RNA–Protein interactions for RNA: ENST00000327304.9

EXOSC3-201, Transcript of exosome component 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EXOSC3, Length 1,806 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-201ENST00000327304 MEOX1P50221 254 aa16.93■□□□□ 0.3
EXOSC3-201ENST00000327304 CDH11P55287 796 aa16.93■□□□□ 0.3
EXOSC3-201ENST00000327304 FOXK2Q01167 660 aa16.93■□□□□ 0.3
EXOSC3-201ENST00000327304 FOXF1Q12946 379 aa16.93■□□□□ 0.3
EXOSC3-201ENST00000327304 SLC46A3Q7Z3Q1 461 aa16.93■□□□□ 0.3
EXOSC3-201ENST00000327304 ZADH2Q8N4Q0 377 aa16.93■□□□□ 0.3
EXOSC3-201ENST00000327304 ST8SIA1Q92185 356 aa16.93■□□□□ 0.3
EXOSC3-201ENST00000327304 LGALS12Q96DT0 336 aa16.93■□□□□ 0.3
EXOSC3-201ENST00000327304 RNFT2Q96EX2 444 aa16.93■□□□□ 0.3
EXOSC3-201ENST00000327304 DCUN1D5Q9BTE7 237 aa16.93■□□□□ 0.3
EXOSC3-201ENST00000327304 MND1Q9BWT6 205 aa16.93■□□□□ 0.3
EXOSC3-201ENST00000327304 TAS2R16Q9NYV7 291 aa16.93■□□□□ 0.3
EXOSC3-201ENST00000327304 H2AFY2Q9P0M6 372 aaPredicted RBP16.93■□□□□ 0.3
EXOSC3-201ENST00000327304 BOKQ9UMX3 212 aaPredicted RBP16.93■□□□□ 0.3
EXOSC3-201ENST00000327304 ZNF337Q9Y3M9 751 aa16.93■□□□□ 0.3
EXOSC3-201ENST00000327304 OR7A10O76100 309 aa16.93■□□□□ 0.3
EXOSC3-201ENST00000327304 NDUFB2O95178 105 aa16.93■□□□□ 0.3
EXOSC3-201ENST00000327304 ITGB2P05107 769 aa16.93■□□□□ 0.3
EXOSC3-201ENST00000327304 DPP4P27487 766 aa16.93■□□□□ 0.3
EXOSC3-201ENST00000327304 HTR1FP30939 366 aa16.93■□□□□ 0.3
EXOSC3-201ENST00000327304 FOXK1P85037 733 aa16.93■□□□□ 0.3
EXOSC3-201ENST00000327304 ARMCX4Q5H9R4 360 aa16.93■□□□□ 0.3
EXOSC3-201ENST00000327304 POMZP3Q6PJE2 187 aa16.93■□□□□ 0.3
EXOSC3-201ENST00000327304 CXXC5Q7LFL8 322 aaKnown RBP16.93■□□□□ 0.3
EXOSC3-201ENST00000327304 NANOGP1Q8N7R0 232 aa16.93■□□□□ 0.3
EXOSC3-201ENST00000327304 TMEM178AQ8NBL3 297 aa16.93■□□□□ 0.3
EXOSC3-201ENST00000327304 TM9SF4Q92544 642 aa16.93■□□□□ 0.3
EXOSC3-201ENST00000327304 ABHD17AQ96GS6 310 aa16.93■□□□□ 0.3
EXOSC3-201ENST00000327304 HINT3Q9NQE9 182 aaKnown RBP16.93■□□□□ 0.3
EXOSC3-201ENST00000327304 OSGIN1Q9UJX0 560 aa16.93■□□□□ 0.3
EXOSC3-201ENST00000327304 LSM2Q9Y333 95 aaKnown RBP16.93■□□□□ 0.3
EXOSC3-201ENST00000327304 ACACBO00763 2458 aa16.92■□□□□ 0.3
EXOSC3-201ENST00000327304 TNFSF12-TNFSF13A0A0A6YY99 330 aa16.92■□□□□ 0.3
EXOSC3-201ENST00000327304 TRAV17A0A0B4J275 112 aa16.92■□□□□ 0.3
EXOSC3-201ENST00000327304 CBR3O75828 277 aa16.92■□□□□ 0.3
EXOSC3-201ENST00000327304 SLC2A10O95528 541 aa16.92■□□□□ 0.3
EXOSC3-201ENST00000327304 PEPDP12955 493 aa16.92■□□□□ 0.3
EXOSC3-201ENST00000327304 ROR2Q01974 943 aaKnown RBP16.92■□□□□ 0.3
EXOSC3-201ENST00000327304 MED22Q15528 200 aa16.92■□□□□ 0.3
EXOSC3-201ENST00000327304 ARHGAP11AQ6P4F7 1023 aa16.92■□□□□ 0.3
EXOSC3-201ENST00000327304 GRINAQ7Z429 371 aa16.92■□□□□ 0.3
EXOSC3-201ENST00000327304 PNPLA5Q7Z6Z6 429 aaPredicted RBP16.92■□□□□ 0.3
EXOSC3-201ENST00000327304 POC1BQ8TC44 478 aa16.92■□□□□ 0.3
EXOSC3-201ENST00000327304 TMEM234Q8WY98 164 aa16.92■□□□□ 0.3
EXOSC3-201ENST00000327304 OR5M11Q96RB7 305 aa16.92■□□□□ 0.3
EXOSC3-201ENST00000327304 MGLLQ99685 303 aa16.92■□□□□ 0.3
EXOSC3-201ENST00000327304 DKKL1Q9UK85 242 aa16.92■□□□□ 0.3
EXOSC3-201ENST00000327304 PCDHGB6Q9Y5F9 930 aa16.92■□□□□ 0.3
EXOSC3-201ENST00000327304 NCKAP5O14513 1909 aa16.92■□□□□ 0.3
EXOSC3-201ENST00000327304 KLRC4-KLRK1H3BQV0 150 aa16.91■□□□□ 0.3
EXOSC3-201ENST00000327304 ETV2O00321 342 aaPredicted RBP16.91■□□□□ 0.3
EXOSC3-201ENST00000327304 BCL10O95999 233 aa16.91■□□□□ 0.3
EXOSC3-201ENST00000327304 HK1P19367 917 aa16.91■□□□□ 0.3
EXOSC3-201ENST00000327304 DLX5P56178 289 aa16.91■□□□□ 0.3
EXOSC3-201ENST00000327304 DSCR4P56555 118 aaPredicted RBP16.91■□□□□ 0.3
EXOSC3-201ENST00000327304 TMED1Q13445 227 aa16.91■□□□□ 0.3
EXOSC3-201ENST00000327304 AQP6Q13520 282 aa16.91■□□□□ 0.3
EXOSC3-201ENST00000327304 ANKDD1AQ495B1 522 aa16.91■□□□□ 0.3
EXOSC3-201ENST00000327304 CPOQ8IVL8 374 aa16.91■□□□□ 0.3
EXOSC3-201ENST00000327304 OR5M1Q8NGP8 315 aa16.91■□□□□ 0.3
EXOSC3-201ENST00000327304 TTTY12Q9BZ98 90 aa16.91■□□□□ 0.3
EXOSC3-201ENST00000327304 EXOGQ9Y2C4 368 aaKnown RBP16.91■□□□□ 0.3
EXOSC3-201ENST00000327304 EXOSC1Q9Y3B2 195 aaKnown RBP16.91■□□□□ 0.3
EXOSC3-201ENST00000327304 FAM47E-STBD1D6RA91 191 aa16.91■□□□□ 0.3
EXOSC3-201ENST00000327304 MYL12BO14950 172 aa16.91■□□□□ 0.3
EXOSC3-201ENST00000327304 ZIC3O60481 467 aa16.91■□□□□ 0.3
EXOSC3-201ENST00000327304 MYL12AP19105 171 aa16.91■□□□□ 0.3
EXOSC3-201ENST00000327304 RGS6P49758 472 aa16.91■□□□□ 0.3
EXOSC3-201ENST00000327304 POLR2HP52434 150 aaKnown RBP16.91■□□□□ 0.3
EXOSC3-201ENST00000327304 PRPS1P60891 318 aa16.91■□□□□ 0.3
EXOSC3-201ENST00000327304 RPS4XP62701 263 aaKnown RBP16.91■□□□□ 0.3
EXOSC3-201ENST00000327304 C1DQ13901 141 aaKnown RBP16.91■□□□□ 0.3
EXOSC3-201ENST00000327304 SPHARQ15513 63 aa16.91■□□□□ 0.3
EXOSC3-201ENST00000327304 SLC25A53Q5H9E4 307 aa16.91■□□□□ 0.3
EXOSC3-201ENST00000327304 ARMC4Q5T2S8 1044 aa16.91■□□□□ 0.3
EXOSC3-201ENST00000327304 ZNF703Q9H7S9 590 aaPredicted RBP16.91■□□□□ 0.3
EXOSC3-201ENST00000327304 CHCHD3Q9NX63 227 aaKnown RBP16.91■□□□□ 0.3
EXOSC3-201ENST00000327304 CLEC2DQ9UHP7 191 aa16.91■□□□□ 0.3
EXOSC3-201ENST00000327304 TP53TG5Q9Y2B4 290 aa16.91■□□□□ 0.3
EXOSC3-201ENST00000327304 TPRP12270 2363 aaKnown RBP16.9■□□□□ 0.3
EXOSC3-201ENST00000327304 A0A087WZY1 265 aa16.9■□□□□ 0.3
EXOSC3-201ENST00000327304 TMED7-TICAM2A0A0A6YYA0 188 aa16.9■□□□□ 0.3
EXOSC3-201ENST00000327304 RIIAD1A6NNX1 92 aa16.9■□□□□ 0.3
EXOSC3-201ENST00000327304 GLSO94925 669 aaPredicted RBP16.9■□□□□ 0.3
EXOSC3-201ENST00000327304 PPP1R3DO95685 299 aa16.9■□□□□ 0.3
EXOSC3-201ENST00000327304 IFNGP01579 166 aa16.9■□□□□ 0.3
EXOSC3-201ENST00000327304 ZNF182P17025 639 aaPredicted RBP16.9■□□□□ 0.3
EXOSC3-201ENST00000327304 GDF1P27539 372 aa16.9■□□□□ 0.3
EXOSC3-201ENST00000327304 PMP22Q01453 160 aa16.9■□□□□ 0.3
EXOSC3-201ENST00000327304 SPCS2Q15005 226 aa16.9■□□□□ 0.3
EXOSC3-201ENST00000327304 TOMM20Q15388 145 aa16.9■□□□□ 0.3
EXOSC3-201ENST00000327304 ZNF74Q16587 644 aa16.9■□□□□ 0.3
EXOSC3-201ENST00000327304 LINC00303Q3SY05 128 aa16.9■□□□□ 0.3
EXOSC3-201ENST00000327304 ZNF362Q5T0B9 420 aaPredicted RBP16.9■□□□□ 0.3
EXOSC3-201ENST00000327304 NIPAL3Q6P499 406 aa16.9■□□□□ 0.3
EXOSC3-201ENST00000327304 DPY19L2P2Q6ZN68 376 aa16.9■□□□□ 0.3
EXOSC3-201ENST00000327304 ADGRG3Q86Y34 549 aa16.9■□□□□ 0.3
EXOSC3-201ENST00000327304 RBMXL3Q8N7X1 1067 aaKnown RBP16.9■□□□□ 0.3
EXOSC3-201ENST00000327304 ZFP62Q8NB50 900 aaPredicted RBP16.9■□□□□ 0.3
EXOSC3-201ENST00000327304 MRGPRX4Q96LA9 322 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms