RNA–Protein interactions for RNA: ENST00000336873.9

HPS4-201, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HPS4, Length 3,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-201ENST00000336873 OR52B4Q8NGK2 314 aa7.57□□□□□ -1.2
HPS4-201ENST00000336873 OR51Q1Q8NH59 317 aa7.57□□□□□ -1.2
HPS4-201ENST00000336873 SENP5Q96HI0 755 aaPredicted RBP7.57□□□□□ -1.2
HPS4-201ENST00000336873 BMFQ96LC9 184 aa7.57□□□□□ -1.2
HPS4-201ENST00000336873 POLHQ9Y253 713 aa7.57□□□□□ -1.2
HPS4-201ENST00000336873 ZBTB32Q9Y2Y4 487 aaPredicted RBP7.57□□□□□ -1.2
HPS4-201ENST00000336873 A0A087WV48 116 aa7.56□□□□□ -1.2
HPS4-201ENST00000336873 A0A0A6YYJ9 748 aa7.56□□□□□ -1.2
HPS4-201ENST00000336873 A0A1B0GV50 99 aa7.56□□□□□ -1.2
HPS4-201ENST00000336873 FITM1A5D6W6 292 aa7.56□□□□□ -1.2
HPS4-201ENST00000336873 STMND1H3BQB6 276 aa7.56□□□□□ -1.2
HPS4-201ENST00000336873 SLC33A1O00400 549 aaPredicted RBP7.56□□□□□ -1.2
HPS4-201ENST00000336873 RECKO95980 971 aa7.56□□□□□ -1.2
HPS4-201ENST00000336873 TCRBP04435 133 aa7.56□□□□□ -1.2
HPS4-201ENST00000336873 CFIP05156 583 aa7.56□□□□□ -1.2
HPS4-201ENST00000336873 GLI4P10075 376 aa7.56□□□□□ -1.2
HPS4-201ENST00000336873 TACR3P29371 465 aa7.56□□□□□ -1.2
HPS4-201ENST00000336873 ERP29P30040 261 aaKnown RBP7.56□□□□□ -1.2
HPS4-201ENST00000336873 LCN1P31025 176 aa7.56□□□□□ -1.2
HPS4-201ENST00000336873 CDK10Q15131 360 aa7.56□□□□□ -1.2
HPS4-201ENST00000336873 GLYR1Q49A26 553 aaPredicted RBP7.56□□□□□ -1.2
HPS4-201ENST00000336873 LIPNQ5VXI9 398 aa7.56□□□□□ -1.2
HPS4-201ENST00000336873 ZNF770Q6IQ21 691 aaPredicted RBP7.56□□□□□ -1.2
HPS4-201ENST00000336873 PM20D2Q8IYS1 436 aa7.56□□□□□ -1.2
HPS4-201ENST00000336873 OR5AK2Q8NH90 309 aa7.56□□□□□ -1.2
HPS4-201ENST00000336873 C16orf52Q8NHV5 167 aa7.56□□□□□ -1.2
HPS4-201ENST00000336873 FCAMRQ8WWV6 532 aa7.56□□□□□ -1.2
HPS4-201ENST00000336873 MOAP1Q96BY2 351 aa7.56□□□□□ -1.2
HPS4-201ENST00000336873 PDE7BQ9NP56 450 aa7.56□□□□□ -1.2
HPS4-201ENST00000336873 OR2S2Q9NQN1 319 aa7.56□□□□□ -1.2
HPS4-201ENST00000336873 CGGBP1Q9UFW8 167 aaPredicted RBP7.56□□□□□ -1.2
HPS4-201ENST00000336873 NOP16Q9Y3C1 178 aaKnown RBP7.56□□□□□ -1.2
HPS4-201ENST00000336873 HELZP42694 1942 aaKnown RBP7.56□□□□□ -1.2
HPS4-201ENST00000336873 PHF3Q92576 2039 aaKnown RBP7.56□□□□□ -1.2
HPS4-201ENST00000336873 MED13LQ71F56 2210 aa7.56□□□□□ -1.2
HPS4-201ENST00000336873 DIDO1Q9BTC0 2240 aaKnown RBP7.56□□□□□ -1.2
HPS4-201ENST00000336873 C5orf51A6NDU8 294 aa7.56□□□□□ -1.2
HPS4-201ENST00000336873 NPIPB8E9PQR5 432 aa7.56□□□□□ -1.2
HPS4-201ENST00000336873 RGS11O94810 467 aa7.56□□□□□ -1.2
HPS4-201ENST00000336873 IFNA6P05013 189 aa7.56□□□□□ -1.2
HPS4-201ENST00000336873 FREM3P0C091 2139 aa7.56□□□□□ -1.2
HPS4-201ENST00000336873 CXCL3P19876 107 aa7.56□□□□□ -1.2
HPS4-201ENST00000336873 LSSP48449 732 aa7.56□□□□□ -1.2
HPS4-201ENST00000336873 RRAS2P62070 204 aaPredicted RBP7.56□□□□□ -1.2
HPS4-201ENST00000336873 CDK5Q00535 292 aa7.56□□□□□ -1.2
HPS4-201ENST00000336873 PHF19Q5T6S3 580 aa7.56□□□□□ -1.2
HPS4-201ENST00000336873 ELP2Q6IA86 826 aa7.56□□□□□ -1.2
HPS4-201ENST00000336873 NIPAL3Q6P499 406 aa7.56□□□□□ -1.2
HPS4-201ENST00000336873 GPALPP1Q8IXQ4 340 aa7.56□□□□□ -1.2
HPS4-201ENST00000336873 ZPLD1Q8TCW7 415 aa7.56□□□□□ -1.2
HPS4-201ENST00000336873 VWCEQ96DN2 955 aa7.56□□□□□ -1.2
HPS4-201ENST00000336873 ST6GAL2Q96JF0 529 aa7.56□□□□□ -1.2
HPS4-201ENST00000336873 DDOQ99489 341 aa7.56□□□□□ -1.2
HPS4-201ENST00000336873 SDHCQ99643 169 aaPredicted RBP7.56□□□□□ -1.2
HPS4-201ENST00000336873 ATF6BQ99941 703 aa7.56□□□□□ -1.2
HPS4-201ENST00000336873 TEX101Q9BY14 249 aa7.56□□□□□ -1.2
HPS4-201ENST00000336873 OR10A5Q9H207 317 aa7.56□□□□□ -1.2
HPS4-201ENST00000336873 SLC25A19Q9HC21 320 aa7.56□□□□□ -1.2
HPS4-201ENST00000336873 ANKRD10Q9NXR5 420 aa7.56□□□□□ -1.2
HPS4-201ENST00000336873 FBXL2Q9UKC9 423 aa7.56□□□□□ -1.2
HPS4-201ENST00000336873 SLC22A13Q9Y226 551 aa7.56□□□□□ -1.2
HPS4-201ENST00000336873 A0A1W2PPL8 197 aa7.56□□□□□ -1.2
HPS4-201ENST00000336873 TSPAN11A1L157 253 aa7.56□□□□□ -1.2
HPS4-201ENST00000336873 RBBP9O75884 186 aa7.56□□□□□ -1.2
HPS4-201ENST00000336873 EPPINO95925 133 aa7.56□□□□□ -1.2
HPS4-201ENST00000336873 TFP02787 698 aa7.56□□□□□ -1.2
HPS4-201ENST00000336873 SEMG1P04279 462 aa7.56□□□□□ -1.2
HPS4-201ENST00000336873 DHPSP49366 369 aaPredicted RBP7.56□□□□□ -1.2
HPS4-201ENST00000336873 BLKP51451 505 aa7.56□□□□□ -1.2
HPS4-201ENST00000336873 KIR2DS3Q14952 304 aa7.56□□□□□ -1.2
HPS4-201ENST00000336873 ARHGAP11AQ6P4F7 1023 aa7.56□□□□□ -1.2
HPS4-201ENST00000336873 OR52I2Q8NH67 350 aa7.56□□□□□ -1.2
HPS4-201ENST00000336873 TMEM41AQ96HV5 264 aa7.56□□□□□ -1.2
HPS4-201ENST00000336873 LINC00615Q96LM1 132 aaPredicted RBP7.56□□□□□ -1.2
HPS4-201ENST00000336873 FOLH1BQ9HBA9 442 aa7.56□□□□□ -1.2
HPS4-201ENST00000336873 VSX1Q9NZR4 365 aaPredicted RBP7.56□□□□□ -1.2
HPS4-201ENST00000336873 GSKIPQ9P0R6 139 aa7.56□□□□□ -1.2
HPS4-201ENST00000336873 CKLFQ9UBR5 152 aa7.56□□□□□ -1.2
HPS4-201ENST00000336873 SLCO1B1Q9Y6L6 691 aa7.56□□□□□ -1.2
HPS4-201ENST00000336873 SHANK1Q9Y566 2161 aa7.55□□□□□ -1.2
HPS4-201ENST00000336873 A0A0J9YY10 115 aa7.55□□□□□ -1.2
HPS4-201ENST00000336873 TRDV1A0A1B0GX56 115 aa7.55□□□□□ -1.2
HPS4-201ENST00000336873 CD2P06729 351 aa7.55□□□□□ -1.2
HPS4-201ENST00000336873 PGAM2P15259 253 aa7.55□□□□□ -1.2
HPS4-201ENST00000336873 ATF1P18846 271 aa7.55□□□□□ -1.2
HPS4-201ENST00000336873 PSMA3P25788 255 aa7.55□□□□□ -1.2
HPS4-201ENST00000336873 DCTDP32321 178 aa7.55□□□□□ -1.2
HPS4-201ENST00000336873 SNU13P55769 128 aaKnown RBP7.55□□□□□ -1.2
HPS4-201ENST00000336873 KIAA1024LP59773 190 aa7.55□□□□□ -1.2
HPS4-201ENST00000336873 TDGQ13569 410 aa7.55□□□□□ -1.2
HPS4-201ENST00000336873 SF3A2Q15428 464 aaKnown RBP7.55□□□□□ -1.2
HPS4-201ENST00000336873 PRAMEF20Q5VT98 475 aa7.55□□□□□ -1.2
HPS4-201ENST00000336873 SLC6A19Q695T7 634 aa7.55□□□□□ -1.2
HPS4-201ENST00000336873 FAM122CQ6P4D5 195 aa7.55□□□□□ -1.2
HPS4-201ENST00000336873 ULK3Q6PHR2 472 aa7.55□□□□□ -1.2
HPS4-201ENST00000336873 BTN2A1Q7KYR7 527 aa7.55□□□□□ -1.2
HPS4-201ENST00000336873 RTL10Q7L3V2 364 aa7.55□□□□□ -1.2
HPS4-201ENST00000336873 PAQR7Q86WK9 346 aa7.55□□□□□ -1.2
HPS4-201ENST00000336873 ZNF321PQ8N8H1 164 aa7.55□□□□□ -1.2
HPS4-201ENST00000336873 ACBD4Q8NC06 268 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms