RNA–Protein interactions for RNA: ENST00000337841.4

SPTLC1-202, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SPTLC1, Length 946 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-202ENST00000337841 NOSIPQ9Y314 301 aaKnown RBP10.61□□□□□ -0.71
SPTLC1-202ENST00000337841 TRBV4-1A0A0J9YWV2 114 aa10.6□□□□□ -0.71
SPTLC1-202ENST00000337841 ZNF716A6NP11 495 aa10.6□□□□□ -0.71
SPTLC1-202ENST00000337841 ZNF814B7Z6K7 855 aa10.6□□□□□ -0.71
SPTLC1-202ENST00000337841 LRRN3E7EW58 273 aa10.6□□□□□ -0.71
SPTLC1-202ENST00000337841 MS4A18H0YCH9 400 aa10.6□□□□□ -0.71
SPTLC1-202ENST00000337841 BLOC1S5-TXNDC5H3BN57 136 aa10.6□□□□□ -0.71
SPTLC1-202ENST00000337841 MSTNO14793 375 aa10.6□□□□□ -0.71
SPTLC1-202ENST00000337841 OR10H3O60404 316 aa10.6□□□□□ -0.71
SPTLC1-202ENST00000337841 MRPL33O75394 65 aaKnown RBP10.6□□□□□ -0.71
SPTLC1-202ENST00000337841 DEAF1O75398 565 aaPredicted RBP10.6□□□□□ -0.71
SPTLC1-202ENST00000337841 TNFSF13O75888 250 aa10.6□□□□□ -0.71
SPTLC1-202ENST00000337841 SMNDC1O75940 238 aaKnown RBP eCLIP10.6□□□□□ -0.71
SPTLC1-202ENST00000337841 CCNB2O95067 398 aa10.6□□□□□ -0.71
SPTLC1-202ENST00000337841 ASAH2BP0C7U1 165 aa10.6□□□□□ -0.71
SPTLC1-202ENST00000337841 ADORA3P0DMS8 318 aa10.6□□□□□ -0.71
SPTLC1-202ENST00000337841 SAGP10523 405 aaPredicted RBP10.6□□□□□ -0.71
SPTLC1-202ENST00000337841 KLK2P20151 261 aa10.6□□□□□ -0.71
SPTLC1-202ENST00000337841 FUT4P22083 530 aa10.6□□□□□ -0.71
SPTLC1-202ENST00000337841 AHCYP23526 432 aa10.6□□□□□ -0.71
SPTLC1-202ENST00000337841 SLC9A3P48764 834 aa10.6□□□□□ -0.71
SPTLC1-202ENST00000337841 ARHGDIAP52565 204 aa10.6□□□□□ -0.71
SPTLC1-202ENST00000337841 ZP4Q12836 540 aa10.6□□□□□ -0.71
SPTLC1-202ENST00000337841 KPNB1Q14974 876 aaKnown RBP10.6□□□□□ -0.71
SPTLC1-202ENST00000337841 EXOC3L2Q2M3D2 409 aa10.6□□□□□ -0.71
SPTLC1-202ENST00000337841 MS4A18Q3C1V0 323 aa10.6□□□□□ -0.71
SPTLC1-202ENST00000337841 ANKDD1AQ495B1 522 aa10.6□□□□□ -0.71
SPTLC1-202ENST00000337841 ABLIM2Q6H8Q1 611 aa10.6□□□□□ -0.71
SPTLC1-202ENST00000337841 TMPRSS11FQ6ZWK6 438 aa10.6□□□□□ -0.71
SPTLC1-202ENST00000337841 SLC46A3Q7Z3Q1 461 aa10.6□□□□□ -0.71
SPTLC1-202ENST00000337841 NANOGNBQ7Z5D8 188 aa10.6□□□□□ -0.71
SPTLC1-202ENST00000337841 BTLAQ7Z6A9 289 aa10.6□□□□□ -0.71
SPTLC1-202ENST00000337841 STK32CQ86UX6 486 aa10.6□□□□□ -0.71
SPTLC1-202ENST00000337841 LIX1LQ8IVB5 337 aa10.6□□□□□ -0.71
SPTLC1-202ENST00000337841 UEVLDQ8IX04 471 aa10.6□□□□□ -0.71
SPTLC1-202ENST00000337841 ZNF100Q8IYN0 542 aa10.6□□□□□ -0.71
SPTLC1-202ENST00000337841 KDM8Q8N371 416 aa10.6□□□□□ -0.71
SPTLC1-202ENST00000337841 LRRC17Q8N6Y2 441 aa10.6□□□□□ -0.71
SPTLC1-202ENST00000337841 OR4K5Q8NGD3 323 aa10.6□□□□□ -0.71
SPTLC1-202ENST00000337841 OR9K2Q8NGE7 335 aa10.6□□□□□ -0.71
SPTLC1-202ENST00000337841 SLCO4A1Q96BD0 722 aa10.6□□□□□ -0.71
SPTLC1-202ENST00000337841 FUZQ9BT04 418 aa10.6□□□□□ -0.71
SPTLC1-202ENST00000337841 FANCFQ9NPI8 374 aa10.6□□□□□ -0.71
SPTLC1-202ENST00000337841 C20orf141Q9NUB4 165 aa10.6□□□□□ -0.71
SPTLC1-202ENST00000337841 ARMC1Q9NVT9 282 aa10.6□□□□□ -0.71
SPTLC1-202ENST00000337841 SAMHD1Q9Y3Z3 626 aaKnown RBP10.6□□□□□ -0.71
SPTLC1-202ENST00000337841 NOX1Q9Y5S8 564 aa10.6□□□□□ -0.71
SPTLC1-202ENST00000337841 LYVE1Q9Y5Y7 322 aa10.6□□□□□ -0.71
SPTLC1-202ENST00000337841 CLOCKO15516 846 aa10.59□□□□□ -0.71
SPTLC1-202ENST00000337841 RNF13O43567 381 aa10.59□□□□□ -0.71
SPTLC1-202ENST00000337841 PIP5K1CO60331 668 aa10.59□□□□□ -0.71
SPTLC1-202ENST00000337841 RAMP1O60894 148 aa10.59□□□□□ -0.71
SPTLC1-202ENST00000337841 E2F6O75461 281 aa10.59□□□□□ -0.71
SPTLC1-202ENST00000337841 CD8BP10966 210 aa10.59□□□□□ -0.71
SPTLC1-202ENST00000337841 FCGR1AP12314 374 aa10.59□□□□□ -0.71
SPTLC1-202ENST00000337841 FASP25445 335 aa10.59□□□□□ -0.71
SPTLC1-202ENST00000337841 AGTR1P30556 359 aa10.59□□□□□ -0.71
SPTLC1-202ENST00000337841 DNAJA1P31689 397 aaKnown RBP10.59□□□□□ -0.71
SPTLC1-202ENST00000337841 P2RY4P51582 365 aa10.59□□□□□ -0.71
SPTLC1-202ENST00000337841 PUDPQ08623 228 aa10.59□□□□□ -0.71
SPTLC1-202ENST00000337841 POU4F3Q15319 338 aa10.59□□□□□ -0.71
SPTLC1-202ENST00000337841 SEC23BQ15437 767 aa10.59□□□□□ -0.71
SPTLC1-202ENST00000337841 GUSBP1Q15486 140 aa10.59□□□□□ -0.71
SPTLC1-202ENST00000337841 ZFP1Q6P2D0 407 aa10.59□□□□□ -0.71
SPTLC1-202ENST00000337841 CREB3L2Q70SY1 520 aa10.59□□□□□ -0.71
SPTLC1-202ENST00000337841 AAED1Q7RTV5 226 aa10.59□□□□□ -0.71
SPTLC1-202ENST00000337841 NUFIP2Q7Z417 695 aaKnown RBP10.59□□□□□ -0.71
SPTLC1-202ENST00000337841 PXKQ7Z7A4 578 aa10.59□□□□□ -0.71
SPTLC1-202ENST00000337841 OAFQ86UD1 273 aa10.59□□□□□ -0.71
SPTLC1-202ENST00000337841 LSRQ86X29 649 aaPredicted RBP10.59□□□□□ -0.71
SPTLC1-202ENST00000337841 GNPDA2Q8TDQ7 276 aa10.59□□□□□ -0.71
SPTLC1-202ENST00000337841 BDH2Q9BUT1 245 aa10.59□□□□□ -0.71
SPTLC1-202ENST00000337841 UCK2Q9BZX2 261 aa10.59□□□□□ -0.71
SPTLC1-202ENST00000337841 NDEL1Q9GZM8 345 aa10.59□□□□□ -0.71
SPTLC1-202ENST00000337841 DENND2DQ9H6A0 471 aaPredicted RBP10.59□□□□□ -0.71
SPTLC1-202ENST00000337841 ING1Q9UK53 422 aaPredicted RBP10.59□□□□□ -0.71
SPTLC1-202ENST00000337841 FLVCR1Q9Y5Y0 555 aa10.59□□□□□ -0.71
SPTLC1-202ENST00000337841 ERICH4A6NGS2 130 aa10.58□□□□□ -0.72
SPTLC1-202ENST00000337841 ZNF726A6NNF4 738 aa10.58□□□□□ -0.72
SPTLC1-202ENST00000337841 FAM90A27PA6NNH2 459 aa10.58□□□□□ -0.72
SPTLC1-202ENST00000337841 A8MXE2 369 aa10.58□□□□□ -0.72
SPTLC1-202ENST00000337841 EEF1E1-BLOC1S5C9J1V9 151 aa10.58□□□□□ -0.72
SPTLC1-202ENST00000337841 C11orf98E9PRG8 122 aa10.58□□□□□ -0.72
SPTLC1-202ENST00000337841 EEF1E1O43324 174 aaKnown RBP10.58□□□□□ -0.72
SPTLC1-202ENST00000337841 AKAP8O43823 692 aaKnown RBP10.58□□□□□ -0.72
SPTLC1-202ENST00000337841 TIPRLO75663 272 aa10.58□□□□□ -0.72
SPTLC1-202ENST00000337841 MAKP20794 623 aa10.58□□□□□ -0.72
SPTLC1-202ENST00000337841 OMPP47874 163 aa10.58□□□□□ -0.72
SPTLC1-202ENST00000337841 LIMS1P48059 325 aa10.58□□□□□ -0.72
SPTLC1-202ENST00000337841 ASCL1P50553 236 aa10.58□□□□□ -0.72
SPTLC1-202ENST00000337841 LSM11P83369 360 aaKnown RBP eCLIP10.58□□□□□ -0.72
SPTLC1-202ENST00000337841 LAPTM4AQ15012 233 aa10.58□□□□□ -0.72
SPTLC1-202ENST00000337841 MICAQ29983 383 aa10.58□□□□□ -0.72
SPTLC1-202ENST00000337841 ZBED5Q49AG3 693 aa10.58□□□□□ -0.72
SPTLC1-202ENST00000337841 VWA1Q6PCB0 445 aa10.58□□□□□ -0.72
SPTLC1-202ENST00000337841 BEND4Q6ZU67 534 aa10.58□□□□□ -0.72
SPTLC1-202ENST00000337841 ZER1Q7Z7L7 766 aa10.58□□□□□ -0.72
SPTLC1-202ENST00000337841 EPHX4Q8IUS5 362 aa10.58□□□□□ -0.72
SPTLC1-202ENST00000337841 ZIC4Q8N9L1 334 aa10.58□□□□□ -0.72
SPTLC1-202ENST00000337841 ZNF610Q8N9Z0 462 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms