RNA–Protein interactions for RNA: ENST00000328300.10

COL4A5-201, Transcript of collagen type IV alpha 5 chain, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene COL4A5, Length 6,483 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-201ENST00000328300 IFNA1P01562 189 aa10.53□□□□□ -0.72
COL4A5-201ENST00000328300 AMY2AP04746 511 aa10.53□□□□□ -0.72
COL4A5-201ENST00000328300 NAGAP17050 411 aa10.53□□□□□ -0.72
COL4A5-201ENST00000328300 SLC2A5P22732 501 aa10.53□□□□□ -0.72
COL4A5-201ENST00000328300 EFNA3P52797 238 aa10.53□□□□□ -0.72
COL4A5-201ENST00000328300 SIRPAP78324 504 aa10.53□□□□□ -0.72
COL4A5-201ENST00000328300 S100A12P80511 92 aa10.53□□□□□ -0.72
COL4A5-201ENST00000328300 RELAQ04206 551 aa10.53□□□□□ -0.72
COL4A5-201ENST00000328300 CCBE1Q6UXH8 406 aaPredicted RBP10.53□□□□□ -0.72
COL4A5-201ENST00000328300 SIMC1Q8NDZ2 872 aa10.53□□□□□ -0.72
COL4A5-201ENST00000328300 OR56B1Q8NGI3 324 aa10.53□□□□□ -0.72
COL4A5-201ENST00000328300 STT3BQ8TCJ2 826 aa10.53□□□□□ -0.72
COL4A5-201ENST00000328300 ZBTB8AQ96BR9 441 aa10.53□□□□□ -0.72
COL4A5-201ENST00000328300 TNFRSF13CQ96RJ3 184 aa10.53□□□□□ -0.72
COL4A5-201ENST00000328300 GABARAPL3Q9BY60 117 aa10.53□□□□□ -0.72
COL4A5-201ENST00000328300 IL20RAQ9UHF4 553 aa10.53□□□□□ -0.72
COL4A5-201ENST00000328300 NDRG4Q9ULP0 352 aaKnown RBP10.53□□□□□ -0.72
COL4A5-201ENST00000328300 COL4A1P02462 1669 aa10.53□□□□□ -0.72
COL4A5-201ENST00000328300 PMS2P1A4D2B8 440 aa10.53□□□□□ -0.72
COL4A5-201ENST00000328300 TMEM221A6NGB7 291 aa10.53□□□□□ -0.72
COL4A5-201ENST00000328300 ZNF195O14628 629 aa10.53□□□□□ -0.72
COL4A5-201ENST00000328300 FASLGP48023 281 aa10.53□□□□□ -0.72
COL4A5-201ENST00000328300 TAS2R46P59540 309 aa10.53□□□□□ -0.72
COL4A5-201ENST00000328300 RPL27P61353 136 aaKnown RBP10.53□□□□□ -0.72
COL4A5-201ENST00000328300 RPS23P62266 143 aaKnown RBP10.53□□□□□ -0.72
COL4A5-201ENST00000328300 DUSP5Q16690 384 aa10.53□□□□□ -0.72
COL4A5-201ENST00000328300 SPRED3Q2MJR0 410 aa10.53□□□□□ -0.72
COL4A5-201ENST00000328300 PHB2Q99623 299 aa10.53□□□□□ -0.72
COL4A5-201ENST00000328300 SLC6A7Q99884 636 aa10.53□□□□□ -0.72
COL4A5-201ENST00000328300 UCK1Q9HA47 277 aa10.53□□□□□ -0.72
COL4A5-201ENST00000328300 NRIP3Q9NQ35 241 aa10.53□□□□□ -0.72
COL4A5-201ENST00000328300 FAIMQ9NVQ4 179 aa10.53□□□□□ -0.72
COL4A5-201ENST00000328300 MYOTQ9UBF9 498 aa10.53□□□□□ -0.72
COL4A5-201ENST00000328300 SBF2Q86WG5 1849 aa10.53□□□□□ -0.72
COL4A5-201ENST00000328300 D6RAR5 112 aa10.53□□□□□ -0.72
COL4A5-201ENST00000328300 EMP3P54852 163 aa10.53□□□□□ -0.72
COL4A5-201ENST00000328300 B4GALNT1Q00973 533 aa10.53□□□□□ -0.72
COL4A5-201ENST00000328300 ZNF684Q5T5D7 378 aa10.53□□□□□ -0.72
COL4A5-201ENST00000328300 HES5Q5TA89 166 aa10.53□□□□□ -0.72
COL4A5-201ENST00000328300 FCRLBQ6BAA4 426 aa10.53□□□□□ -0.72
COL4A5-201ENST00000328300 NIPAL3Q6P499 406 aa10.53□□□□□ -0.72
COL4A5-201ENST00000328300 WDR53Q7Z5U6 358 aaPredicted RBP10.53□□□□□ -0.72
COL4A5-201ENST00000328300 SLC25A19Q9HC21 320 aa10.53□□□□□ -0.72
COL4A5-201ENST00000328300 TAS2R3Q9NYW6 316 aa10.53□□□□□ -0.72
COL4A5-201ENST00000328300 B3GAT1Q9P2W7 334 aa10.53□□□□□ -0.72
COL4A5-201ENST00000328300 TRAPPC2LH3BP13 241 aa10.52□□□□□ -0.72
COL4A5-201ENST00000328300 J3KTA2 159 aa10.52□□□□□ -0.72
COL4A5-201ENST00000328300 DPM1O60762 260 aa10.52□□□□□ -0.72
COL4A5-201ENST00000328300 CD34P28906 385 aa10.52□□□□□ -0.72
COL4A5-201ENST00000328300 GPR85P60893 370 aa10.52□□□□□ -0.72
COL4A5-201ENST00000328300 GAB1Q13480 694 aa10.52□□□□□ -0.72
COL4A5-201ENST00000328300 RBM39Q14498 530 aaKnown RBP10.52□□□□□ -0.72
COL4A5-201ENST00000328300 PM20D2Q8IYS1 436 aa10.52□□□□□ -0.72
COL4A5-201ENST00000328300 OR6T1Q8NGN1 323 aa10.52□□□□□ -0.72
COL4A5-201ENST00000328300 RHOXF1Q8NHV9 184 aa10.52□□□□□ -0.72
COL4A5-201ENST00000328300 GAB3Q8WWW8 586 aa10.52□□□□□ -0.72
COL4A5-201ENST00000328300 GCDHQ92947 438 aaPredicted RBP10.52□□□□□ -0.72
COL4A5-201ENST00000328300 TCEAL3Q969E4 200 aa10.52□□□□□ -0.72
COL4A5-201ENST00000328300 SLCO5A1Q9H2Y9 848 aa10.52□□□□□ -0.72
COL4A5-201ENST00000328300 CDCP1Q9H5V8 836 aa10.52□□□□□ -0.72
COL4A5-201ENST00000328300 PLCXD1Q9NUJ7 323 aa10.52□□□□□ -0.72
COL4A5-201ENST00000328300 TMPRSS11DO60235 418 aa10.52□□□□□ -0.72
COL4A5-201ENST00000328300 FGF17O60258 216 aa10.52□□□□□ -0.72
COL4A5-201ENST00000328300 UPK1BO75841 260 aa10.52□□□□□ -0.72
COL4A5-201ENST00000328300 TAS2R19P59542 299 aa10.52□□□□□ -0.72
COL4A5-201ENST00000328300 BDH1Q02338 343 aa10.52□□□□□ -0.72
COL4A5-201ENST00000328300 CCDC58Q4VC31 144 aa10.52□□□□□ -0.72
COL4A5-201ENST00000328300 OR51L1Q8NGJ5 315 aa10.52□□□□□ -0.72
COL4A5-201ENST00000328300 RRNAD1Q96FB5 475 aaKnown RBP10.52□□□□□ -0.72
COL4A5-201ENST00000328300 SLC25A44Q96H78 314 aaPredicted RBP10.52□□□□□ -0.72
COL4A5-201ENST00000328300 COX14Q96I36 57 aa10.52□□□□□ -0.72
COL4A5-201ENST00000328300 CSF3RQ99062 836 aa10.52□□□□□ -0.72
COL4A5-201ENST00000328300 EGLN3Q9H6Z9 239 aa10.52□□□□□ -0.72
COL4A5-201ENST00000328300 APMAPQ9HDC9 416 aa10.52□□□□□ -0.72
COL4A5-201ENST00000328300 CHRNA9Q9UGM1 479 aa10.52□□□□□ -0.72
COL4A5-201ENST00000328300 CACNG2Q9Y698 323 aa10.52□□□□□ -0.72
COL4A5-201ENST00000328300 A0A1W2PPK0 400 aa10.52□□□□□ -0.73
COL4A5-201ENST00000328300 RNF212BA8MTL3 300 aa10.52□□□□□ -0.73
COL4A5-201ENST00000328300 ZNF593O00488 134 aaPredicted RBP10.52□□□□□ -0.73
COL4A5-201ENST00000328300 SURF4O15260 269 aa10.52□□□□□ -0.73
COL4A5-201ENST00000328300 ZNF780AO75290 641 aaPredicted RBP10.52□□□□□ -0.73
COL4A5-201ENST00000328300 MPIG6BO95866 241 aa10.52□□□□□ -0.73
COL4A5-201ENST00000328300 PRR35P0CG20 571 aa10.52□□□□□ -0.73
COL4A5-201ENST00000328300 PIGAP37287 484 aa10.52□□□□□ -0.73
COL4A5-201ENST00000328300 GJC3Q8NFK1 279 aa10.52□□□□□ -0.73
COL4A5-201ENST00000328300 STK35Q8TDR2 534 aa10.52□□□□□ -0.73
COL4A5-201ENST00000328300 MAFIPQ8WZ33 124 aa10.52□□□□□ -0.73
COL4A5-201ENST00000328300 SLC35A4Q96G79 324 aa10.52□□□□□ -0.73
COL4A5-201ENST00000328300 CHST11Q9NPF2 352 aa10.52□□□□□ -0.73
COL4A5-201ENST00000328300 PLEKHJ1Q9NW61 149 aa10.52□□□□□ -0.73
COL4A5-201ENST00000328300 TMEM129A0AVI4 362 aa10.52□□□□□ -0.73
COL4A5-201ENST00000328300 NARSO43776 548 aaKnown RBP10.52□□□□□ -0.73
COL4A5-201ENST00000328300 AQP2P41181 271 aa10.52□□□□□ -0.73
COL4A5-201ENST00000328300 CLVS2Q5SYC1 327 aa10.52□□□□□ -0.73
COL4A5-201ENST00000328300 PLCXD3Q63HM9 321 aa10.52□□□□□ -0.73
COL4A5-201ENST00000328300 CNIH2Q6PI25 160 aa10.52□□□□□ -0.73
COL4A5-201ENST00000328300 CCDC74BQ96LY2 380 aa10.52□□□□□ -0.73
COL4A5-201ENST00000328300 TVP23AA6NH52 213 aa10.52□□□□□ -0.73
COL4A5-201ENST00000328300 SMAD9O15198 467 aaKnown RBP10.52□□□□□ -0.73
COL4A5-201ENST00000328300 KCNK2O95069 426 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms