RNA–Protein interactions for RNA: ENST00000303354.10

SCN9A-201, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN9A, Length 9,786 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-201ENST00000303354 SLCO2A1Q92959 643 aa7.21□□□□□ -1.26
SCN9A-201ENST00000303354 FBXW5Q969U6 566 aa7.21□□□□□ -1.26
SCN9A-201ENST00000303354 GLIPR2Q9H4G4 154 aa7.21□□□□□ -1.26
SCN9A-201ENST00000303354 CLEC1BQ9P126 229 aa7.21□□□□□ -1.26
SCN9A-201ENST00000303354 BTNL2Q9UIR0 455 aa7.21□□□□□ -1.26
SCN9A-201ENST00000303354 MYOM1P52179 1685 aa7.21□□□□□ -1.26
SCN9A-201ENST00000303354 TEX51A0A1B0GUA7 166 aa7.2□□□□□ -1.26
SCN9A-201ENST00000303354 FOXE1O00358 373 aaPredicted RBP7.2□□□□□ -1.26
SCN9A-201ENST00000303354 ZNF205O95201 554 aa7.2□□□□□ -1.26
SCN9A-201ENST00000303354 CDAP32320 146 aa7.2□□□□□ -1.26
SCN9A-201ENST00000303354 RAB41Q5JT25 222 aa7.2□□□□□ -1.26
SCN9A-201ENST00000303354 FAM26DQ5JW98 314 aa7.2□□□□□ -1.26
SCN9A-201ENST00000303354 LHX8Q68G74 356 aa7.2□□□□□ -1.26
SCN9A-201ENST00000303354 DCXRQ7Z4W1 244 aa7.2□□□□□ -1.26
SCN9A-201ENST00000303354 OR11A1Q9GZK7 315 aa7.2□□□□□ -1.26
SCN9A-201ENST00000303354 LHPPQ9H008 270 aa7.2□□□□□ -1.26
SCN9A-201ENST00000303354 ABCG5Q9H222 651 aa7.2□□□□□ -1.26
SCN9A-201ENST00000303354 CXorf36Q9H7Y0 433 aa7.2□□□□□ -1.26
SCN9A-201ENST00000303354 CSNK1G1Q9HCP0 422 aa7.2□□□□□ -1.26
SCN9A-201ENST00000303354 FAIMQ9NVQ4 179 aa7.2□□□□□ -1.26
SCN9A-201ENST00000303354 PIGLQ9Y2B2 252 aa7.2□□□□□ -1.26
SCN9A-201ENST00000303354 CACNA1FO60840 1977 aa7.2□□□□□ -1.26
SCN9A-201ENST00000303354 TMEM221A6NGB7 291 aa7.2□□□□□ -1.26
SCN9A-201ENST00000303354 H3BMQ9 156 aa7.2□□□□□ -1.26
SCN9A-201ENST00000303354 M0R296 226 aa7.2□□□□□ -1.26
SCN9A-201ENST00000303354 WNT11O96014 354 aa7.2□□□□□ -1.26
SCN9A-201ENST00000303354 CTSLP07711 333 aa7.2□□□□□ -1.26
SCN9A-201ENST00000303354 ADRA1AP35348 466 aa7.2□□□□□ -1.26
SCN9A-201ENST00000303354 CSNK1G2P78368 415 aa7.2□□□□□ -1.26
SCN9A-201ENST00000303354 TAGLNQ01995 201 aaKnown RBP7.2□□□□□ -1.26
SCN9A-201ENST00000303354 MEP1BQ16820 701 aa7.2□□□□□ -1.26
SCN9A-201ENST00000303354 PYCR3Q53H96 274 aa7.2□□□□□ -1.26
SCN9A-201ENST00000303354 SOWAHCQ53LP3 525 aaPredicted RBP7.2□□□□□ -1.26
SCN9A-201ENST00000303354 BORCS7Q96B45 105 aa7.2□□□□□ -1.26
SCN9A-201ENST00000303354 HDAC8Q9BY41 377 aa7.2□□□□□ -1.26
SCN9A-201ENST00000303354 METTL9Q9H1A3 318 aa7.2□□□□□ -1.26
SCN9A-201ENST00000303354 LOC285095A0A1B0GVY8 99 aa7.2□□□□□ -1.26
SCN9A-201ENST00000303354 M0R233 179 aa7.2□□□□□ -1.26
SCN9A-201ENST00000303354 IGHEP01854 428 aa7.2□□□□□ -1.26
SCN9A-201ENST00000303354 BAXQ07812 192 aa7.2□□□□□ -1.26
SCN9A-201ENST00000303354 PHLDA2Q53GA4 152 aa7.2□□□□□ -1.26
SCN9A-201ENST00000303354 FCRLAQ7L513 359 aa7.2□□□□□ -1.26
SCN9A-201ENST00000303354 OR4A16Q8NH70 328 aa7.2□□□□□ -1.26
SCN9A-201ENST00000303354 APH1AQ96BI3 265 aa7.2□□□□□ -1.26
SCN9A-201ENST00000303354 LGALS12Q96DT0 336 aa7.2□□□□□ -1.26
SCN9A-201ENST00000303354 SEC22AQ96IW7 307 aa7.2□□□□□ -1.26
SCN9A-201ENST00000303354 PRDM6Q9NQX0 595 aa7.2□□□□□ -1.26
SCN9A-201ENST00000303354 ARFGEF2Q9Y6D5 1785 aa7.2□□□□□ -1.26
SCN9A-201ENST00000303354 OR5K3A6NET4 321 aa7.2□□□□□ -1.26
SCN9A-201ENST00000303354 ZNF891A8MT65 544 aaPredicted RBP7.2□□□□□ -1.26
SCN9A-201ENST00000303354 S100PP25815 95 aa7.2□□□□□ -1.26
SCN9A-201ENST00000303354 TNK1Q13470 666 aa7.2□□□□□ -1.26
SCN9A-201ENST00000303354 FRMPD2BQ6IN97 320 aa7.2□□□□□ -1.26
SCN9A-201ENST00000303354 OR2T27Q8NH04 317 aa7.2□□□□□ -1.26
SCN9A-201ENST00000303354 GPR148Q8TDV2 347 aa7.2□□□□□ -1.26
SCN9A-201ENST00000303354 MSANTD3Q96H12 275 aa7.2□□□□□ -1.26
SCN9A-201ENST00000303354 OR5B12Q96R08 314 aa7.2□□□□□ -1.26
SCN9A-201ENST00000303354 EPHX3Q9H6B9 360 aa7.2□□□□□ -1.26
SCN9A-201ENST00000303354 CCM2LQ9NUG4 571 aaPredicted RBP7.2□□□□□ -1.26
SCN9A-201ENST00000303354 PCDHGB6Q9Y5F9 930 aa7.2□□□□□ -1.26
SCN9A-201ENST00000303354 OR6C65A6NJZ3 312 aa7.2□□□□□ -1.26
SCN9A-201ENST00000303354 CLDN24A6NM45 220 aa7.2□□□□□ -1.26
SCN9A-201ENST00000303354 DVL1O14640 695 aa7.2□□□□□ -1.26
SCN9A-201ENST00000303354 TOX4O94842 621 aa7.2□□□□□ -1.26
SCN9A-201ENST00000303354 HMGA1P17096 107 aaKnown RBP7.2□□□□□ -1.26
SCN9A-201ENST00000303354 DVL1P1P54792 670 aaPredicted RBP7.2□□□□□ -1.26
SCN9A-201ENST00000303354 SMN1Q16637 294 aaKnown RBP7.2□□□□□ -1.26
SCN9A-201ENST00000303354 WIPI1Q5MNZ9 446 aaPredicted RBP7.2□□□□□ -1.26
SCN9A-201ENST00000303354 SYT9Q86SS6 491 aa7.2□□□□□ -1.26
SCN9A-201ENST00000303354 MUL1Q969V5 352 aa7.2□□□□□ -1.26
SCN9A-201ENST00000303354 ISOC1Q96CN7 298 aa7.2□□□□□ -1.26
SCN9A-201ENST00000303354 ZNF317Q96PQ6 595 aaPredicted RBP7.2□□□□□ -1.26
SCN9A-201ENST00000303354 TMEM100Q9NV29 134 aa7.2□□□□□ -1.26
SCN9A-201ENST00000303354 WBP1LQ9NX94 342 aa7.2□□□□□ -1.26
SCN9A-201ENST00000303354 KIF25Q9UIL4 384 aa7.2□□□□□ -1.26
SCN9A-201ENST00000303354 SLC5A6Q9Y289 635 aa7.2□□□□□ -1.26
SCN9A-201ENST00000303354 NPFFR2Q9Y5X5 522 aa7.2□□□□□ -1.26
SCN9A-201ENST00000303354 SGCEO43556 437 aa7.2□□□□□ -1.26
SCN9A-201ENST00000303354 BMP5P22003 454 aa7.2□□□□□ -1.26
SCN9A-201ENST00000303354 ELAVL4P26378 380 aaKnown RBP7.2□□□□□ -1.26
SCN9A-201ENST00000303354 ZNF83P51522 516 aa7.2□□□□□ -1.26
SCN9A-201ENST00000303354 RRAS2P62070 204 aaPredicted RBP7.2□□□□□ -1.26
SCN9A-201ENST00000303354 TMPRSS7Q7RTY8 843 aa7.2□□□□□ -1.26
SCN9A-201ENST00000303354 CCDC71LQ8N9Z2 235 aa7.2□□□□□ -1.26
SCN9A-201ENST00000303354 PLPP7Q8NBV4 271 aa7.2□□□□□ -1.26
SCN9A-201ENST00000303354 SIMC1Q8NDZ2 872 aa7.2□□□□□ -1.26
SCN9A-201ENST00000303354 PCNPQ8WW12 178 aaKnown RBP7.2□□□□□ -1.26
SCN9A-201ENST00000303354 SLCO4A1Q96BD0 722 aa7.2□□□□□ -1.26
SCN9A-201ENST00000303354 HYLS1Q96M11 299 aa7.2□□□□□ -1.26
SCN9A-201ENST00000303354 AP1S3Q96PC3 154 aa7.2□□□□□ -1.26
SCN9A-201ENST00000303354 MCRIP1C9JLW8 97 aa7.2□□□□□ -1.26
SCN9A-201ENST00000303354 H0YJX3 145 aa7.2□□□□□ -1.26
SCN9A-201ENST00000303354 GALR3O60755 368 aaPredicted RBP7.2□□□□□ -1.26
SCN9A-201ENST00000303354 ICOSLGO75144 302 aa7.2□□□□□ -1.26
SCN9A-201ENST00000303354 ITGB2P05107 769 aa7.2□□□□□ -1.26
SCN9A-201ENST00000303354 CCL2P13500 99 aa7.2□□□□□ -1.26
SCN9A-201ENST00000303354 PCGF2P35227 344 aa7.2□□□□□ -1.26
SCN9A-201ENST00000303354 GNG10P50151 68 aa7.2□□□□□ -1.26
SCN9A-201ENST00000303354 TRIP6Q15654 476 aaKnown RBP7.2□□□□□ -1.26
SCN9A-201ENST00000303354 C10orf62Q5T681 223 aaPredicted RBP7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms