RNA–Protein interactions for RNA: ENST00000338468.7

PRKN-201, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 1,276 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-201ENST00000338468 KDELR2P33947 212 aa13.42□□□□□ -0.26
PRKN-201ENST00000338468 SELENOPP49908 381 aa13.42□□□□□ -0.26
PRKN-201ENST00000338468 ADAM8P78325 824 aa13.42□□□□□ -0.26
PRKN-201ENST00000338468 STK11Q15831 433 aa13.42□□□□□ -0.26
PRKN-201ENST00000338468 GABRA6Q16445 453 aa13.42□□□□□ -0.26
PRKN-201ENST00000338468 ACKR1Q16570 336 aa13.42□□□□□ -0.26
PRKN-201ENST00000338468 TIMM23BQ5SRD1 257 aa13.42□□□□□ -0.26
PRKN-201ENST00000338468 NCMAPQ5T1S8 102 aa13.42□□□□□ -0.26
PRKN-201ENST00000338468 NHLRC1Q6VVB1 395 aa13.42□□□□□ -0.26
PRKN-201ENST00000338468 HACD2Q6Y1H2 254 aa13.42□□□□□ -0.26
PRKN-201ENST00000338468 AAED1Q7RTV5 226 aa13.42□□□□□ -0.26
PRKN-201ENST00000338468 CARM1Q86X55 608 aa13.42□□□□□ -0.26
PRKN-201ENST00000338468 LILRB1Q8NHL6 650 aaPredicted RBP13.42□□□□□ -0.26
PRKN-201ENST00000338468 RNF217Q8TC41 542 aa13.42□□□□□ -0.26
PRKN-201ENST00000338468 RASSF5Q8WWW0 418 aa13.42□□□□□ -0.26
PRKN-201ENST00000338468 MUS81Q96NY9 551 aa13.42□□□□□ -0.26
PRKN-201ENST00000338468 PRSS27Q9BQR3 290 aa13.42□□□□□ -0.26
PRKN-201ENST00000338468 ZNF426Q9BUY5 554 aa13.42□□□□□ -0.26
PRKN-201ENST00000338468 AMBRA1Q9C0C7 1298 aa13.42□□□□□ -0.26
PRKN-201ENST00000338468 NSRP1Q9H0G5 558 aaKnown RBP13.42□□□□□ -0.26
PRKN-201ENST00000338468 SLCO5A1Q9H2Y9 848 aa13.42□□□□□ -0.26
PRKN-201ENST00000338468 UBTD1Q9HAC8 227 aa13.42□□□□□ -0.26
PRKN-201ENST00000338468 EFCAB1Q9HAE3 211 aa13.42□□□□□ -0.26
PRKN-201ENST00000338468 TAS2R16Q9NYV7 291 aa13.42□□□□□ -0.26
PRKN-201ENST00000338468 NPAP1Q9NZP6 1156 aa13.42□□□□□ -0.26
PRKN-201ENST00000338468 SELENONQ9NZV5 590 aa13.42□□□□□ -0.26
PRKN-201ENST00000338468 B3GALT5Q9Y2C3 310 aa13.42□□□□□ -0.26
PRKN-201ENST00000338468 LOC102725191A0A1B0GVB3 256 aa13.41□□□□□ -0.26
PRKN-201ENST00000338468 ELOVL7A1L3X0 281 aa13.41□□□□□ -0.26
PRKN-201ENST00000338468 TRAPPC13A5PLN9 417 aa13.41□□□□□ -0.26
PRKN-201ENST00000338468 DPRXA6NFQ7 191 aa13.41□□□□□ -0.26
PRKN-201ENST00000338468 MS4A18H0YCH9 400 aa13.41□□□□□ -0.26
PRKN-201ENST00000338468 SHOX2O60902 331 aaPredicted RBP13.41□□□□□ -0.26
PRKN-201ENST00000338468 ZNF432O94892 652 aa13.41□□□□□ -0.26
PRKN-201ENST00000338468 SLC7A2P52569 658 aa13.41□□□□□ -0.26
PRKN-201ENST00000338468 NR1H2P55055 460 aa13.41□□□□□ -0.26
PRKN-201ENST00000338468 LIPEQ05469 1076 aa13.41□□□□□ -0.26
PRKN-201ENST00000338468 KEAP1Q14145 624 aa13.41□□□□□ -0.26
PRKN-201ENST00000338468 PPA1Q15181 289 aa13.41□□□□□ -0.26
PRKN-201ENST00000338468 DEFB113Q30KQ7 82 aa13.41□□□□□ -0.26
PRKN-201ENST00000338468 MS4A18Q3C1V0 323 aa13.41□□□□□ -0.26
PRKN-201ENST00000338468 CYBRD1Q53TN4 286 aa13.41□□□□□ -0.26
PRKN-201ENST00000338468 C9orf135Q5VTT2 229 aa13.41□□□□□ -0.26
PRKN-201ENST00000338468 ZNF704Q6ZNC4 412 aaPredicted RBP13.41□□□□□ -0.26
PRKN-201ENST00000338468 H1FNTQ75WM6 255 aaPredicted RBP13.41□□□□□ -0.26
PRKN-201ENST00000338468 LINGO2Q7L985 606 aa13.41□□□□□ -0.26
PRKN-201ENST00000338468 ARPINQ7Z6K5 226 aa13.41□□□□□ -0.26
PRKN-201ENST00000338468 PIGWQ7Z7B1 504 aa13.41□□□□□ -0.26
PRKN-201ENST00000338468 CPLX4Q7Z7G2 160 aa13.41□□□□□ -0.26
PRKN-201ENST00000338468 P2RY8Q86VZ1 359 aa13.41□□□□□ -0.26
PRKN-201ENST00000338468 WDR31Q8NA23 367 aa13.41□□□□□ -0.26
PRKN-201ENST00000338468 ADPRHL1Q8NDY3 354 aa13.41□□□□□ -0.26
PRKN-201ENST00000338468 IGFBPL1Q8WX77 278 aa13.41□□□□□ -0.26
PRKN-201ENST00000338468 OXGR1Q96P68 337 aa13.41□□□□□ -0.26
PRKN-201ENST00000338468 EPYCQ99645 322 aa13.41□□□□□ -0.26
PRKN-201ENST00000338468 HOPXQ9BPY8 73 aaPredicted RBP13.41□□□□□ -0.26
PRKN-201ENST00000338468 SLC7A7Q9UM01 511 aa13.41□□□□□ -0.26
PRKN-201ENST00000338468 SH3GLB1Q9Y371 365 aa13.41□□□□□ -0.26
PRKN-201ENST00000338468 SLC25A15Q9Y619 301 aa13.41□□□□□ -0.26
PRKN-201ENST00000338468 DYNC1I1O14576 645 aa13.4□□□□□ -0.26
PRKN-201ENST00000338468 TRAF3IP2O43734 574 aaPredicted RBP13.4□□□□□ -0.26
PRKN-201ENST00000338468 UPK3AO75631 287 aa13.4□□□□□ -0.26
PRKN-201ENST00000338468 HLA-DOBP13765 273 aa13.4□□□□□ -0.26
PRKN-201ENST00000338468 GTF2E2P29084 291 aaKnown RBP13.4□□□□□ -0.26
PRKN-201ENST00000338468 PRDX6P30041 224 aa13.4□□□□□ -0.26
PRKN-201ENST00000338468 OR1E2P47887 323 aa13.4□□□□□ -0.26
PRKN-201ENST00000338468 GSK3BP49841 420 aa13.4□□□□□ -0.26
PRKN-201ENST00000338468 NUDT2P50583 147 aa13.4□□□□□ -0.26
PRKN-201ENST00000338468 CLDN17P56750 224 aa13.4□□□□□ -0.26
PRKN-201ENST00000338468 SLC25A3Q00325 362 aa13.4□□□□□ -0.26
PRKN-201ENST00000338468 LRRC23Q53EV4 343 aaPredicted RBP13.4□□□□□ -0.26
PRKN-201ENST00000338468 NIPAL3Q6P499 406 aa13.4□□□□□ -0.26
PRKN-201ENST00000338468 WDFY1Q8IWB7 410 aa13.4□□□□□ -0.26
PRKN-201ENST00000338468 SCAIQ8N9R8 606 aa13.4□□□□□ -0.26
PRKN-201ENST00000338468 POMGNT2Q8NAT1 580 aa13.4□□□□□ -0.26
PRKN-201ENST00000338468 PROX1Q92786 737 aa13.4□□□□□ -0.26
PRKN-201ENST00000338468 CMTM5Q96DZ9 223 aa13.4□□□□□ -0.26
PRKN-201ENST00000338468 MRPL39Q9NYK5 338 aaKnown RBP13.4□□□□□ -0.26
PRKN-201ENST00000338468 ABCD2Q9UBJ2 740 aa13.4□□□□□ -0.26
PRKN-201ENST00000338468 UPB1Q9UBR1 384 aa13.4□□□□□ -0.26
PRKN-201ENST00000338468 BAG5Q9UL15 447 aa13.4□□□□□ -0.26
PRKN-201ENST00000338468 AP3M1Q9Y2T2 418 aa13.4□□□□□ -0.26
PRKN-201ENST00000338468 CORINQ9Y5Q5 1042 aa13.4□□□□□ -0.26
PRKN-201ENST00000338468 CADP27708 2225 aa13.4□□□□□ -0.26
PRKN-201ENST00000338468 A0A1W2PR80 420 aa13.39□□□□□ -0.27
PRKN-201ENST00000338468 CIB4A0PJX0 185 aa13.39□□□□□ -0.27
PRKN-201ENST00000338468 ZNF43P17038 809 aa13.39□□□□□ -0.27
PRKN-201ENST00000338468 FUT4P22083 530 aa13.39□□□□□ -0.27
PRKN-201ENST00000338468 MPGP29372 298 aa13.39□□□□□ -0.27
PRKN-201ENST00000338468 BSPH1Q075Z2 132 aa13.39□□□□□ -0.27
PRKN-201ENST00000338468 MFSD13AQ14CX5 517 aa13.39□□□□□ -0.27
PRKN-201ENST00000338468 KRTAP1-3Q8IUG1 177 aa13.39□□□□□ -0.27
PRKN-201ENST00000338468 OR52N5Q8NH56 324 aa13.39□□□□□ -0.27
PRKN-201ENST00000338468 NEUROG1Q92886 237 aa13.39□□□□□ -0.27
PRKN-201ENST00000338468 BOD1Q96IK1 185 aa13.39□□□□□ -0.27
PRKN-201ENST00000338468 MPP4Q96JB8 637 aa13.39□□□□□ -0.27
PRKN-201ENST00000338468 MEPEQ9NQ76 525 aaPredicted RBP13.39□□□□□ -0.27
PRKN-201ENST00000338468 RCE1Q9Y256 329 aa13.39□□□□□ -0.27
PRKN-201ENST00000338468 CXCR6O00574 342 aa13.38□□□□□ -0.27
PRKN-201ENST00000338468 PLPP3O14495 311 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms