RNA–Protein interactions for RNA: ENST00000334389.5

LINC00643-201, long intergenic non-protein coding RNA 643, humanhuman

TSL 2 BASIC

Gene LINC00643, Length 3,247 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00643-201ENST00000334389 AMZ1Q400G9 498 aa1.23□□□□□ -2.21
LINC00643-201ENST00000334389 SOHLH1Q5JUK2 328 aa1.23□□□□□ -2.21
LINC00643-201ENST00000334389 NXNQ6DKJ4 435 aa1.23□□□□□ -2.21
LINC00643-201ENST00000334389 DHRS7BQ6IAN0 325 aaPredicted RBP1.23□□□□□ -2.21
LINC00643-201ENST00000334389 PIWIL4Q7Z3Z4 852 aaKnown RBP1.23□□□□□ -2.21
LINC00643-201ENST00000334389 C1orf87Q8N0U7 546 aa1.23□□□□□ -2.21
LINC00643-201ENST00000334389 Q8N1Y9 231 aa1.23□□□□□ -2.21
LINC00643-201ENST00000334389 CYB561A3Q8NBI2 242 aa1.23□□□□□ -2.21
LINC00643-201ENST00000334389 CALML6Q8TD86 181 aa1.23□□□□□ -2.21
LINC00643-201ENST00000334389 LPGAT1Q92604 370 aa1.23□□□□□ -2.21
LINC00643-201ENST00000334389 SCAMP4Q969E2 229 aa1.23□□□□□ -2.21
LINC00643-201ENST00000334389 S100PBPQ96BU1 408 aa1.23□□□□□ -2.21
LINC00643-201ENST00000334389 CMTM7Q96FZ5 175 aa1.23□□□□□ -2.21
LINC00643-201ENST00000334389 UBE2E2Q96LR5 201 aa1.23□□□□□ -2.21
LINC00643-201ENST00000334389 CGREF1Q99674 301 aa1.23□□□□□ -2.21
LINC00643-201ENST00000334389 OR2J1Q9GZK6 312 aa1.23□□□□□ -2.21
LINC00643-201ENST00000334389 PRSS22Q9GZN4 317 aa1.23□□□□□ -2.21
LINC00643-201ENST00000334389 OR2AG1Q9H205 316 aa1.23□□□□□ -2.21
LINC00643-201ENST00000334389 GOLPH3LQ9H4A5 285 aa1.23□□□□□ -2.21
LINC00643-201ENST00000334389 CXorf21Q9HAI6 301 aa1.23□□□□□ -2.21
LINC00643-201ENST00000334389 SLCO1B3Q9NPD5 702 aa1.23□□□□□ -2.21
LINC00643-201ENST00000334389 NECTIN3Q9NQS3 549 aa1.23□□□□□ -2.21
LINC00643-201ENST00000334389 PRTFDC1Q9NRG1 225 aa1.23□□□□□ -2.21
LINC00643-201ENST00000334389 TOMM22Q9NS69 142 aa1.23□□□□□ -2.21
LINC00643-201ENST00000334389 OXSMQ9NWU1 459 aa1.23□□□□□ -2.21
LINC00643-201ENST00000334389 SOHLH2Q9NX45 425 aa1.23□□□□□ -2.21
LINC00643-201ENST00000334389 TRPC4Q9UBN4 977 aa1.23□□□□□ -2.21
LINC00643-201ENST00000334389 CHRNA9Q9UGM1 479 aa1.23□□□□□ -2.21
LINC00643-201ENST00000334389 SNX5Q9Y5X3 404 aa1.23□□□□□ -2.21
LINC00643-201ENST00000334389 CDH10Q9Y6N8 788 aa1.23□□□□□ -2.21
LINC00643-201ENST00000334389 DSTQ03001 7570 aaKnown RBP1.22□□□□□ -2.21
LINC00643-201ENST00000334389 IGHV2OR16-5A0A0B4J2B6 119 aa1.22□□□□□ -2.21
LINC00643-201ENST00000334389 C1orf226A1L170 272 aa1.22□□□□□ -2.21
LINC00643-201ENST00000334389 LINC01548A6NM66 108 aa1.22□□□□□ -2.21
LINC00643-201ENST00000334389 FAM220BPB1ANY3 271 aa1.22□□□□□ -2.21
LINC00643-201ENST00000334389 IMPA2O14732 288 aa1.22□□□□□ -2.21
LINC00643-201ENST00000334389 CHST10O43529 356 aa1.22□□□□□ -2.21
LINC00643-201ENST00000334389 PROSCO94903 275 aa1.22□□□□□ -2.21
LINC00643-201ENST00000334389 TGFB1P01137 390 aa1.22□□□□□ -2.21
LINC00643-201ENST00000334389 KRTAP1-4P0C5Y4 121 aa1.22□□□□□ -2.21
LINC00643-201ENST00000334389 CCL3P10147 92 aa1.22□□□□□ -2.21
LINC00643-201ENST00000334389 THRBP10828 461 aa1.22□□□□□ -2.21
LINC00643-201ENST00000334389 TNFRSF1AP19438 455 aa1.22□□□□□ -2.21
LINC00643-201ENST00000334389 CSNK2A2P19784 350 aaPredicted RBP1.22□□□□□ -2.21
LINC00643-201ENST00000334389 MAKP20794 623 aa1.22□□□□□ -2.21
LINC00643-201ENST00000334389 ACKR3P25106 362 aa1.22□□□□□ -2.21
LINC00643-201ENST00000334389 ARRB2P32121 409 aa1.22□□□□□ -2.21
LINC00643-201ENST00000334389 CTNNA1P35221 906 aaKnown RBP1.22□□□□□ -2.21
LINC00643-201ENST00000334389 RPA3P35244 121 aaPredicted RBP1.22□□□□□ -2.21
LINC00643-201ENST00000334389 GGT2P36268 569 aa1.22□□□□□ -2.21
LINC00643-201ENST00000334389 EMDP50402 254 aa1.22□□□□□ -2.21
LINC00643-201ENST00000334389 ANXA11P50995 505 aaKnown RBP1.22□□□□□ -2.21
LINC00643-201ENST00000334389 RORCP51449 518 aa1.22□□□□□ -2.21
LINC00643-201ENST00000334389 NDUFA8P51970 172 aa1.22□□□□□ -2.21
LINC00643-201ENST00000334389 MAPK12P53778 367 aa1.22□□□□□ -2.21
LINC00643-201ENST00000334389 SLC18A1P54219 525 aa1.22□□□□□ -2.21
LINC00643-201ENST00000334389 TPM4P67936 248 aa1.22□□□□□ -2.21
LINC00643-201ENST00000334389 FMO1Q01740 532 aa1.22□□□□□ -2.21
LINC00643-201ENST00000334389 ZNF155Q12901 538 aaPredicted RBP1.22□□□□□ -2.21
LINC00643-201ENST00000334389 TRAF3Q13114 568 aa1.22□□□□□ -2.21
LINC00643-201ENST00000334389 RIPK1Q13546 671 aa1.22□□□□□ -2.21
LINC00643-201ENST00000334389 TP53BP2Q13625 1128 aa1.22□□□□□ -2.21
LINC00643-201ENST00000334389 SF1Q15637 639 aaKnown RBP1.22□□□□□ -2.21
LINC00643-201ENST00000334389 DCAF12L2Q5VW00 463 aa1.22□□□□□ -2.21
LINC00643-201ENST00000334389 IL23RQ5VWK5 629 aa1.22□□□□□ -2.21
LINC00643-201ENST00000334389 PGBD2Q6P3X8 592 aa1.22□□□□□ -2.21
LINC00643-201ENST00000334389 TRIM40Q6P9F5 258 aa1.22□□□□□ -2.21
LINC00643-201ENST00000334389 DHRS4L2Q6PKH6 230 aa1.22□□□□□ -2.21
LINC00643-201ENST00000334389 TMEM220Q6QAJ8 160 aa1.22□□□□□ -2.21
LINC00643-201ENST00000334389 PAQR6Q6TCH4 344 aa1.22□□□□□ -2.21
LINC00643-201ENST00000334389 ZNF550Q7Z398 422 aa1.22□□□□□ -2.21
LINC00643-201ENST00000334389 NKAIN4Q8IVV8 208 aa1.22□□□□□ -2.21
LINC00643-201ENST00000334389 ZBED8Q8IZ13 594 aa1.22□□□□□ -2.21
LINC00643-201ENST00000334389 RCOR2Q8IZ40 523 aa1.22□□□□□ -2.21
LINC00643-201ENST00000334389 SYCE1Q8N0S2 351 aa1.22□□□□□ -2.21
LINC00643-201ENST00000334389 TMEM123Q8N131 208 aa1.22□□□□□ -2.21
LINC00643-201ENST00000334389 C12orf29Q8N999 325 aa1.22□□□□□ -2.21
LINC00643-201ENST00000334389 SMYD1Q8NB12 490 aa1.22□□□□□ -2.21
LINC00643-201ENST00000334389 SPC24Q8NBT2 197 aa1.22□□□□□ -2.21
LINC00643-201ENST00000334389 KBTBD8Q8NFY9 601 aa1.22□□□□□ -2.21
LINC00643-201ENST00000334389 RASSF8Q8NHQ8 419 aa1.22□□□□□ -2.21
LINC00643-201ENST00000334389 MFSD8Q8NHS3 518 aa1.22□□□□□ -2.21
LINC00643-201ENST00000334389 UBALD1Q8TB05 177 aa1.22□□□□□ -2.21
LINC00643-201ENST00000334389 ZHX1-C8orf76Q96EF9 292 aa1.22□□□□□ -2.21
LINC00643-201ENST00000334389 PHF21BQ96EK2 531 aa1.22□□□□□ -2.21
LINC00643-201ENST00000334389 DCUN1D1Q96GG9 259 aa1.22□□□□□ -2.21
LINC00643-201ENST00000334389 RCHY1Q96PM5 261 aa1.22□□□□□ -2.21
LINC00643-201ENST00000334389 AGPAT1Q99943 283 aa1.22□□□□□ -2.21
LINC00643-201ENST00000334389 TMEM43Q9BTV4 400 aa1.22□□□□□ -2.21
LINC00643-201ENST00000334389 MED18Q9BUE0 208 aa1.22□□□□□ -2.21
LINC00643-201ENST00000334389 PLEKHA2Q9HB19 425 aa1.22□□□□□ -2.21
LINC00643-201ENST00000334389 ZNF446Q9NWS9 450 aa1.22□□□□□ -2.21
LINC00643-201ENST00000334389 HIF1ANQ9NWT6 349 aa1.22□□□□□ -2.21
LINC00643-201ENST00000334389 FAM8A1Q9UBU6 413 aa1.22□□□□□ -2.21
LINC00643-201ENST00000334389 NDUFAF1Q9Y375 327 aa1.22□□□□□ -2.21
LINC00643-201ENST00000334389 JRKLQ9Y4A0 524 aa1.22□□□□□ -2.21
LINC00643-201ENST00000334389 PCDHA9Q9Y5H5 950 aa1.22□□□□□ -2.21
LINC00643-201ENST00000334389 ZNF816-ZNF321PA0A0X1KG74 233 aa1.22□□□□□ -2.21
LINC00643-201ENST00000334389 E7ESA3 106 aa1.22□□□□□ -2.21
LINC00643-201ENST00000334389 H0Y980 276 aa1.22□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms