RNA–Protein interactions for RNA: ENST00000304636.7

COL3A1-201, Transcript of collagen type III alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL3A1, Length 5,543 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1-201ENST00000304636 P2RY2P41231 377 aa11.91□□□□□ -0.5
COL3A1-201ENST00000304636 RAB4BP61018 213 aa11.91□□□□□ -0.5
COL3A1-201ENST00000304636 VASH1Q7L8A9 365 aaPredicted RBP11.91□□□□□ -0.5
COL3A1-201ENST00000304636 DHRS9Q9BPW9 319 aa11.91□□□□□ -0.5
COL3A1-201ENST00000304636 NKX6-2Q9C056 277 aaPredicted RBP11.91□□□□□ -0.5
COL3A1-201ENST00000304636 BRINP1O60477 761 aa11.91□□□□□ -0.5
COL3A1-201ENST00000304636 SIX6O95475 246 aa11.91□□□□□ -0.5
COL3A1-201ENST00000304636 CNR1P21554 472 aa11.91□□□□□ -0.5
COL3A1-201ENST00000304636 ERVFC1P60507 584 aa11.91□□□□□ -0.5
COL3A1-201ENST00000304636 AFMIDQ63HM1 303 aa11.91□□□□□ -0.5
COL3A1-201ENST00000304636 ZNF852Q6ZMS4 543 aa11.91□□□□□ -0.5
COL3A1-201ENST00000304636 PRSS45Q7RTY3 260 aa11.91□□□□□ -0.5
COL3A1-201ENST00000304636 DOK1Q99704 481 aa11.91□□□□□ -0.5
COL3A1-201ENST00000304636 SRRQ9GZT4 340 aa11.91□□□□□ -0.5
COL3A1-201ENST00000304636 LOC100289279A0A1B0GTE1 492 aa11.91□□□□□ -0.5
COL3A1-201ENST00000304636 CD300LBA8K4G0 201 aa11.91□□□□□ -0.5
COL3A1-201ENST00000304636 CALCBP10092 127 aa11.91□□□□□ -0.5
COL3A1-201ENST00000304636 ZNF136P52737 540 aa11.91□□□□□ -0.5
COL3A1-201ENST00000304636 ST7LQ8TDW4 575 aa11.91□□□□□ -0.5
COL3A1-201ENST00000304636 KLF15Q9UIH9 416 aa11.91□□□□□ -0.5
COL3A1-201ENST00000304636 OR6C6A6NF89 314 aa11.91□□□□□ -0.5
COL3A1-201ENST00000304636 CSF2RAP15509 400 aa11.91□□□□□ -0.5
COL3A1-201ENST00000304636 CD53P19397 219 aa11.91□□□□□ -0.5
COL3A1-201ENST00000304636 MAKP20794 623 aa11.91□□□□□ -0.5
COL3A1-201ENST00000304636 BDH1Q02338 343 aa11.91□□□□□ -0.5
COL3A1-201ENST00000304636 ZNF761Q86XN6 746 aaPredicted RBP11.91□□□□□ -0.5
COL3A1-201ENST00000304636 RBM45Q8IUH3 476 aaKnown RBP11.91□□□□□ -0.5
COL3A1-201ENST00000304636 OR51Q1Q8NH59 317 aa11.91□□□□□ -0.5
COL3A1-201ENST00000304636 ADOQ96SZ5 270 aa11.91□□□□□ -0.5
COL3A1-201ENST00000304636 UQCC2Q9BRT2 126 aa11.91□□□□□ -0.5
COL3A1-201ENST00000304636 PLEKHA3Q9HB20 300 aa11.91□□□□□ -0.5
COL3A1-201ENST00000304636 STARD5Q9NSY2 213 aa11.91□□□□□ -0.5
COL3A1-201ENST00000304636 TUBAL3A6NHL2 446 aa11.9□□□□□ -0.5
COL3A1-201ENST00000304636 A8MXE2 369 aa11.9□□□□□ -0.5
COL3A1-201ENST00000304636 NUDT19A8MXV4 375 aa11.9□□□□□ -0.5
COL3A1-201ENST00000304636 KDM4EB2RXH2 506 aaPredicted RBP11.9□□□□□ -0.5
COL3A1-201ENST00000304636 ANXA7P20073 488 aaKnown RBP11.9□□□□□ -0.5
COL3A1-201ENST00000304636 TSFMP43897 325 aaKnown RBP11.9□□□□□ -0.5
COL3A1-201ENST00000304636 XAF1Q6GPH4 301 aa11.9□□□□□ -0.5
COL3A1-201ENST00000304636 SLC48A1Q6P1K1 146 aa11.9□□□□□ -0.5
COL3A1-201ENST00000304636 TMPPEQ6ZT21 453 aa11.9□□□□□ -0.5
COL3A1-201ENST00000304636 KANSL1Q7Z3B3 1105 aa11.9□□□□□ -0.5
COL3A1-201ENST00000304636 CCDC190Q86UF4 302 aa11.9□□□□□ -0.5
COL3A1-201ENST00000304636 LINC01465Q8N7H1 131 aa11.9□□□□□ -0.5
COL3A1-201ENST00000304636 FAM3DQ96BQ1 224 aa11.9□□□□□ -0.5
COL3A1-201ENST00000304636 SHDQ96IW2 340 aa11.9□□□□□ -0.5
COL3A1-201ENST00000304636 SLC41A2Q96JW4 573 aa11.9□□□□□ -0.5
COL3A1-201ENST00000304636 B4GALT7Q9UBV7 327 aa11.9□□□□□ -0.5
COL3A1-201ENST00000304636 A0A1B0GWA3 101 aa11.9□□□□□ -0.5
COL3A1-201ENST00000304636 GABRB1P18505 474 aa11.9□□□□□ -0.5
COL3A1-201ENST00000304636 CD79BP40259 229 aa11.9□□□□□ -0.5
COL3A1-201ENST00000304636 SLC6A11P48066 632 aa11.9□□□□□ -0.5
COL3A1-201ENST00000304636 NTHL1P78549 312 aa11.9□□□□□ -0.5
COL3A1-201ENST00000304636 EBPQ15125 230 aaKnown RBP11.9□□□□□ -0.5
COL3A1-201ENST00000304636 PAQR6Q6TCH4 344 aa11.9□□□□□ -0.5
COL3A1-201ENST00000304636 C17orf99Q6UX52 265 aa11.9□□□□□ -0.5
COL3A1-201ENST00000304636 ZNF611Q8N823 705 aa11.9□□□□□ -0.5
COL3A1-201ENST00000304636 ZNF680Q8NEM1 530 aa11.9□□□□□ -0.5
COL3A1-201ENST00000304636 HHIPL1Q96JK4 782 aa11.9□□□□□ -0.5
COL3A1-201ENST00000304636 OR5B2Q96R09 309 aa11.9□□□□□ -0.5
COL3A1-201ENST00000304636 TAAR2Q9P1P5 351 aa11.9□□□□□ -0.5
COL3A1-201ENST00000304636 ASB1Q9Y576 335 aa11.9□□□□□ -0.5
COL3A1-201ENST00000304636 KIR2DS5A0A0G2JLQ3 304 aa11.9□□□□□ -0.5
COL3A1-201ENST00000304636 A0A0G2JNG1 304 aa11.9□□□□□ -0.5
COL3A1-201ENST00000304636 VSTM5A8MXK1 200 aa11.9□□□□□ -0.5
COL3A1-201ENST00000304636 KIR2DS3K7RE56 304 aa11.9□□□□□ -0.5
COL3A1-201ENST00000304636 ADRB1P08588 477 aa11.9□□□□□ -0.5
COL3A1-201ENST00000304636 SPNP16150 400 aa11.9□□□□□ -0.5
COL3A1-201ENST00000304636 SERPINA2P20848 420 aa11.9□□□□□ -0.5
COL3A1-201ENST00000304636 NME2P22392 152 aa11.9□□□□□ -0.5
COL3A1-201ENST00000304636 KIR2DS5Q14953 304 aa11.9□□□□□ -0.5
COL3A1-201ENST00000304636 SSX2Q16385 188 aa11.9□□□□□ -0.5
COL3A1-201ENST00000304636 MCATQ8IVS2 390 aaKnown RBP11.9□□□□□ -0.5
COL3A1-201ENST00000304636 RAB3CQ96E17 227 aa11.9□□□□□ -0.5
COL3A1-201ENST00000304636 SGCZQ96LD1 299 aa11.9□□□□□ -0.5
COL3A1-201ENST00000304636 FOXN4Q96NZ1 517 aa11.9□□□□□ -0.5
COL3A1-201ENST00000304636 TEAD3Q99594 435 aa11.9□□□□□ -0.5
COL3A1-201ENST00000304636 SLIRPQ9GZT3 109 aaKnown RBP11.9□□□□□ -0.5
COL3A1-201ENST00000304636 SLAMF7Q9NQ25 335 aa11.9□□□□□ -0.5
COL3A1-201ENST00000304636 TRAPPC4Q9Y296 219 aa11.9□□□□□ -0.5
COL3A1-201ENST00000304636 LAMB1P07942 1786 aa11.9□□□□□ -0.5
COL3A1-201ENST00000304636 D6RAR5 112 aa11.9□□□□□ -0.51
COL3A1-201ENST00000304636 ZNF264O43296 627 aa11.9□□□□□ -0.51
COL3A1-201ENST00000304636 LILRB3O75022 631 aa11.9□□□□□ -0.51
COL3A1-201ENST00000304636 MT-CO2P00403 227 aa11.9□□□□□ -0.51
COL3A1-201ENST00000304636 NAGAP17050 411 aa11.9□□□□□ -0.51
COL3A1-201ENST00000304636 EXOSC6Q5RKV6 272 aaKnown RBP11.9□□□□□ -0.51
COL3A1-201ENST00000304636 POC1BQ8TC44 478 aa11.9□□□□□ -0.51
COL3A1-201ENST00000304636 VSX1Q9NZR4 365 aaPredicted RBP11.9□□□□□ -0.51
COL3A1-201ENST00000304636 STK17BO94768 372 aa11.89□□□□□ -0.51
COL3A1-201ENST00000304636 SEMA4FO95754 770 aa11.89□□□□□ -0.51
COL3A1-201ENST00000304636 KLKB1P03952 638 aa11.89□□□□□ -0.51
COL3A1-201ENST00000304636 FOSL1P15407 271 aa11.89□□□□□ -0.51
COL3A1-201ENST00000304636 SLC6A12P48065 614 aa11.89□□□□□ -0.51
COL3A1-201ENST00000304636 DCAF7P61962 342 aa11.89□□□□□ -0.51
COL3A1-201ENST00000304636 DSC1Q08554 894 aa11.89□□□□□ -0.51
COL3A1-201ENST00000304636 ACSM1Q08AH1 577 aa11.89□□□□□ -0.51
COL3A1-201ENST00000304636 OR10K2Q6IF99 312 aa11.89□□□□□ -0.51
COL3A1-201ENST00000304636 ACSM5Q6NUN0 579 aa11.89□□□□□ -0.51
COL3A1-201ENST00000304636 ZNF836Q6ZNA1 936 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms