RNA–Protein interactions for RNA: ENST00000306085.10

TRIM56-201, Transcript of tripartite motif containing 56, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TRIM56, Length 10,952 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-201ENST00000306085 HELTA6NFD8 242 aa12.52□□□□□ -0.41
TRIM56-201ENST00000306085 C4orf47A7E2U8 309 aa12.52□□□□□ -0.41
TRIM56-201ENST00000306085 DCTN6O00399 190 aa12.52□□□□□ -0.41
TRIM56-201ENST00000306085 FAM189BP81408 668 aa12.52□□□□□ -0.41
TRIM56-201ENST00000306085 SLC10A6Q3KNW5 377 aa12.52□□□□□ -0.41
TRIM56-201ENST00000306085 AKIRIN1Q9H9L7 192 aaPredicted RBP12.52□□□□□ -0.41
TRIM56-201ENST00000306085 HHLA2Q9UM44 414 aa12.52□□□□□ -0.41
TRIM56-201ENST00000306085 TMEM269A0A1B0GVZ9 245 aa12.52□□□□□ -0.41
TRIM56-201ENST00000306085 GLB1P16278 677 aa12.52□□□□□ -0.41
TRIM56-201ENST00000306085 C1orf61Q13536 156 aa12.52□□□□□ -0.41
TRIM56-201ENST00000306085 DUSP6Q16828 381 aa12.52□□□□□ -0.41
TRIM56-201ENST00000306085 OR5D18Q8NGL1 313 aa12.52□□□□□ -0.41
TRIM56-201ENST00000306085 OR8B4Q96RC9 309 aa12.52□□□□□ -0.41
TRIM56-201ENST00000306085 C17orf105B2RV13 164 aa12.52□□□□□ -0.41
TRIM56-201ENST00000306085 SLC16A6O15403 523 aa12.52□□□□□ -0.41
TRIM56-201ENST00000306085 NME1P15531 152 aaKnown RBP12.52□□□□□ -0.41
TRIM56-201ENST00000306085 MARC2Q969Z3 335 aa12.52□□□□□ -0.41
TRIM56-201ENST00000306085 IMP4Q96G21 291 aaKnown RBP12.52□□□□□ -0.41
TRIM56-201ENST00000306085 SPOCK3Q9BQ16 436 aa12.52□□□□□ -0.41
TRIM56-201ENST00000306085 USP31Q70CQ4 1352 aa12.52□□□□□ -0.41
TRIM56-201ENST00000306085 USP32Q8NFA0 1604 aa12.52□□□□□ -0.41
TRIM56-201ENST00000306085 SCGB1A1P11684 91 aa12.52□□□□□ -0.41
TRIM56-201ENST00000306085 PRR27Q6MZM9 219 aa12.52□□□□□ -0.41
TRIM56-201ENST00000306085 WDR74Q6RFH5 385 aaPredicted RBP12.52□□□□□ -0.41
TRIM56-201ENST00000306085 H2BFWTQ7Z2G1 175 aa12.52□□□□□ -0.41
TRIM56-201ENST00000306085 OR56B1Q8NGI3 324 aa12.52□□□□□ -0.41
TRIM56-201ENST00000306085 ARHGDIGQ99819 225 aa12.52□□□□□ -0.41
TRIM56-201ENST00000306085 AMBRA1Q9C0C7 1298 aa12.52□□□□□ -0.41
TRIM56-201ENST00000306085 DDX31Q9H8H2 851 aaKnown RBP12.52□□□□□ -0.41
TRIM56-201ENST00000306085 APOBEC3GQ9HC16 384 aaKnown RBP12.52□□□□□ -0.41
TRIM56-201ENST00000306085 ANKMY1Q9P2S6 941 aa12.52□□□□□ -0.41
TRIM56-201ENST00000306085 APOBEC3BQ9UH17 382 aaKnown RBP12.52□□□□□ -0.41
TRIM56-201ENST00000306085 PIKFYVEQ9Y2I7 2098 aa12.52□□□□□ -0.41
TRIM56-201ENST00000306085 XKRY2A2RUG3 117 aa12.52□□□□□ -0.41
TRIM56-201ENST00000306085 ZNF724A8MTY0 619 aa12.52□□□□□ -0.41
TRIM56-201ENST00000306085 NXPH2O95156 264 aa12.52□□□□□ -0.41
TRIM56-201ENST00000306085 FGF3P11487 239 aaPredicted RBP12.52□□□□□ -0.41
TRIM56-201ENST00000306085 CORO2AQ92828 525 aa12.52□□□□□ -0.41
TRIM56-201ENST00000306085 METTL9Q9H1A3 318 aa12.52□□□□□ -0.41
TRIM56-201ENST00000306085 THEM4Q5T1C6 240 aa12.51□□□□□ -0.41
TRIM56-201ENST00000306085 STEAP1BQ6NZ63 245 aa12.51□□□□□ -0.41
TRIM56-201ENST00000306085 P4HTMQ9NXG6 502 aa12.51□□□□□ -0.41
TRIM56-201ENST00000306085 SLC9B1P1A6NJY1 282 aa12.51□□□□□ -0.41
TRIM56-201ENST00000306085 SSSCA1O60232 199 aa12.51□□□□□ -0.41
TRIM56-201ENST00000306085 FUT1P19526 365 aa12.51□□□□□ -0.41
TRIM56-201ENST00000306085 HTR5AP47898 357 aa12.51□□□□□ -0.41
TRIM56-201ENST00000306085 EDDM3BP56851 147 aa12.51□□□□□ -0.41
TRIM56-201ENST00000306085 ZNF337Q9Y3M9 751 aa12.51□□□□□ -0.41
TRIM56-201ENST00000306085 TRAV20A0A0B4J274 112 aa12.51□□□□□ -0.41
TRIM56-201ENST00000306085 FRS3O43559 492 aa12.51□□□□□ -0.41
TRIM56-201ENST00000306085 PDGFBP01127 241 aaPredicted RBP12.51□□□□□ -0.41
TRIM56-201ENST00000306085 SMPD1P17405 629 aa12.51□□□□□ -0.41
TRIM56-201ENST00000306085 TCTE1Q5JU00 501 aa12.51□□□□□ -0.41
TRIM56-201ENST00000306085 OR7E24Q6IFN5 339 aa12.51□□□□□ -0.41
TRIM56-201ENST00000306085 SLC35D2Q76EJ3 337 aa12.51□□□□□ -0.41
TRIM56-201ENST00000306085 B4GALT6Q9UBX8 382 aa12.51□□□□□ -0.41
TRIM56-201ENST00000306085 TNS2Q63HR2 1409 aa12.51□□□□□ -0.41
TRIM56-201ENST00000306085 KIAA1210Q9ULL0 1709 aa12.51□□□□□ -0.41
TRIM56-201ENST00000306085 TO15178 435 aa12.51□□□□□ -0.41
TRIM56-201ENST00000306085 DDAH2O95865 285 aa12.51□□□□□ -0.41
TRIM56-201ENST00000306085 CORO6Q6QEF8 472 aa12.51□□□□□ -0.41
TRIM56-201ENST00000306085 LFNGQ8NES3 379 aa12.51□□□□□ -0.41
TRIM56-201ENST00000306085 HHIPQ96QV1 700 aa12.51□□□□□ -0.41
TRIM56-201ENST00000306085 A0A1B0GVG6 124 aa12.51□□□□□ -0.41
TRIM56-201ENST00000306085 UNGP13051 313 aaPredicted RBP12.51□□□□□ -0.41
TRIM56-201ENST00000306085 CD1DP15813 335 aa12.51□□□□□ -0.41
TRIM56-201ENST00000306085 NADSYN1Q6IA69 706 aa12.51□□□□□ -0.41
TRIM56-201ENST00000306085 Q6ZVL8 140 aa12.51□□□□□ -0.41
TRIM56-201ENST00000306085 XYLT2Q9H1B5 865 aa12.51□□□□□ -0.41
TRIM56-201ENST00000306085 INTS1Q8N201 2190 aaKnown RBP12.51□□□□□ -0.41
TRIM56-201ENST00000306085 PMS2P1A4D2B8 440 aa12.51□□□□□ -0.41
TRIM56-201ENST00000306085 SLC6A8P48029 635 aa12.51□□□□□ -0.41
TRIM56-201ENST00000306085 PDE7AQ13946 482 aa12.51□□□□□ -0.41
TRIM56-201ENST00000306085 GPR18Q14330 331 aa12.51□□□□□ -0.41
TRIM56-201ENST00000306085 EDDM3AQ14507 147 aa12.51□□□□□ -0.41
TRIM56-201ENST00000306085 IER5LQ5T953 404 aa12.51□□□□□ -0.41
TRIM56-201ENST00000306085 TMEM182Q6ZP80 229 aaPredicted RBP12.51□□□□□ -0.41
TRIM56-201ENST00000306085 CPEB2Q7Z5Q1 589 aaKnown RBP12.51□□□□□ -0.41
TRIM56-201ENST00000306085 HAVCR2Q8TDQ0 301 aa12.51□□□□□ -0.41
TRIM56-201ENST00000306085 LMF2Q9BU23 707 aaKnown RBP12.51□□□□□ -0.41
TRIM56-201ENST00000306085 ZNF281Q9Y2X9 895 aa12.51□□□□□ -0.41
TRIM56-201ENST00000306085 SLC17A1Q14916 467 aa12.51□□□□□ -0.41
TRIM56-201ENST00000306085 SLC36A2Q495M3 483 aa12.51□□□□□ -0.41
TRIM56-201ENST00000306085 DPPA4Q7L190 304 aa12.51□□□□□ -0.41
TRIM56-201ENST00000306085 LGALS14Q8TCE9 139 aa12.51□□□□□ -0.41
TRIM56-201ENST00000306085 SYT17Q9BSW7 474 aa12.51□□□□□ -0.41
TRIM56-201ENST00000306085 PARD6AQ9NPB6 346 aa12.51□□□□□ -0.41
TRIM56-201ENST00000306085 DOK2O60496 412 aa12.51□□□□□ -0.41
TRIM56-201ENST00000306085 HTR4Q13639 388 aa12.51□□□□□ -0.41
TRIM56-201ENST00000306085 IRF7Q92985 503 aa12.51□□□□□ -0.41
TRIM56-201ENST00000306085 IQGAP1P46940 1657 aa12.5□□□□□ -0.41
TRIM56-201ENST00000306085 RAB40ALP0C0E4 278 aa12.5□□□□□ -0.41
TRIM56-201ENST00000306085 RAB40AQ8WXH6 277 aa12.5□□□□□ -0.41
TRIM56-201ENST00000306085 LYSMD1Q96S90 227 aa12.5□□□□□ -0.41
TRIM56-201ENST00000306085 CA14Q9ULX7 337 aa12.5□□□□□ -0.41
TRIM56-201ENST00000306085 APBB3O95704 486 aa12.5□□□□□ -0.41
TRIM56-201ENST00000306085 SULT1A2P50226 295 aa12.5□□□□□ -0.41
TRIM56-201ENST00000306085 CDKN2DP55273 166 aa12.5□□□□□ -0.41
TRIM56-201ENST00000306085 BCL7AQ4VC05 210 aa12.5□□□□□ -0.41
TRIM56-201ENST00000306085 ZNF626Q68DY1 528 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 75.8 ms