RNA–Protein interactions for RNA: ENST00000303406.4

HOXC4-201, Transcript of homeobox C4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC4, Length 1,524 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4-201ENST00000303406 SLC22A8Q8TCC7 542 aa17.62■□□□□ 0.41
HOXC4-201ENST00000303406 DUSP19Q8WTR2 217 aa17.62■□□□□ 0.41
HOXC4-201ENST00000303406 KIAA1143Q96AT1 154 aaPredicted RBP17.62■□□□□ 0.41
HOXC4-201ENST00000303406 ABCB10Q9NRK6 738 aa17.62■□□□□ 0.41
HOXC4-201ENST00000303406 GPN3Q9UHW5 284 aaPredicted RBP17.62■□□□□ 0.41
HOXC4-201ENST00000303406 ST6GALNAC2Q9UJ37 374 aa17.62■□□□□ 0.41
HOXC4-201ENST00000303406 SDK1Q7Z5N4 2213 aa17.61■□□□□ 0.41
HOXC4-201ENST00000303406 SC5DO75845 299 aa17.61■□□□□ 0.41
HOXC4-201ENST00000303406 SERPINA3P01011 423 aa17.61■□□□□ 0.41
HOXC4-201ENST00000303406 KLK3P07288 261 aaPredicted RBP17.61■□□□□ 0.41
HOXC4-201ENST00000303406 RPS5P46782 204 aaKnown RBP17.61■□□□□ 0.41
HOXC4-201ENST00000303406 OR12D2P58182 307 aa17.61■□□□□ 0.41
HOXC4-201ENST00000303406 PPP3R1P63098 170 aa17.61■□□□□ 0.41
HOXC4-201ENST00000303406 C1orf140Q5VVS0 124 aa17.61■□□□□ 0.41
HOXC4-201ENST00000303406 LYPD8Q6UX82 237 aa17.61■□□□□ 0.41
HOXC4-201ENST00000303406 ZPLD1Q8TCW7 415 aa17.61■□□□□ 0.41
HOXC4-201ENST00000303406 ACOT12Q8WYK0 555 aa17.61■□□□□ 0.41
HOXC4-201ENST00000303406 LOXL4Q96JB6 756 aa17.61■□□□□ 0.41
HOXC4-201ENST00000303406 PGLYRP3Q96LB9 341 aa17.61■□□□□ 0.41
HOXC4-201ENST00000303406 TSPAN32Q96QS1 320 aa17.61■□□□□ 0.41
HOXC4-201ENST00000303406 DCLRE1CQ96SD1 692 aaKnown RBP17.61■□□□□ 0.41
HOXC4-201ENST00000303406 CTRCQ99895 268 aa17.61■□□□□ 0.41
HOXC4-201ENST00000303406 ALG12Q9BV10 488 aa17.61■□□□□ 0.41
HOXC4-201ENST00000303406 GTPBP2Q9BX10 602 aaKnown RBP17.61■□□□□ 0.41
HOXC4-201ENST00000303406 TPK1Q9H3S4 243 aa17.61■□□□□ 0.41
HOXC4-201ENST00000303406 V9GYH0 126 aa17.61■□□□□ 0.41
HOXC4-201ENST00000303406 TECTAO75443 2155 aa17.6■□□□□ 0.41
HOXC4-201ENST00000303406 TNFSF12-TNFSF13A0A0A6YY99 330 aa17.6■□□□□ 0.41
HOXC4-201ENST00000303406 B4E171 279 aa17.6■□□□□ 0.41
HOXC4-201ENST00000303406 RGS5O15539 181 aa17.6■□□□□ 0.41
HOXC4-201ENST00000303406 ZNF354AO60765 605 aaPredicted RBP17.6■□□□□ 0.41
HOXC4-201ENST00000303406 DXOO77932 396 aaKnown RBP17.6■□□□□ 0.41
HOXC4-201ENST00000303406 AHSA1O95433 338 aa17.6■□□□□ 0.41
HOXC4-201ENST00000303406 LDOC1O95751 146 aaPredicted RBP17.6■□□□□ 0.41
HOXC4-201ENST00000303406 PTTG1O95997 202 aa17.6■□□□□ 0.41
HOXC4-201ENST00000303406 RENP00797 406 aa17.6■□□□□ 0.41
HOXC4-201ENST00000303406 IGHMP01871 453 aa17.6■□□□□ 0.41
HOXC4-201ENST00000303406 APOBEC1P41238 236 aaKnown RBP17.6■□□□□ 0.41
HOXC4-201ENST00000303406 TSPAN7P41732 249 aa17.6■□□□□ 0.41
HOXC4-201ENST00000303406 FBXW4P57775 412 aa17.6■□□□□ 0.41
HOXC4-201ENST00000303406 MRPL28Q13084 256 aaKnown RBP17.6■□□□□ 0.41
HOXC4-201ENST00000303406 MFSD13AQ14CX5 517 aa17.6■□□□□ 0.41
HOXC4-201ENST00000303406 STEAP3Q658P3 488 aa17.6■□□□□ 0.41
HOXC4-201ENST00000303406 ARL9Q6T311 187 aa17.6■□□□□ 0.41
HOXC4-201ENST00000303406 SSX6Q7RTT6 188 aa17.6■□□□□ 0.41
HOXC4-201ENST00000303406 SLC16A9Q7RTY1 509 aa17.6■□□□□ 0.41
HOXC4-201ENST00000303406 TPRA1Q86W33 373 aa17.6■□□□□ 0.41
HOXC4-201ENST00000303406 SNX29P2Q8IUI4 249 aa17.6■□□□□ 0.41
HOXC4-201ENST00000303406 OR2T4Q8NH00 348 aa17.6■□□□□ 0.41
HOXC4-201ENST00000303406 RPS4Y2Q8TD47 263 aa17.6■□□□□ 0.41
HOXC4-201ENST00000303406 MIXL1Q9H2W2 232 aa17.6■□□□□ 0.41
HOXC4-201ENST00000303406 RERGLQ9H628 205 aa17.6■□□□□ 0.41
HOXC4-201ENST00000303406 CPNE5Q9HCH3 593 aa17.6■□□□□ 0.41
HOXC4-201ENST00000303406 SDHAF3Q9NRP4 125 aa17.6■□□□□ 0.41
HOXC4-201ENST00000303406 TAS2R5Q9NYW4 299 aa17.6■□□□□ 0.41
HOXC4-201ENST00000303406 NCDNQ9UBB6 729 aa17.6■□□□□ 0.41
HOXC4-201ENST00000303406 MYOTQ9UBF9 498 aa17.6■□□□□ 0.41
HOXC4-201ENST00000303406 FUOMA2VDF0 154 aa17.59■□□□□ 0.41
HOXC4-201ENST00000303406 CD8B2A6NJW9 211 aa17.59■□□□□ 0.41
HOXC4-201ENST00000303406 E9PI62 339 aa17.59■□□□□ 0.41
HOXC4-201ENST00000303406 TRIM3O75382 744 aaPredicted RBP17.59■□□□□ 0.41
HOXC4-201ENST00000303406 FBXO45P0C2W1 286 aa17.59■□□□□ 0.41
HOXC4-201ENST00000303406 CD8BP10966 210 aa17.59■□□□□ 0.41
HOXC4-201ENST00000303406 PTBP1P26599 531 aaKnown RBP eCLIP17.59■□□□□ 0.41
HOXC4-201ENST00000303406 CCKBRP32239 447 aa17.59■□□□□ 0.41
HOXC4-201ENST00000303406 CENPAP49450 140 aa17.59■□□□□ 0.41
HOXC4-201ENST00000303406 BCAP31P51572 246 aa17.59■□□□□ 0.41
HOXC4-201ENST00000303406 DEFA1P59665 94 aa17.59■□□□□ 0.41
HOXC4-201ENST00000303406 DEFA3P59666 94 aa17.59■□□□□ 0.41
HOXC4-201ENST00000303406 CDK5R1Q15078 307 aa17.59■□□□□ 0.41
HOXC4-201ENST00000303406 MESTQ5EB52 335 aa17.59■□□□□ 0.41
HOXC4-201ENST00000303406 SLC25A53Q5H9E4 307 aa17.59■□□□□ 0.41
HOXC4-201ENST00000303406 MZT2AQ6P582 158 aa17.59■□□□□ 0.41
HOXC4-201ENST00000303406 RPL22L1Q6P5R6 122 aaKnown RBP17.59■□□□□ 0.41
HOXC4-201ENST00000303406 METAP1DQ6UB28 335 aaPredicted RBP17.59■□□□□ 0.41
HOXC4-201ENST00000303406 FAM198BQ6UWH4 519 aa17.59■□□□□ 0.41
HOXC4-201ENST00000303406 KCTD20Q7Z5Y7 419 aa17.59■□□□□ 0.41
HOXC4-201ENST00000303406 PXKQ7Z7A4 578 aa17.59■□□□□ 0.41
HOXC4-201ENST00000303406 SLC22A16Q86VW1 577 aa17.59■□□□□ 0.41
HOXC4-201ENST00000303406 LAX1Q8IWV1 398 aa17.59■□□□□ 0.41
HOXC4-201ENST00000303406 ABHD4Q8TB40 342 aa17.59■□□□□ 0.41
HOXC4-201ENST00000303406 ELP5Q8TE02 316 aa17.59■□□□□ 0.41
HOXC4-201ENST00000303406 ZNRF4Q8WWF5 429 aa17.59■□□□□ 0.41
HOXC4-201ENST00000303406 THAP4Q8WY91 577 aa17.59■□□□□ 0.41
HOXC4-201ENST00000303406 RNF31Q96EP0 1072 aa17.59■□□□□ 0.41
HOXC4-201ENST00000303406 SDHCQ99643 169 aaPredicted RBP17.59■□□□□ 0.41
HOXC4-201ENST00000303406 ABCB9Q9NP78 766 aa17.59■□□□□ 0.41
HOXC4-201ENST00000303406 INIPQ9NRY2 104 aa17.59■□□□□ 0.41
HOXC4-201ENST00000303406 MRPL39Q9NYK5 338 aaKnown RBP17.59■□□□□ 0.41
HOXC4-201ENST00000303406 C17orf51A8MQB3 221 aa17.58■□□□□ 0.41
HOXC4-201ENST00000303406 C9J4A7 227 aa17.58■□□□□ 0.41
HOXC4-201ENST00000303406 ZNF208O43345 1280 aa17.58■□□□□ 0.41
HOXC4-201ENST00000303406 PRKCAP17252 672 aa17.58■□□□□ 0.41
HOXC4-201ENST00000303406 PYCR1P32322 319 aa17.58■□□□□ 0.41
HOXC4-201ENST00000303406 NAA10P41227 235 aaPredicted RBP17.58■□□□□ 0.41
HOXC4-201ENST00000303406 TGM4P49221 684 aa17.58■□□□□ 0.41
HOXC4-201ENST00000303406 PCOLCEQ15113 449 aa17.58■□□□□ 0.41
HOXC4-201ENST00000303406 SLC6A19Q695T7 634 aa17.58■□□□□ 0.41
HOXC4-201ENST00000303406 ZNF517Q6ZMY9 492 aaPredicted RBP17.58■□□□□ 0.41
HOXC4-201ENST00000303406 SETD6Q8TBK2 473 aa17.58■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms