RNA–Protein interactions for RNA: ENST00000312481.11

COL6A5-202, Transcript of collagen type VI alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL6A5, Length 9,226 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A5-202ENST00000312481 ARHGAP11BQ3KRB8 267 aa8.2□□□□□ -1.1
COL6A5-202ENST00000312481 SDHAF4Q5VUM1 108 aa8.2□□□□□ -1.1
COL6A5-202ENST00000312481 CD300LFQ8TDQ1 290 aa8.2□□□□□ -1.1
COL6A5-202ENST00000312481 NEIL2Q969S2 332 aa8.2□□□□□ -1.1
COL6A5-202ENST00000312481 UBL7Q96S82 380 aaPredicted RBP8.2□□□□□ -1.1
COL6A5-202ENST00000312481 TPST2O60704 377 aa8.19□□□□□ -1.1
COL6A5-202ENST00000312481 SERPINA5P05154 406 aa8.19□□□□□ -1.1
COL6A5-202ENST00000312481 C17orf67Q0P5P2 114 aa8.19□□□□□ -1.1
COL6A5-202ENST00000312481 SPRED3Q2MJR0 410 aa8.19□□□□□ -1.1
COL6A5-202ENST00000312481 SPIN3Q5JUX0 258 aa8.19□□□□□ -1.1
COL6A5-202ENST00000312481 FIGNL1Q6PIW4 674 aa8.19□□□□□ -1.1
COL6A5-202ENST00000312481 CPNE8Q86YQ8 564 aa8.19□□□□□ -1.1
COL6A5-202ENST00000312481 OR10R2Q8NGX6 335 aa8.19□□□□□ -1.1
COL6A5-202ENST00000312481 NKD1Q969G9 470 aa8.19□□□□□ -1.1
COL6A5-202ENST00000312481 APIPQ96GX9 242 aa8.19□□□□□ -1.1
COL6A5-202ENST00000312481 ARHGAP9Q9BRR9 750 aa8.19□□□□□ -1.1
COL6A5-202ENST00000312481 DPCDQ9BVM2 203 aaPredicted RBP8.19□□□□□ -1.1
COL6A5-202ENST00000312481 LIN28AQ9H9Z2 209 aaKnown RBP8.19□□□□□ -1.1
COL6A5-202ENST00000312481 SIDT1Q9NXL6 827 aaKnown RBP8.19□□□□□ -1.1
COL6A5-202ENST00000312481 LRFN1Q9P244 771 aa8.19□□□□□ -1.1
COL6A5-202ENST00000312481 SERPINE3A8MV23 424 aa8.19□□□□□ -1.1
COL6A5-202ENST00000312481 E7EQ34 232 aa8.19□□□□□ -1.1
COL6A5-202ENST00000312481 ZNF92Q03936 586 aa8.19□□□□□ -1.1
COL6A5-202ENST00000312481 TMEM107Q6UX40 140 aa8.19□□□□□ -1.1
COL6A5-202ENST00000312481 PARGQ86W56 976 aa8.19□□□□□ -1.1
COL6A5-202ENST00000312481 RBCK1Q9BYM8 510 aa8.19□□□□□ -1.1
COL6A5-202ENST00000312481 OR7A17O14581 309 aa8.19□□□□□ -1.1
COL6A5-202ENST00000312481 HOXC11O43248 304 aaPredicted RBP8.19□□□□□ -1.1
COL6A5-202ENST00000312481 GP1BAP07359 652 aa8.19□□□□□ -1.1
COL6A5-202ENST00000312481 DCNP07585 359 aaKnown RBP8.19□□□□□ -1.1
COL6A5-202ENST00000312481 TAL1P17542 331 aaPredicted RBP8.19□□□□□ -1.1
COL6A5-202ENST00000312481 ANXA7P20073 488 aaKnown RBP8.19□□□□□ -1.1
COL6A5-202ENST00000312481 PRKACGP22612 351 aa8.19□□□□□ -1.1
COL6A5-202ENST00000312481 HTR2CP28335 458 aa8.19□□□□□ -1.1
COL6A5-202ENST00000312481 DAPP51397 102 aa8.19□□□□□ -1.1
COL6A5-202ENST00000312481 CATR1Q13166 79 aa8.19□□□□□ -1.1
COL6A5-202ENST00000312481 ZNF852Q6ZMS4 543 aa8.19□□□□□ -1.1
COL6A5-202ENST00000312481 KCT2Q8NC54 265 aa8.19□□□□□ -1.1
COL6A5-202ENST00000312481 CDS1Q92903 461 aa8.19□□□□□ -1.1
COL6A5-202ENST00000312481 INTS12Q96CB8 462 aaKnown RBP8.19□□□□□ -1.1
COL6A5-202ENST00000312481 OR2A14Q96R47 310 aa8.19□□□□□ -1.1
COL6A5-202ENST00000312481 INPP5KQ9BT40 448 aa8.19□□□□□ -1.1
COL6A5-202ENST00000312481 HAPLN2Q9GZV7 340 aa8.19□□□□□ -1.1
COL6A5-202ENST00000312481 COPS3Q9UNS2 423 aa8.19□□□□□ -1.1
COL6A5-202ENST00000312481 ABCA7Q8IZY2 2146 aa8.19□□□□□ -1.1
COL6A5-202ENST00000312481 NUP210Q8TEM1 1887 aaPredicted RBP8.19□□□□□ -1.1
COL6A5-202ENST00000312481 CD8B2A6NJW9 211 aa8.19□□□□□ -1.1
COL6A5-202ENST00000312481 XRCC3O43542 346 aa8.19□□□□□ -1.1
COL6A5-202ENST00000312481 INHAP05111 366 aa8.19□□□□□ -1.1
COL6A5-202ENST00000312481 SPP1P10451 314 aa8.19□□□□□ -1.1
COL6A5-202ENST00000312481 CD8BP10966 210 aa8.19□□□□□ -1.1
COL6A5-202ENST00000312481 DHPSP49366 369 aaPredicted RBP8.19□□□□□ -1.1
COL6A5-202ENST00000312481 SSTP61278 116 aa8.19□□□□□ -1.1
COL6A5-202ENST00000312481 GPR18Q14330 331 aa8.19□□□□□ -1.1
COL6A5-202ENST00000312481 OR1M1Q8NGA1 313 aa8.19□□□□□ -1.1
COL6A5-202ENST00000312481 OR6K3Q8NGY3 331 aa8.19□□□□□ -1.1
COL6A5-202ENST00000312481 ZNF480Q8WV37 535 aa8.19□□□□□ -1.1
COL6A5-202ENST00000312481 OR1F2PQ96R84 312 aa8.19□□□□□ -1.1
COL6A5-202ENST00000312481 CYSLTR2Q9NS75 346 aa8.19□□□□□ -1.1
COL6A5-202ENST00000312481 THADAQ6YHU6 1953 aa8.19□□□□□ -1.1
COL6A5-202ENST00000312481 IGF2P01344 180 aa8.19□□□□□ -1.1
COL6A5-202ENST00000312481 ALAS2P22557 587 aa8.19□□□□□ -1.1
COL6A5-202ENST00000312481 EIF2B1Q14232 305 aaKnown RBP8.19□□□□□ -1.1
COL6A5-202ENST00000312481 RTL8BQ17RB0 113 aa8.19□□□□□ -1.1
COL6A5-202ENST00000312481 DCST2Q5T1A1 773 aa8.19□□□□□ -1.1
COL6A5-202ENST00000312481 SLC30A7Q8NEW0 376 aa8.19□□□□□ -1.1
COL6A5-202ENST00000312481 OR51L1Q8NGJ5 315 aa8.19□□□□□ -1.1
COL6A5-202ENST00000312481 GAS2L1Q99501 681 aaPredicted RBP8.19□□□□□ -1.1
COL6A5-202ENST00000312481 KDM4FA0A1W2PPD8 638 aa8.19□□□□□ -1.1
COL6A5-202ENST00000312481 TSPAN11A1L157 253 aa8.19□□□□□ -1.1
COL6A5-202ENST00000312481 C2orf78A6NCI8 922 aa8.19□□□□□ -1.1
COL6A5-202ENST00000312481 CAPNS1P04632 268 aa8.19□□□□□ -1.1
COL6A5-202ENST00000312481 SERPINE2P07093 398 aa8.19□□□□□ -1.1
COL6A5-202ENST00000312481 ADRA2CP18825 462 aa8.19□□□□□ -1.1
COL6A5-202ENST00000312481 EVI2BP34910 448 aa8.19□□□□□ -1.1
COL6A5-202ENST00000312481 OPCMLQ14982 345 aa8.19□□□□□ -1.1
COL6A5-202ENST00000312481 MOB1BQ7L9L4 216 aa8.19□□□□□ -1.1
COL6A5-202ENST00000312481 SCD5Q86SK9 330 aa8.19□□□□□ -1.1
COL6A5-202ENST00000312481 LNX2Q8N448 690 aa8.19□□□□□ -1.1
COL6A5-202ENST00000312481 PPP1R13LQ8WUF5 828 aa8.19□□□□□ -1.1
COL6A5-202ENST00000312481 PTX4Q96A99 478 aa8.19□□□□□ -1.1
COL6A5-202ENST00000312481 ATP13A2Q9NQ11 1180 aa8.19□□□□□ -1.1
COL6A5-202ENST00000312481 UFSP2Q9NUQ7 469 aa8.19□□□□□ -1.1
COL6A5-202ENST00000312481 IGLV3-16A0A075B6K0 115 aa8.19□□□□□ -1.1
COL6A5-202ENST00000312481 CHRNB1P11230 501 aa8.19□□□□□ -1.1
COL6A5-202ENST00000312481 MSR1P21757 451 aa8.19□□□□□ -1.1
COL6A5-202ENST00000312481 TNFSF4P23510 183 aa8.19□□□□□ -1.1
COL6A5-202ENST00000312481 HOXD9P28356 352 aaPredicted RBP8.19□□□□□ -1.1
COL6A5-202ENST00000312481 TPMTP51580 245 aa8.19□□□□□ -1.1
COL6A5-202ENST00000312481 ZNF616Q08AN1 781 aa8.19□□□□□ -1.1
COL6A5-202ENST00000312481 FAM53BQ14153 422 aa8.19□□□□□ -1.1
COL6A5-202ENST00000312481 DCUN1D4Q92564 292 aa8.19□□□□□ -1.1
COL6A5-202ENST00000312481 CLIP3Q96DZ5 547 aa8.19□□□□□ -1.1
COL6A5-202ENST00000312481 C4orf36Q96KX1 117 aa8.19□□□□□ -1.1
COL6A5-202ENST00000312481 TCRBV5S2A0A599 114 aa8.18□□□□□ -1.1
COL6A5-202ENST00000312481 HPGDSO60760 199 aa8.18□□□□□ -1.1
COL6A5-202ENST00000312481 TBX18O95935 607 aa8.18□□□□□ -1.1
COL6A5-202ENST00000312481 PLGP00747 810 aaPredicted RBP8.18□□□□□ -1.1
COL6A5-202ENST00000312481 SELEP16581 610 aa8.18□□□□□ -1.1
COL6A5-202ENST00000312481 MAGP20916 626 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms