RNA–Protein interactions for RNA: ENST00000338963.6

NEDD4-201, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene NEDD4, Length 7,019 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-201ENST00000338963 HSPB2Q16082 182 aa3.84□□□□□ -1.79
NEDD4-201ENST00000338963 DECR1Q16698 335 aa3.84□□□□□ -1.79
NEDD4-201ENST00000338963 PRAMEF14Q5SWL7 426 aa3.84□□□□□ -1.79
NEDD4-201ENST00000338963 C1orf220Q5T0J3 134 aa3.84□□□□□ -1.79
NEDD4-201ENST00000338963 PRAMEF18Q5VWM3 479 aa3.84□□□□□ -1.79
NEDD4-201ENST00000338963 CYB5RLQ6IPT4 315 aa3.84□□□□□ -1.79
NEDD4-201ENST00000338963 OVCH1Q7RTY7 1134 aa3.84□□□□□ -1.79
NEDD4-201ENST00000338963 ANKRD33Q7Z3H0 272 aa3.84□□□□□ -1.79
NEDD4-201ENST00000338963 BIVMQ86UB2 503 aa3.84□□□□□ -1.79
NEDD4-201ENST00000338963 GLCCI1Q86VQ1 547 aa3.84□□□□□ -1.79
NEDD4-201ENST00000338963 IZUMO1Q8IYV9 350 aa3.84□□□□□ -1.79
NEDD4-201ENST00000338963 MMP21Q8N119 569 aa3.84□□□□□ -1.79
NEDD4-201ENST00000338963 TTC9BQ8N6N2 239 aa3.84□□□□□ -1.79
NEDD4-201ENST00000338963 OR52B6Q8NGF0 335 aa3.84□□□□□ -1.79
NEDD4-201ENST00000338963 OR4B1Q8NGF8 309 aa3.84□□□□□ -1.79
NEDD4-201ENST00000338963 CD200R1Q8TD46 325 aa3.84□□□□□ -1.79
NEDD4-201ENST00000338963 TSEN15Q8WW01 171 aaKnown RBP3.84□□□□□ -1.79
NEDD4-201ENST00000338963 COA7Q96BR5 231 aa3.84□□□□□ -1.79
NEDD4-201ENST00000338963 RPUSD4Q96CM3 377 aaKnown RBP3.84□□□□□ -1.79
NEDD4-201ENST00000338963 LPAR4Q99677 370 aa3.84□□□□□ -1.79
NEDD4-201ENST00000338963 CCDC3Q9BQI4 270 aa3.84□□□□□ -1.79
NEDD4-201ENST00000338963 ARHGAP9Q9BRR9 750 aa3.84□□□□□ -1.79
NEDD4-201ENST00000338963 ULBP1Q9BZM6 244 aa3.84□□□□□ -1.79
NEDD4-201ENST00000338963 CTDSP1Q9GZU7 261 aa3.84□□□□□ -1.79
NEDD4-201ENST00000338963 SLC25A31Q9H0C2 315 aa3.84□□□□□ -1.79
NEDD4-201ENST00000338963 SPHK2Q9NRA0 654 aa3.84□□□□□ -1.79
NEDD4-201ENST00000338963 RHCGQ9UBD6 479 aa3.84□□□□□ -1.79
NEDD4-201ENST00000338963 A0A1B0GVC2 190 aa3.84□□□□□ -1.79
NEDD4-201ENST00000338963 HAS3O00219 553 aa3.84□□□□□ -1.79
NEDD4-201ENST00000338963 MT-CO1P00395 513 aa3.84□□□□□ -1.79
NEDD4-201ENST00000338963 LRG1P02750 347 aa3.84□□□□□ -1.79
NEDD4-201ENST00000338963 HLA-DOAP06340 250 aa3.84□□□□□ -1.79
NEDD4-201ENST00000338963 CD14P08571 375 aa3.84□□□□□ -1.79
NEDD4-201ENST00000338963 ZBTB25P24278 435 aa3.84□□□□□ -1.79
NEDD4-201ENST00000338963 RAB28P51157 221 aa3.84□□□□□ -1.79
NEDD4-201ENST00000338963 SHBQ15464 509 aa3.84□□□□□ -1.79
NEDD4-201ENST00000338963 SLC5A12Q1EHB4 618 aa3.84□□□□□ -1.79
NEDD4-201ENST00000338963 FAM182AQ5T1J6 154 aa3.84□□□□□ -1.79
NEDD4-201ENST00000338963 SAMD13Q5VXD3 122 aa3.84□□□□□ -1.79
NEDD4-201ENST00000338963 SFXN4Q6P4A7 337 aa3.84□□□□□ -1.79
NEDD4-201ENST00000338963 TMEM179BQ7Z7N9 219 aa3.84□□□□□ -1.79
NEDD4-201ENST00000338963 HORMAD2Q8N7B1 307 aa3.84□□□□□ -1.79
NEDD4-201ENST00000338963 OR4K5Q8NGD3 323 aa3.84□□□□□ -1.79
NEDD4-201ENST00000338963 PROKR1Q8TCW9 393 aa3.84□□□□□ -1.79
NEDD4-201ENST00000338963 ASB11Q8WXH4 323 aa3.84□□□□□ -1.79
NEDD4-201ENST00000338963 FEVQ99581 238 aa3.84□□□□□ -1.79
NEDD4-201ENST00000338963 SPSB2Q99619 263 aa3.84□□□□□ -1.79
NEDD4-201ENST00000338963 NIPSNAP1Q9BPW8 284 aa3.84□□□□□ -1.79
NEDD4-201ENST00000338963 POLR3FQ9H1D9 316 aaPredicted RBP3.84□□□□□ -1.79
NEDD4-201ENST00000338963 APMAPQ9HDC9 416 aa3.84□□□□□ -1.79
NEDD4-201ENST00000338963 COLEC10Q9Y6Z7 277 aa3.84□□□□□ -1.79
NEDD4-201ENST00000338963 RIMS1Q86UR5 1692 aaKnown RBP3.84□□□□□ -1.79
NEDD4-201ENST00000338963 C2CD4BA6NLJ0 364 aa3.84□□□□□ -1.79
NEDD4-201ENST00000338963 GFRA2O00451 464 aa3.84□□□□□ -1.79
NEDD4-201ENST00000338963 F13BP05160 661 aa3.84□□□□□ -1.79
NEDD4-201ENST00000338963 CD5P06127 495 aa3.84□□□□□ -1.79
NEDD4-201ENST00000338963 MMP7P09237 267 aaPredicted RBP3.84□□□□□ -1.79
NEDD4-201ENST00000338963 TDGF1P13385 188 aa3.84□□□□□ -1.79
NEDD4-201ENST00000338963 MC5RP33032 325 aa3.84□□□□□ -1.79
NEDD4-201ENST00000338963 BTCP35070 178 aa3.84□□□□□ -1.79
NEDD4-201ENST00000338963 CX3CR1P49238 355 aa3.84□□□□□ -1.79
NEDD4-201ENST00000338963 CLDN18P56856 261 aa3.84□□□□□ -1.79
NEDD4-201ENST00000338963 ACTA2P62736 377 aa3.84□□□□□ -1.79
NEDD4-201ENST00000338963 ACTG2P63267 376 aa3.84□□□□□ -1.79
NEDD4-201ENST00000338963 ACTC1P68032 377 aa3.84□□□□□ -1.79
NEDD4-201ENST00000338963 ACTA1P68133 377 aa3.84□□□□□ -1.79
NEDD4-201ENST00000338963 PRAMEF17Q5VTA0 474 aa3.84□□□□□ -1.79
NEDD4-201ENST00000338963 C12orf73Q69YU5 71 aa3.84□□□□□ -1.79
NEDD4-201ENST00000338963 TCF24Q7RTU0 167 aa3.84□□□□□ -1.79
NEDD4-201ENST00000338963 TMED4Q7Z7H5 227 aa3.84□□□□□ -1.79
NEDD4-201ENST00000338963 ZNF687Q8N1G0 1237 aa3.84□□□□□ -1.79
NEDD4-201ENST00000338963 SUMF2Q8NBJ7 301 aa3.84□□□□□ -1.79
NEDD4-201ENST00000338963 STEAP2Q8NFT2 490 aa3.84□□□□□ -1.79
NEDD4-201ENST00000338963 OR8G5Q8NG78 346 aa3.84□□□□□ -1.79
NEDD4-201ENST00000338963 OR4D6Q8NGJ1 314 aa3.84□□□□□ -1.79
NEDD4-201ENST00000338963 SUN3Q8TAQ9 357 aa3.84□□□□□ -1.79
NEDD4-201ENST00000338963 ADIPOR1Q96A54 375 aa3.84□□□□□ -1.79
NEDD4-201ENST00000338963 CCDC74AQ96AQ1 378 aa3.84□□□□□ -1.79
NEDD4-201ENST00000338963 MOB3AQ96BX8 217 aa3.84□□□□□ -1.79
NEDD4-201ENST00000338963 PIK3IP1Q96FE7 263 aa3.84□□□□□ -1.79
NEDD4-201ENST00000338963 RSRP1Q9BUV0 290 aa3.84□□□□□ -1.79
NEDD4-201ENST00000338963 PORCNQ9H237 461 aa3.84□□□□□ -1.79
NEDD4-201ENST00000338963 PLEKHA2Q9HB19 425 aa3.84□□□□□ -1.79
NEDD4-201ENST00000338963 ZCCHC3Q9NUD5 404 aaKnown RBP3.84□□□□□ -1.79
NEDD4-201ENST00000338963 LPAR3Q9UBY5 353 aa3.84□□□□□ -1.79
NEDD4-201ENST00000338963 ZNF230Q9UIE0 474 aaPredicted RBP3.84□□□□□ -1.79
NEDD4-201ENST00000338963 GABRQQ9UN88 632 aa3.84□□□□□ -1.79
NEDD4-201ENST00000338963 FAM50BQ9Y247 325 aa3.84□□□□□ -1.79
NEDD4-201ENST00000338963 MAGEB17A8MXT2 336 aa3.84□□□□□ -1.79
NEDD4-201ENST00000338963 ASGR2P07307 311 aa3.84□□□□□ -1.79
NEDD4-201ENST00000338963 FOLR1P15328 257 aa3.84□□□□□ -1.79
NEDD4-201ENST00000338963 IMPA1P29218 277 aa3.84□□□□□ -1.79
NEDD4-201ENST00000338963 CORO1AP31146 461 aaKnown RBP3.84□□□□□ -1.79
NEDD4-201ENST00000338963 SMSP52788 366 aa3.84□□□□□ -1.79
NEDD4-201ENST00000338963 ST8SIA6P61647 398 aa3.84□□□□□ -1.79
NEDD4-201ENST00000338963 TMEM255AQ5JRV8 349 aa3.84□□□□□ -1.79
NEDD4-201ENST00000338963 PLEKHS1Q5SXH7 462 aa3.84□□□□□ -1.79
NEDD4-201ENST00000338963 CNKSR3Q6P9H4 555 aa3.84□□□□□ -1.79
NEDD4-201ENST00000338963 FAM151BQ6UXP7 276 aa3.84□□□□□ -1.79
NEDD4-201ENST00000338963 OR5L1Q8NGL2 311 aa3.84□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms