RNA–Protein interactions for RNA: ENST00000306042.9

PTPRE-202, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 1 (best) BASIC

Gene PTPRE, Length 4,957 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-202ENST00000306042 C1orf198Q9H425 327 aa8.47□□□□□ -1.05
PTPRE-202ENST00000306042 FKRPQ9H9S5 495 aa8.47□□□□□ -1.05
PTPRE-202ENST00000306042 PAK1IP1Q9NWT1 392 aaPredicted RBP8.47□□□□□ -1.05
PTPRE-202ENST00000306042 COMMD9Q9P000 198 aa8.47□□□□□ -1.05
PTPRE-202ENST00000306042 PMF1-BGLAPU3KQ54 211 aa8.47□□□□□ -1.05
PTPRE-202ENST00000306042 A0A1W2PPK0 400 aa8.46□□□□□ -1.05
PTPRE-202ENST00000306042 ANKUB1A6NFN9 424 aa8.46□□□□□ -1.05
PTPRE-202ENST00000306042 WRBO00258 174 aa8.46□□□□□ -1.05
PTPRE-202ENST00000306042 SURF4O15260 269 aa8.46□□□□□ -1.05
PTPRE-202ENST00000306042 STSP08842 583 aa8.46□□□□□ -1.05
PTPRE-202ENST00000306042 T-ENOLP0DO92 83 aa8.46□□□□□ -1.05
PTPRE-202ENST00000306042 GM2AP17900 193 aa8.46□□□□□ -1.05
PTPRE-202ENST00000306042 CNR1P21554 472 aa8.46□□□□□ -1.05
PTPRE-202ENST00000306042 CSF2RBP32927 897 aa8.46□□□□□ -1.05
PTPRE-202ENST00000306042 GLP1RP43220 463 aa8.46□□□□□ -1.05
PTPRE-202ENST00000306042 GIPRP48546 466 aa8.46□□□□□ -1.05
PTPRE-202ENST00000306042 GNG2P59768 71 aa8.46□□□□□ -1.05
PTPRE-202ENST00000306042 FOXF1Q12946 379 aa8.46□□□□□ -1.05
PTPRE-202ENST00000306042 OCLNQ16625 522 aa8.46□□□□□ -1.05
PTPRE-202ENST00000306042 DUSP7Q16829 419 aa8.46□□□□□ -1.05
PTPRE-202ENST00000306042 ZNF791Q3KP31 576 aaPredicted RBP8.46□□□□□ -1.05
PTPRE-202ENST00000306042 PLAG1Q6DJT9 500 aa8.46□□□□□ -1.05
PTPRE-202ENST00000306042 C19orf48Q6RUI8 117 aa8.46□□□□□ -1.05
PTPRE-202ENST00000306042 CEACAM19Q7Z692 300 aa8.46□□□□□ -1.05
PTPRE-202ENST00000306042 TRAPPC6BQ86SZ2 158 aa8.46□□□□□ -1.05
PTPRE-202ENST00000306042 MS4A15Q8N5U1 240 aa8.46□□□□□ -1.05
PTPRE-202ENST00000306042 DTX3Q8N9I9 347 aa8.46□□□□□ -1.05
PTPRE-202ENST00000306042 NUBPLQ8TB37 319 aa8.46□□□□□ -1.05
PTPRE-202ENST00000306042 INTS12Q96CB8 462 aaKnown RBP8.46□□□□□ -1.05
PTPRE-202ENST00000306042 DGCR14Q96DF8 476 aaKnown RBP8.46□□□□□ -1.05
PTPRE-202ENST00000306042 PLAC1Q9HBJ0 212 aa8.46□□□□□ -1.05
PTPRE-202ENST00000306042 HDGFL3Q9Y3E1 203 aa8.46□□□□□ -1.05
PTPRE-202ENST00000306042 PCDHGB6Q9Y5F9 930 aa8.46□□□□□ -1.05
PTPRE-202ENST00000306042 PEX16Q9Y5Y5 336 aa8.46□□□□□ -1.05
PTPRE-202ENST00000306042 VGLL3A8MV65 326 aa8.46□□□□□ -1.05
PTPRE-202ENST00000306042 PGAM2P15259 253 aa8.46□□□□□ -1.05
PTPRE-202ENST00000306042 IFNGR1P15260 489 aa8.46□□□□□ -1.05
PTPRE-202ENST00000306042 TBXA2RP21731 343 aa8.46□□□□□ -1.05
PTPRE-202ENST00000306042 DUSP2Q05923 314 aa8.46□□□□□ -1.05
PTPRE-202ENST00000306042 SPHARQ15513 63 aa8.46□□□□□ -1.05
PTPRE-202ENST00000306042 TBC1D28Q2M2D7 210 aa8.46□□□□□ -1.05
PTPRE-202ENST00000306042 LIPKQ5VXJ0 399 aa8.46□□□□□ -1.05
PTPRE-202ENST00000306042 DLEU7Q6UYE1 221 aa8.46□□□□□ -1.05
PTPRE-202ENST00000306042 C16orf47Q6ZP98 133 aaPredicted RBP8.46□□□□□ -1.05
PTPRE-202ENST00000306042 PDSS2Q86YH6 399 aa8.46□□□□□ -1.05
PTPRE-202ENST00000306042 OR11L1Q8NGX0 322 aa8.46□□□□□ -1.05
PTPRE-202ENST00000306042 C15orf40Q8WUR7 153 aa8.46□□□□□ -1.05
PTPRE-202ENST00000306042 TRMT61AQ96FX7 289 aaKnown RBP8.46□□□□□ -1.05
PTPRE-202ENST00000306042 EGLN3Q9H6Z9 239 aa8.46□□□□□ -1.05
PTPRE-202ENST00000306042 SVILO95425 2214 aa8.46□□□□□ -1.05
PTPRE-202ENST00000306042 CACNA1IQ9P0X4 2223 aa8.46□□□□□ -1.06
PTPRE-202ENST00000306042 TMEM269A0A1B0GVZ9 245 aa8.46□□□□□ -1.06
PTPRE-202ENST00000306042 PEBP1P30086 187 aaKnown RBP8.46□□□□□ -1.06
PTPRE-202ENST00000306042 NFATC3Q12968 1075 aa8.46□□□□□ -1.06
PTPRE-202ENST00000306042 PRICKLE4Q2TBC4 344 aa8.46□□□□□ -1.06
PTPRE-202ENST00000306042 ZNF322Q6U7Q0 402 aaPredicted RBP8.46□□□□□ -1.06
PTPRE-202ENST00000306042 DPY19L2P2Q6ZN68 376 aa8.46□□□□□ -1.06
PTPRE-202ENST00000306042 ZBTB44Q8NCP5 570 aa8.46□□□□□ -1.06
PTPRE-202ENST00000306042 PAPD5Q8NDF8 572 aaKnown RBP8.46□□□□□ -1.06
PTPRE-202ENST00000306042 NPRL2Q8WTW4 380 aa8.46□□□□□ -1.06
PTPRE-202ENST00000306042 MICU1Q9BPX6 476 aa8.46□□□□□ -1.06
PTPRE-202ENST00000306042 C1QTNF6Q9BXI9 259 aa8.46□□□□□ -1.06
PTPRE-202ENST00000306042 ELOVL3Q9HB03 270 aa8.46□□□□□ -1.06
PTPRE-202ENST00000306042 BCL2L10Q9HD36 194 aa8.46□□□□□ -1.06
PTPRE-202ENST00000306042 ZNF226Q9NYT6 803 aa8.46□□□□□ -1.06
PTPRE-202ENST00000306042 H0YJX3 145 aa8.46□□□□□ -1.06
PTPRE-202ENST00000306042 NKX2-2O95096 273 aa8.46□□□□□ -1.06
PTPRE-202ENST00000306042 CRYAAP02489 173 aa8.46□□□□□ -1.06
PTPRE-202ENST00000306042 MAP2K6P52564 334 aa8.46□□□□□ -1.06
PTPRE-202ENST00000306042 CXCR4P61073 352 aa8.46□□□□□ -1.06
PTPRE-202ENST00000306042 HSF1Q00613 529 aa8.46□□□□□ -1.06
PTPRE-202ENST00000306042 GXYLT1Q4G148 440 aa8.46□□□□□ -1.06
PTPRE-202ENST00000306042 TP53I3Q53FA7 332 aa8.46□□□□□ -1.06
PTPRE-202ENST00000306042 ZNF367Q7RTV3 350 aa8.46□□□□□ -1.06
PTPRE-202ENST00000306042 BTLAQ7Z6A9 289 aa8.46□□□□□ -1.06
PTPRE-202ENST00000306042 EMC6Q9BV81 110 aa8.46□□□□□ -1.06
PTPRE-202ENST00000306042 SYT4Q9H2B2 425 aa8.46□□□□□ -1.06
PTPRE-202ENST00000306042 DECR2Q9NUI1 292 aa8.46□□□□□ -1.06
PTPRE-202ENST00000306042 FAM90A27PA6NNH2 459 aa8.45□□□□□ -1.06
PTPRE-202ENST00000306042 FAM25EA8MYX2 175 aa8.45□□□□□ -1.06
PTPRE-202ENST00000306042 CCRL2O00421 344 aa8.45□□□□□ -1.06
PTPRE-202ENST00000306042 SSNA1O43805 119 aa8.45□□□□□ -1.06
PTPRE-202ENST00000306042 GSTT2BP0CG30 244 aa8.45□□□□□ -1.06
PTPRE-202ENST00000306042 HOXB9P17482 250 aaPredicted RBP8.45□□□□□ -1.06
PTPRE-202ENST00000306042 PAX7P23759 505 aa8.45□□□□□ -1.06
PTPRE-202ENST00000306042 CDC20Q12834 499 aa8.45□□□□□ -1.06
PTPRE-202ENST00000306042 OR7E24Q6IFN5 339 aa8.45□□□□□ -1.06
PTPRE-202ENST00000306042 SLC22A25Q6T423 547 aa8.45□□□□□ -1.06
PTPRE-202ENST00000306042 POC5Q8NA72 575 aa8.45□□□□□ -1.06
PTPRE-202ENST00000306042 ASB17Q8WXJ9 295 aa8.45□□□□□ -1.06
PTPRE-202ENST00000306042 RASL10BQ96S79 203 aa8.45□□□□□ -1.06
PTPRE-202ENST00000306042 ALG8Q9BVK2 526 aa8.45□□□□□ -1.06
PTPRE-202ENST00000306042 ZNF442Q9H7R0 627 aa8.45□□□□□ -1.06
PTPRE-202ENST00000306042 VSX1Q9NZR4 365 aaPredicted RBP8.45□□□□□ -1.06
PTPRE-202ENST00000306042 MALT1Q9UDY8 824 aa8.45□□□□□ -1.06
PTPRE-202ENST00000306042 ADAM18Q9Y3Q7 739 aa8.45□□□□□ -1.06
PTPRE-202ENST00000306042 CCDC182A6NF36 153 aa8.45□□□□□ -1.06
PTPRE-202ENST00000306042 CDRT1O95170 752 aa8.45□□□□□ -1.06
PTPRE-202ENST00000306042 BMP5P22003 454 aa8.45□□□□□ -1.06
PTPRE-202ENST00000306042 CFL1P23528 166 aaKnown RBP8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms