhuman

TSL 3 BASIC

Gene LINC01116, Length 838 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01116-202ENST00000339037 ARPC4-TTLL3A0A0A6YYG9 625 aa13.57□□□□□ -0.24
LINC01116-202ENST00000339037 A0A1W2PPZ6 126 aa13.57□□□□□ -0.24
LINC01116-202ENST00000339037 TRPC5OSA6NMA1 111 aa13.57□□□□□ -0.24
LINC01116-202ENST00000339037 A8MVM7 634 aa13.57□□□□□ -0.24
LINC01116-202ENST00000339037 NR5A2O00482 541 aa13.57□□□□□ -0.24
LINC01116-202ENST00000339037 FRS3O43559 492 aa13.57□□□□□ -0.24
LINC01116-202ENST00000339037 ERCC1P07992 297 aaPredicted RBP13.57□□□□□ -0.24
LINC01116-202ENST00000339037 GKN3PP0CG01 181 aa13.57□□□□□ -0.24
LINC01116-202ENST00000339037 IDH3GP51553 393 aaPredicted RBP13.57□□□□□ -0.24
LINC01116-202ENST00000339037 P2RY4P51582 365 aa13.57□□□□□ -0.24
LINC01116-202ENST00000339037 SH3BGRP55822 239 aaPredicted RBP13.57□□□□□ -0.24
LINC01116-202ENST00000339037 TUBA1BP68363 451 aa13.57□□□□□ -0.24
LINC01116-202ENST00000339037 TUBA4AP68366 448 aa13.57□□□□□ -0.24
LINC01116-202ENST00000339037 BNIP2Q12982 314 aa13.57□□□□□ -0.24
LINC01116-202ENST00000339037 C3orf36Q3SXR2 165 aa13.57□□□□□ -0.24
LINC01116-202ENST00000339037 SLC9B1Q4ZJI4 515 aa13.57□□□□□ -0.24
LINC01116-202ENST00000339037 LIN52Q52LA3 116 aa13.57□□□□□ -0.24
LINC01116-202ENST00000339037 PRAMEF8Q5VWM4 474 aa13.57□□□□□ -0.24
LINC01116-202ENST00000339037 PRAMEF7Q5VXH5 474 aa13.57□□□□□ -0.24
LINC01116-202ENST00000339037 WBP2NLQ6ICG8 309 aa13.57□□□□□ -0.24
LINC01116-202ENST00000339037 NIPAL3Q6P499 406 aa13.57□□□□□ -0.24
LINC01116-202ENST00000339037 ZNF621Q6ZSS3 439 aa13.57□□□□□ -0.24
LINC01116-202ENST00000339037 TUBA1AQ71U36 451 aa13.57□□□□□ -0.24
LINC01116-202ENST00000339037 OR4F15Q8NGB8 312 aa13.57□□□□□ -0.24
LINC01116-202ENST00000339037 TLCD1Q96CP7 247 aa13.57□□□□□ -0.24
LINC01116-202ENST00000339037 MAELQ96JY0 434 aaKnown RBP13.57□□□□□ -0.24
LINC01116-202ENST00000339037 SOX7Q9BT81 388 aa13.57□□□□□ -0.24
LINC01116-202ENST00000339037 CRNNQ9UBG3 495 aaPredicted RBP13.57□□□□□ -0.24
LINC01116-202ENST00000339037 PRDM4Q9UKN5 801 aa13.57□□□□□ -0.24
LINC01116-202ENST00000339037 LRP5LA4QPB2 252 aa13.56□□□□□ -0.24
LINC01116-202ENST00000339037 UPK3AO75631 287 aa13.56□□□□□ -0.24
LINC01116-202ENST00000339037 IGLV1-44P01699 117 aa13.56□□□□□ -0.24
LINC01116-202ENST00000339037 ACAA2P42765 397 aaKnown RBP13.56□□□□□ -0.24
LINC01116-202ENST00000339037 SLC18A1P54219 525 aa13.56□□□□□ -0.24
LINC01116-202ENST00000339037 PRR20EP86478 221 aa13.56□□□□□ -0.24
LINC01116-202ENST00000339037 PRR20CP86479 221 aa13.56□□□□□ -0.24
LINC01116-202ENST00000339037 PRR20DP86480 221 aa13.56□□□□□ -0.24
LINC01116-202ENST00000339037 PRR20BP86481 221 aa13.56□□□□□ -0.24
LINC01116-202ENST00000339037 PRR20AP86496 221 aa13.56□□□□□ -0.24
LINC01116-202ENST00000339037 LRRC74AQ0VAA2 488 aa13.56□□□□□ -0.24
LINC01116-202ENST00000339037 MAPK11Q15759 364 aa13.56□□□□□ -0.24
LINC01116-202ENST00000339037 PDCD4Q53EL6 469 aaKnown RBP13.56□□□□□ -0.24
LINC01116-202ENST00000339037 C1orf140Q5VVS0 124 aa13.56□□□□□ -0.24
LINC01116-202ENST00000339037 ATG16L1Q676U5 607 aa13.56□□□□□ -0.24
LINC01116-202ENST00000339037 NXNQ6DKJ4 435 aa13.56□□□□□ -0.24
LINC01116-202ENST00000339037 ZNF836Q6ZNA1 936 aa13.56□□□□□ -0.24
LINC01116-202ENST00000339037 LINGO2Q7L985 606 aa13.56□□□□□ -0.24
LINC01116-202ENST00000339037 EPHX4Q8IUS5 362 aa13.56□□□□□ -0.24
LINC01116-202ENST00000339037 FAM169BQ8N8A8 192 aa13.56□□□□□ -0.24
LINC01116-202ENST00000339037 NUP37Q8NFH4 326 aa13.56□□□□□ -0.24
LINC01116-202ENST00000339037 OR52P1PQ8NH57 321 aa13.56□□□□□ -0.24
LINC01116-202ENST00000339037 MAGEE2Q8TD90 523 aaPredicted RBP13.56□□□□□ -0.24
LINC01116-202ENST00000339037 ZBTB18Q99592 522 aa13.56□□□□□ -0.24
LINC01116-202ENST00000339037 TMBIM4Q9HC24 238 aa13.56□□□□□ -0.24
LINC01116-202ENST00000339037 P2RX2Q9UBL9 471 aa13.56□□□□□ -0.24
LINC01116-202ENST00000339037 RASD1Q9Y272 281 aa13.56□□□□□ -0.24
LINC01116-202ENST00000339037 A0A096LPI6 279 aa13.55□□□□□ -0.24
LINC01116-202ENST00000339037 STAMBPO95630 424 aa13.55□□□□□ -0.24
LINC01116-202ENST00000339037 KRT75O95678 551 aa13.55□□□□□ -0.24
LINC01116-202ENST00000339037 IGKV3-15P01624 115 aa13.55□□□□□ -0.24
LINC01116-202ENST00000339037 TFPTP0C1Z6 253 aa13.55□□□□□ -0.24
LINC01116-202ENST00000339037 IDO1P14902 403 aa13.55□□□□□ -0.24
LINC01116-202ENST00000339037 DAOP14920 347 aa13.55□□□□□ -0.24
LINC01116-202ENST00000339037 NCF2P19878 526 aaPredicted RBP13.55□□□□□ -0.24
LINC01116-202ENST00000339037 GIFP27352 417 aa13.55□□□□□ -0.24
LINC01116-202ENST00000339037 CALCRP30988 508 aa13.55□□□□□ -0.24
LINC01116-202ENST00000339037 CHN2P52757 468 aa13.55□□□□□ -0.24
LINC01116-202ENST00000339037 MVDP53602 400 aa13.55□□□□□ -0.24
LINC01116-202ENST00000339037 ROR2Q01974 943 aaKnown RBP13.55□□□□□ -0.24
LINC01116-202ENST00000339037 VRK2Q86Y07 508 aa13.55□□□□□ -0.24
LINC01116-202ENST00000339037 RFLNBQ8N5W9 214 aa13.55□□□□□ -0.24
LINC01116-202ENST00000339037 GLB1L3Q8NCI6 653 aaPredicted RBP13.55□□□□□ -0.24
LINC01116-202ENST00000339037 OR9I1Q8NGQ6 314 aa13.55□□□□□ -0.24
LINC01116-202ENST00000339037 OR52B2Q96RD2 323 aa13.55□□□□□ -0.24
LINC01116-202ENST00000339037 LINC00470Q9BZP3 86 aa13.55□□□□□ -0.24
LINC01116-202ENST00000339037 NELFAQ9H3P2 528 aa13.55□□□□□ -0.24
LINC01116-202ENST00000339037 ZNF442Q9H7R0 627 aa13.55□□□□□ -0.24
LINC01116-202ENST00000339037 SEC61A2Q9H9S3 476 aa13.55□□□□□ -0.24
LINC01116-202ENST00000339037 NKIRAS1Q9NYS0 192 aa13.55□□□□□ -0.24
LINC01116-202ENST00000339037 DSPPQ9NZW4 1301 aa13.55□□□□□ -0.24
LINC01116-202ENST00000339037 VSTM5A8MXK1 200 aa13.54□□□□□ -0.24
LINC01116-202ENST00000339037 SLCO1B7G3V0H7 640 aa13.54□□□□□ -0.24
LINC01116-202ENST00000339037 hCG_2039718K7EN88 272 aa13.54□□□□□ -0.24
LINC01116-202ENST00000339037 RFXANKO14593 260 aa13.54□□□□□ -0.24
LINC01116-202ENST00000339037 TCF21O43680 179 aa13.54□□□□□ -0.24
LINC01116-202ENST00000339037 NPIPB7O75200 414 aa13.54□□□□□ -0.24
LINC01116-202ENST00000339037 SLC22A3O75751 556 aa13.54□□□□□ -0.24
LINC01116-202ENST00000339037 AHSA1O95433 338 aa13.54□□□□□ -0.24
LINC01116-202ENST00000339037 CELA3BP08861 270 aa13.54□□□□□ -0.24
LINC01116-202ENST00000339037 PRG2P13727 222 aa13.54□□□□□ -0.24
LINC01116-202ENST00000339037 NPR2P20594 1047 aa13.54□□□□□ -0.24
LINC01116-202ENST00000339037 APEX1P27695 318 aaKnown RBP13.54□□□□□ -0.24
LINC01116-202ENST00000339037 SRP14P37108 136 aaKnown RBP13.54□□□□□ -0.24
LINC01116-202ENST00000339037 CRISP3P54108 245 aa13.54□□□□□ -0.24
LINC01116-202ENST00000339037 HGFACQ04756 655 aa13.54□□□□□ -0.24
LINC01116-202ENST00000339037 LARS2Q15031 903 aaKnown RBP13.54□□□□□ -0.24
LINC01116-202ENST00000339037 ZSWIM7Q19AV6 140 aa13.54□□□□□ -0.24
LINC01116-202ENST00000339037 GTDC1Q4AE62 458 aa13.54□□□□□ -0.24
LINC01116-202ENST00000339037 BEND6Q5SZJ8 279 aaPredicted RBP13.54□□□□□ -0.24
LINC01116-202ENST00000339037 RNF220Q5VTB9 566 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms