RNA–Protein interactions for RNA: ENST00000320081.9

CLIP4-201, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIP4, Length 4,293 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-201ENST00000320081 GNRHRP30968 328 aa15.2■□□□□ 0.02
CLIP4-201ENST00000320081 HOXC8P31273 242 aa15.2■□□□□ 0.02
CLIP4-201ENST00000320081 HERV-K104P61576 105 aa15.2■□□□□ 0.02
CLIP4-201ENST00000320081 P4HA3Q7Z4N8 544 aa15.2■□□□□ 0.02
CLIP4-201ENST00000320081 UEVLDQ8IX04 471 aa15.2■□□□□ 0.02
CLIP4-201ENST00000320081 KLHL21Q9UJP4 597 aa15.2■□□□□ 0.02
CLIP4-201ENST00000320081 EMC9Q9Y3B6 208 aa15.2■□□□□ 0.02
CLIP4-201ENST00000320081 FAM230AA0A1W2PPH8 454 aa15.2■□□□□ 0.02
CLIP4-201ENST00000320081 SYPP08247 313 aa15.2■□□□□ 0.02
CLIP4-201ENST00000320081 NID1P14543 1247 aa15.2■□□□□ 0.02
CLIP4-201ENST00000320081 FPR3P25089 353 aa15.2■□□□□ 0.02
CLIP4-201ENST00000320081 HTR1FP30939 366 aa15.2■□□□□ 0.02
CLIP4-201ENST00000320081 SLC26A5P58743 744 aa15.2■□□□□ 0.02
CLIP4-201ENST00000320081 PSPHP78330 225 aa15.2■□□□□ 0.02
CLIP4-201ENST00000320081 GBX1Q14549 363 aa15.2■□□□□ 0.02
CLIP4-201ENST00000320081 SFTPA2Q8IWL1 248 aa15.2■□□□□ 0.02
CLIP4-201ENST00000320081 HSD17B8Q92506 261 aa15.2■□□□□ 0.02
CLIP4-201ENST00000320081 TESQ9UGI8 421 aaKnown RBP15.2■□□□□ 0.02
CLIP4-201ENST00000320081 WDPCPO95876 746 aa15.2■□□□□ 0.02
CLIP4-201ENST00000320081 NPR2P20594 1047 aa15.2■□□□□ 0.02
CLIP4-201ENST00000320081 PER3P56645 1201 aa15.2■□□□□ 0.02
CLIP4-201ENST00000320081 PPP1CAP62136 330 aa15.2■□□□□ 0.02
CLIP4-201ENST00000320081 CSNK2A1P68400 391 aaPredicted RBP15.2■□□□□ 0.02
CLIP4-201ENST00000320081 AGBL4Q5VU57 503 aa15.2■□□□□ 0.02
CLIP4-201ENST00000320081 LIPNQ5VXI9 398 aa15.2■□□□□ 0.02
CLIP4-201ENST00000320081 ZNF620Q6ZNG0 422 aa15.2■□□□□ 0.02
CLIP4-201ENST00000320081 ZNF565Q8N9K5 539 aa15.2■□□□□ 0.02
CLIP4-201ENST00000320081 CSNK2A3Q8NEV1 391 aa15.2■□□□□ 0.02
CLIP4-201ENST00000320081 LIN7BQ9HAP6 207 aa15.2■□□□□ 0.02
CLIP4-201ENST00000320081 SLC6A20Q9NP91 592 aa15.2■□□□□ 0.02
CLIP4-201ENST00000320081 COPS3Q9UNS2 423 aa15.2■□□□□ 0.02
CLIP4-201ENST00000320081 DGCR2P98153 550 aa15.2■□□□□ 0.02
CLIP4-201ENST00000320081 TDGQ13569 410 aa15.2■□□□□ 0.02
CLIP4-201ENST00000320081 SPAG16Q8N0X2 631 aa15.2■□□□□ 0.02
CLIP4-201ENST00000320081 BRIX1Q8TDN6 353 aaKnown RBP15.2■□□□□ 0.02
CLIP4-201ENST00000320081 C8orf44Q96CB5 159 aa15.2■□□□□ 0.02
CLIP4-201ENST00000320081 SLC38A1Q9H2H9 487 aa15.2■□□□□ 0.02
CLIP4-201ENST00000320081 REV1Q9UBZ9 1251 aa15.2■□□□□ 0.02
CLIP4-201ENST00000320081 GABRR1P24046 479 aa15.19■□□□□ 0.02
CLIP4-201ENST00000320081 PRKAR1BP31321 381 aa15.19■□□□□ 0.02
CLIP4-201ENST00000320081 WBP2NLQ6ICG8 309 aa15.19■□□□□ 0.02
CLIP4-201ENST00000320081 LILRA6Q6PI73 481 aa15.19■□□□□ 0.02
CLIP4-201ENST00000320081 ZNF440Q8IYI8 595 aa15.19■□□□□ 0.02
CLIP4-201ENST00000320081 SLIRPQ9GZT3 109 aaKnown RBP15.19■□□□□ 0.02
CLIP4-201ENST00000320081 DOCK1Q14185 1865 aa15.19■□□□□ 0.02
CLIP4-201ENST00000320081 COL11A2P13942 1736 aaPredicted RBP15.19■□□□□ 0.02
CLIP4-201ENST00000320081 HCRTR1O43613 425 aa15.19■□□□□ 0.02
CLIP4-201ENST00000320081 MCCD1P59942 119 aaPredicted RBP15.19■□□□□ 0.02
CLIP4-201ENST00000320081 FAM76BQ5HYJ3 339 aa15.19■□□□□ 0.02
CLIP4-201ENST00000320081 ADGRF3Q8IZF5 1079 aa15.19■□□□□ 0.02
CLIP4-201ENST00000320081 URM1Q9BTM9 101 aaKnown RBP15.19■□□□□ 0.02
CLIP4-201ENST00000320081 ACTR6Q9GZN1 396 aa15.19■□□□□ 0.02
CLIP4-201ENST00000320081 SCML1Q9UN30 329 aa15.19■□□□□ 0.02
CLIP4-201ENST00000320081 MEMO1Q9Y316 297 aa15.19■□□□□ 0.02
CLIP4-201ENST00000320081 A6NLC8 198 aa15.19■□□□□ 0.02
CLIP4-201ENST00000320081 HOXB5P09067 269 aa15.19■□□□□ 0.02
CLIP4-201ENST00000320081 HBMQ6B0K9 141 aa15.19■□□□□ 0.02
CLIP4-201ENST00000320081 LRRC69Q6ZNQ3 347 aa15.19■□□□□ 0.02
CLIP4-201ENST00000320081 LRRC3BQ96PB8 259 aa15.19■□□□□ 0.02
CLIP4-201ENST00000320081 PELOQ9BRX2 385 aaKnown RBP15.19■□□□□ 0.02
CLIP4-201ENST00000320081 SLC5A7Q9GZV3 580 aa15.19■□□□□ 0.02
CLIP4-201ENST00000320081 FLVCR2Q9UPI3 526 aa15.19■□□□□ 0.02
CLIP4-201ENST00000320081 ZNF281Q9Y2X9 895 aa15.19■□□□□ 0.02
CLIP4-201ENST00000320081 DOCK6Q96HP0 2047 aa15.18■□□□□ 0.02
CLIP4-201ENST00000320081 ACOT7O00154 380 aa15.18■□□□□ 0.02
CLIP4-201ENST00000320081 IGHV3-9P01782 118 aa15.18■□□□□ 0.02
CLIP4-201ENST00000320081 ZNF28P17035 718 aa15.18■□□□□ 0.02
CLIP4-201ENST00000320081 RAB38P57729 211 aa15.18■□□□□ 0.02
CLIP4-201ENST00000320081 SORDQ00796 357 aa15.18■□□□□ 0.02
CLIP4-201ENST00000320081 CCINQ13939 588 aa15.18■□□□□ 0.02
CLIP4-201ENST00000320081 ABCA7Q8IZY2 2146 aa15.18■□□□□ 0.02
CLIP4-201ENST00000320081 IL17RCQ8NAC3 791 aa15.18■□□□□ 0.02
CLIP4-201ENST00000320081 ELP5Q8TE02 316 aa15.18■□□□□ 0.02
CLIP4-201ENST00000320081 MRGPRX3Q96LB0 322 aa15.18■□□□□ 0.02
CLIP4-201ENST00000320081 COL5A3P25940 1745 aaPredicted RBP15.18■□□□□ 0.02
CLIP4-201ENST00000320081 AKR7A2O43488 359 aa15.18■□□□□ 0.02
CLIP4-201ENST00000320081 UTS2O95399 124 aa15.18■□□□□ 0.02
CLIP4-201ENST00000320081 TCRBP04435 133 aa15.18■□□□□ 0.02
CLIP4-201ENST00000320081 CALCBP10092 127 aa15.18■□□□□ 0.02
CLIP4-201ENST00000320081 EEF1A1P68104 462 aaKnown RBP15.18■□□□□ 0.02
CLIP4-201ENST00000320081 SLC9A3R2Q15599 337 aa15.18■□□□□ 0.02
CLIP4-201ENST00000320081 CHRDL2Q6WN34 429 aa15.18■□□□□ 0.02
CLIP4-201ENST00000320081 SSX6Q7RTT6 188 aa15.18■□□□□ 0.02
CLIP4-201ENST00000320081 YIPF6Q96EC8 236 aa15.18■□□□□ 0.02
CLIP4-201ENST00000320081 CENPFP49454 3210 aa15.18■□□□□ 0.02
CLIP4-201ENST00000320081 IGHV3-64DA0A0J9YX35 117 aa15.18■□□□□ 0.02
CLIP4-201ENST00000320081 DVL2O14641 736 aa15.18■□□□□ 0.02
CLIP4-201ENST00000320081 ZNF217O75362 1048 aa15.18■□□□□ 0.02
CLIP4-201ENST00000320081 RFPL3O75679 317 aa15.18■□□□□ 0.02
CLIP4-201ENST00000320081 SULT1C4O75897 302 aa15.18■□□□□ 0.02
CLIP4-201ENST00000320081 TRHRP34981 398 aaPredicted RBP15.18■□□□□ 0.02
CLIP4-201ENST00000320081 GLP1RP43220 463 aa15.18■□□□□ 0.02
CLIP4-201ENST00000320081 DPTQ07507 201 aa15.18■□□□□ 0.02
CLIP4-201ENST00000320081 SLC16A12Q6ZSM3 486 aa15.18■□□□□ 0.02
CLIP4-201ENST00000320081 FAM26EQ8N5C1 309 aa15.18■□□□□ 0.02
CLIP4-201ENST00000320081 ZNF417Q8TAU3 575 aa15.18■□□□□ 0.02
CLIP4-201ENST00000320081 PHOSPHO2Q8TCD6 241 aa15.18■□□□□ 0.02
CLIP4-201ENST00000320081 GPR119Q8TDV5 335 aa15.18■□□□□ 0.02
CLIP4-201ENST00000320081 DERL3Q96Q80 235 aa15.18■□□□□ 0.02
CLIP4-201ENST00000320081 GABARAPL3Q9BY60 117 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms