RNA–Protein interactions for RNA: ENST00000338399.8

CDK5RAP3-201, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK5RAP3, Length 1,866 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-201ENST00000338399 EIF2S3P41091 472 aaKnown RBP13.26□□□□□ -0.29
CDK5RAP3-201ENST00000338399 OR2B6P58173 313 aa13.26□□□□□ -0.29
CDK5RAP3-201ENST00000338399 PLGLB1Q02325 96 aa13.26□□□□□ -0.29
CDK5RAP3-201ENST00000338399 ITGADQ13349 1161 aa13.26□□□□□ -0.29
CDK5RAP3-201ENST00000338399 CRMP1Q14194 572 aa13.26□□□□□ -0.29
CDK5RAP3-201ENST00000338399 AADACL4Q5VUY2 407 aa13.26□□□□□ -0.29
CDK5RAP3-201ENST00000338399 PNPLA5Q7Z6Z6 429 aaPredicted RBP13.26□□□□□ -0.29
CDK5RAP3-201ENST00000338399 SPARTQ8N0X7 666 aa13.26□□□□□ -0.29
CDK5RAP3-201ENST00000338399 CYB561A3Q8NBI2 242 aa13.26□□□□□ -0.29
CDK5RAP3-201ENST00000338399 FAM98AQ8NCA5 519 aaKnown RBP13.26□□□□□ -0.29
CDK5RAP3-201ENST00000338399 SDR9C7Q8NEX9 313 aa13.26□□□□□ -0.29
CDK5RAP3-201ENST00000338399 RASD2Q96D21 266 aa13.26□□□□□ -0.29
CDK5RAP3-201ENST00000338399 DCBLD2Q96PD2 775 aa13.26□□□□□ -0.29
CDK5RAP3-201ENST00000338399 NDEL1Q9GZM8 345 aa13.26□□□□□ -0.29
CDK5RAP3-201ENST00000338399 FN3KQ9H479 309 aa13.26□□□□□ -0.29
CDK5RAP3-201ENST00000338399 CCNB1IP1Q9NPC3 277 aa13.26□□□□□ -0.29
CDK5RAP3-201ENST00000338399 FKBP14Q9NWM8 211 aa13.26□□□□□ -0.29
CDK5RAP3-201ENST00000338399 ALKBH4Q9NXW9 302 aa13.26□□□□□ -0.29
CDK5RAP3-201ENST00000338399 SLC6A5Q9Y345 797 aa13.26□□□□□ -0.29
CDK5RAP3-201ENST00000338399 HDGFL3Q9Y3E1 203 aa13.26□□□□□ -0.29
CDK5RAP3-201ENST00000338399 RPL36Q9Y3U8 105 aaKnown RBP13.26□□□□□ -0.29
CDK5RAP3-201ENST00000338399 SNX5Q9Y5X3 404 aa13.26□□□□□ -0.29
CDK5RAP3-201ENST00000338399 SPTBN4Q9H254 2564 aa13.26□□□□□ -0.29
CDK5RAP3-201ENST00000338399 TEX13CA0A0J9YWL9 993 aa13.25□□□□□ -0.29
CDK5RAP3-201ENST00000338399 DPPA5A6NC42 116 aa13.25□□□□□ -0.29
CDK5RAP3-201ENST00000338399 PRR23D1E9PI22 279 aaPredicted RBP13.25□□□□□ -0.29
CDK5RAP3-201ENST00000338399 MS4A18H0YCH9 400 aa13.25□□□□□ -0.29
CDK5RAP3-201ENST00000338399 PRODHO43272 600 aa13.25□□□□□ -0.29
CDK5RAP3-201ENST00000338399 RGS10O43665 173 aa13.25□□□□□ -0.29
CDK5RAP3-201ENST00000338399 IDH3BO43837 385 aa13.25□□□□□ -0.29
CDK5RAP3-201ENST00000338399 AKR7A3O95154 331 aa13.25□□□□□ -0.29
CDK5RAP3-201ENST00000338399 PLGP00747 810 aaPredicted RBP13.25□□□□□ -0.29
CDK5RAP3-201ENST00000338399 PRR23D2P0DMB1 279 aaPredicted RBP13.25□□□□□ -0.29
CDK5RAP3-201ENST00000338399 DBTP11182 482 aaKnown RBP13.25□□□□□ -0.29
CDK5RAP3-201ENST00000338399 ID4P47928 161 aa13.25□□□□□ -0.29
CDK5RAP3-201ENST00000338399 RAC1P63000 192 aa13.25□□□□□ -0.29
CDK5RAP3-201ENST00000338399 MVKQ03426 396 aa13.25□□□□□ -0.29
CDK5RAP3-201ENST00000338399 ZNF91Q05481 1191 aa13.25□□□□□ -0.29
CDK5RAP3-201ENST00000338399 KHDRBS1Q07666 443 aaKnown RBP eCLIP13.25□□□□□ -0.29
CDK5RAP3-201ENST00000338399 DBPQ10586 325 aaPredicted RBP13.25□□□□□ -0.29
CDK5RAP3-201ENST00000338399 MS4A18Q3C1V0 323 aa13.25□□□□□ -0.29
CDK5RAP3-201ENST00000338399 NXNL2Q5VZ03 156 aa13.25□□□□□ -0.29
CDK5RAP3-201ENST00000338399 KCTD8Q6ZWB6 473 aa13.25□□□□□ -0.29
CDK5RAP3-201ENST00000338399 H1FNTQ75WM6 255 aaPredicted RBP13.25□□□□□ -0.29
CDK5RAP3-201ENST00000338399 FAM122BQ7Z309 247 aa13.25□□□□□ -0.29
CDK5RAP3-201ENST00000338399 KDM8Q8N371 416 aa13.25□□□□□ -0.29
CDK5RAP3-201ENST00000338399 TMEM251Q8N6I4 163 aa13.25□□□□□ -0.29
CDK5RAP3-201ENST00000338399 SCAIQ8N9R8 606 aa13.25□□□□□ -0.29
CDK5RAP3-201ENST00000338399 TMEM178AQ8NBL3 297 aa13.25□□□□□ -0.29
CDK5RAP3-201ENST00000338399 SLC37A3Q8NCC5 494 aa13.25□□□□□ -0.29
CDK5RAP3-201ENST00000338399 PTP4A1Q93096 173 aa13.25□□□□□ -0.29
CDK5RAP3-201ENST00000338399 DTNBP1Q96EV8 351 aa13.25□□□□□ -0.29
CDK5RAP3-201ENST00000338399 SFXN2Q96NB2 322 aa13.25□□□□□ -0.29
CDK5RAP3-201ENST00000338399 TSPAN32Q96QS1 320 aa13.25□□□□□ -0.29
CDK5RAP3-201ENST00000338399 HCAR1Q9BXC0 346 aa13.25□□□□□ -0.29
CDK5RAP3-201ENST00000338399 CHST11Q9NPF2 352 aa13.25□□□□□ -0.29
CDK5RAP3-201ENST00000338399 BATF3Q9NR55 127 aa13.25□□□□□ -0.29
CDK5RAP3-201ENST00000338399 INIPQ9NRY2 104 aa13.25□□□□□ -0.29
CDK5RAP3-201ENST00000338399 H2AFY2Q9P0M6 372 aaPredicted RBP13.25□□□□□ -0.29
CDK5RAP3-201ENST00000338399 DKK4Q9UBT3 224 aa13.25□□□□□ -0.29
CDK5RAP3-201ENST00000338399 KLHL21Q9UJP4 597 aa13.25□□□□□ -0.29
CDK5RAP3-201ENST00000338399 APC2O95996 2303 aa13.25□□□□□ -0.29
CDK5RAP3-201ENST00000338399 EFCAB10A6NFE3 127 aa13.25□□□□□ -0.29
CDK5RAP3-201ENST00000338399 MT-ND2P03891 347 aa13.25□□□□□ -0.29
CDK5RAP3-201ENST00000338399 STSP08842 583 aa13.25□□□□□ -0.29
CDK5RAP3-201ENST00000338399 CELA3AP09093 270 aa13.25□□□□□ -0.29
CDK5RAP3-201ENST00000338399 APEHP13798 732 aaKnown RBP13.25□□□□□ -0.29
CDK5RAP3-201ENST00000338399 C21orf33P30042 268 aaPredicted RBP13.25□□□□□ -0.29
CDK5RAP3-201ENST00000338399 SDHAP31040 664 aa13.25□□□□□ -0.29
CDK5RAP3-201ENST00000338399 MAGEA5P43359 124 aa13.25□□□□□ -0.29
CDK5RAP3-201ENST00000338399 SLC15A1P46059 708 aa13.25□□□□□ -0.29
CDK5RAP3-201ENST00000338399 RPL5P46777 297 aaKnown RBP13.25□□□□□ -0.29
CDK5RAP3-201ENST00000338399 DIO1P49895 249 aa13.25□□□□□ -0.29
CDK5RAP3-201ENST00000338399 NR1H2P55055 460 aa13.25□□□□□ -0.29
CDK5RAP3-201ENST00000338399 CDH11P55287 796 aa13.25□□□□□ -0.29
CDK5RAP3-201ENST00000338399 TLE3Q04726 772 aa13.25□□□□□ -0.29
CDK5RAP3-201ENST00000338399 ST3GAL4Q11206 333 aa13.25□□□□□ -0.29
CDK5RAP3-201ENST00000338399 TMPPEQ6ZT21 453 aa13.25□□□□□ -0.29
CDK5RAP3-201ENST00000338399 GHDCQ8N2G8 530 aa13.25□□□□□ -0.29
CDK5RAP3-201ENST00000338399 STX19Q8N4C7 294 aa13.25□□□□□ -0.29
CDK5RAP3-201ENST00000338399 LSM14AQ8ND56 463 aaKnown RBP13.25□□□□□ -0.29
CDK5RAP3-201ENST00000338399 MYDGFQ969H8 173 aa13.25□□□□□ -0.29
CDK5RAP3-201ENST00000338399 SMAD5Q99717 465 aaKnown RBP13.25□□□□□ -0.29
CDK5RAP3-201ENST00000338399 GRHPRQ9UBQ7 328 aa13.25□□□□□ -0.29
CDK5RAP3-201ENST00000338399 ZNF346Q9UL40 294 aaKnown RBP13.25□□□□□ -0.29
CDK5RAP3-201ENST00000338399 CFAP47Q6ZTR5 3102 aa13.25□□□□□ -0.29
CDK5RAP3-201ENST00000338399 SNTNA6NMZ2 147 aa13.24□□□□□ -0.29
CDK5RAP3-201ENST00000338399 SULT2B1O00204 365 aa13.24□□□□□ -0.29
CDK5RAP3-201ENST00000338399 IMPA2O14732 288 aa13.24□□□□□ -0.29
CDK5RAP3-201ENST00000338399 GLSO94925 669 aaPredicted RBP13.24□□□□□ -0.29
CDK5RAP3-201ENST00000338399 HPNP05981 417 aa13.24□□□□□ -0.29
CDK5RAP3-201ENST00000338399 CDK1P06493 297 aa13.24□□□□□ -0.29
CDK5RAP3-201ENST00000338399 ACVR2AP27037 513 aa13.24□□□□□ -0.29
CDK5RAP3-201ENST00000338399 CD97P48960 835 aa13.24□□□□□ -0.29
CDK5RAP3-201ENST00000338399 PPIAP62937 165 aaKnown RBP13.24□□□□□ -0.29
CDK5RAP3-201ENST00000338399 PUDPQ08623 228 aa13.24□□□□□ -0.29
CDK5RAP3-201ENST00000338399 ZP4Q12836 540 aa13.24□□□□□ -0.29
CDK5RAP3-201ENST00000338399 PRSS48Q7RTY5 328 aa13.24□□□□□ -0.29
CDK5RAP3-201ENST00000338399 TMEM99Q8N816 258 aa13.24□□□□□ -0.29
CDK5RAP3-201ENST00000338399 ZFP62Q8NB50 900 aaPredicted RBP13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms