RNA–Protein interactions for RNA: ENST00000302190.8

SDC2-201, Transcript of syndecan 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDC2, Length 3,759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-201ENST00000302190 THEGLP0DJG4 465 aa12.94□□□□□ -0.34
SDC2-201ENST00000302190 NID1P14543 1247 aa12.94□□□□□ -0.34
SDC2-201ENST00000302190 NPR2P20594 1047 aa12.94□□□□□ -0.34
SDC2-201ENST00000302190 OPRD1P41143 372 aa12.94□□□□□ -0.34
SDC2-201ENST00000302190 RPL35P42766 123 aaKnown RBP12.94□□□□□ -0.34
SDC2-201ENST00000302190 AGBL4Q5VU57 503 aa12.94□□□□□ -0.34
SDC2-201ENST00000302190 ZNF770Q6IQ21 691 aaPredicted RBP12.94□□□□□ -0.34
SDC2-201ENST00000302190 TDHQ8IZJ6 230 aa12.94□□□□□ -0.34
SDC2-201ENST00000302190 OR52I2Q8NH67 350 aa12.94□□□□□ -0.34
SDC2-201ENST00000302190 RSC1A1Q92681 617 aa12.94□□□□□ -0.34
SDC2-201ENST00000302190 DIO2Q92813 273 aa12.94□□□□□ -0.34
SDC2-201ENST00000302190 TMEM106AQ96A25 262 aa12.94□□□□□ -0.34
SDC2-201ENST00000302190 SDHCQ99643 169 aaPredicted RBP12.94□□□□□ -0.34
SDC2-201ENST00000302190 SLC6A7Q99884 636 aa12.94□□□□□ -0.34
SDC2-201ENST00000302190 SYT4Q9H2B2 425 aa12.94□□□□□ -0.34
SDC2-201ENST00000302190 PPA2Q9H2U2 334 aa12.94□□□□□ -0.34
SDC2-201ENST00000302190 SFXN1Q9H9B4 322 aa12.94□□□□□ -0.34
SDC2-201ENST00000302190 THAP10Q9P2Z0 257 aaPredicted RBP12.94□□□□□ -0.34
SDC2-201ENST00000302190 V9GY05 133 aa12.94□□□□□ -0.34
SDC2-201ENST00000302190 A0A1B0GTH9 108 aa12.93□□□□□ -0.34
SDC2-201ENST00000302190 TRIM77I1YAP6 450 aa12.93□□□□□ -0.34
SDC2-201ENST00000302190 PRKXP51817 358 aa12.93□□□□□ -0.34
SDC2-201ENST00000302190 NR0B1P51843 470 aaKnown RBP12.93□□□□□ -0.34
SDC2-201ENST00000302190 RPL13AP3Q6NVV1 102 aa12.93□□□□□ -0.34
SDC2-201ENST00000302190 GPR155Q7Z3F1 870 aa12.93□□□□□ -0.34
SDC2-201ENST00000302190 MORN4Q8NDC4 146 aa12.93□□□□□ -0.34
SDC2-201ENST00000302190 FBXW5Q969U6 566 aa12.93□□□□□ -0.34
SDC2-201ENST00000302190 JSRP1Q96MG2 331 aaPredicted RBP12.93□□□□□ -0.34
SDC2-201ENST00000302190 TIMM29Q9BSF4 260 aa12.93□□□□□ -0.34
SDC2-201ENST00000302190 DRD3P35462 400 aa12.93□□□□□ -0.34
SDC2-201ENST00000302190 GPR143P51810 404 aa12.93□□□□□ -0.34
SDC2-201ENST00000302190 BTG2P78543 158 aa12.93□□□□□ -0.34
SDC2-201ENST00000302190 CD163Q86VB7 1156 aa12.93□□□□□ -0.34
SDC2-201ENST00000302190 PLA2G2FQ9BZM2 168 aa12.93□□□□□ -0.34
SDC2-201ENST00000302190 IFT22Q9H7X7 185 aa12.93□□□□□ -0.34
SDC2-201ENST00000302190 BCL2L10Q9HD36 194 aa12.93□□□□□ -0.34
SDC2-201ENST00000302190 OR2S2Q9NQN1 319 aa12.93□□□□□ -0.34
SDC2-201ENST00000302190 MAN2C1Q9NTJ4 1040 aa12.93□□□□□ -0.34
SDC2-201ENST00000302190 KCND3Q9UK17 655 aa12.93□□□□□ -0.34
SDC2-201ENST00000302190 NUBP2Q9Y5Y2 271 aa12.93□□□□□ -0.34
SDC2-201ENST00000302190 H3BML4 177 aa12.93□□□□□ -0.34
SDC2-201ENST00000302190 P2RX6O15547 441 aa12.93□□□□□ -0.34
SDC2-201ENST00000302190 C1QBP02746 253 aa12.93□□□□□ -0.34
SDC2-201ENST00000302190 ITGA3P26006 1051 aa12.93□□□□□ -0.34
SDC2-201ENST00000302190 MTNR1BP49286 362 aa12.93□□□□□ -0.34
SDC2-201ENST00000302190 PPP1CAP62136 330 aa12.93□□□□□ -0.34
SDC2-201ENST00000302190 SCRN3Q0VDG4 424 aa12.93□□□□□ -0.34
SDC2-201ENST00000302190 SLC22A10Q63ZE4 541 aa12.93□□□□□ -0.34
SDC2-201ENST00000302190 LRRN1Q6UXK5 716 aa12.93□□□□□ -0.34
SDC2-201ENST00000302190 OR51D1Q8NGF3 324 aa12.93□□□□□ -0.34
SDC2-201ENST00000302190 FCRL1Q96LA6 429 aa12.93□□□□□ -0.34
SDC2-201ENST00000302190 ALG12Q9BV10 488 aa12.93□□□□□ -0.34
SDC2-201ENST00000302190 C1QTNF6Q9BXI9 259 aa12.93□□□□□ -0.34
SDC2-201ENST00000302190 KLHL21Q9UJP4 597 aa12.93□□□□□ -0.34
SDC2-201ENST00000302190 FBXL2Q9UKC9 423 aa12.93□□□□□ -0.34
SDC2-201ENST00000302190 COPS3Q9UNS2 423 aa12.93□□□□□ -0.34
SDC2-201ENST00000302190 SIRT4Q9Y6E7 314 aaPredicted RBP12.93□□□□□ -0.34
SDC2-201ENST00000302190 C2orf16Q68DN1 1984 aa12.93□□□□□ -0.34
SDC2-201ENST00000302190 AMY2AP04746 511 aa12.92□□□□□ -0.34
SDC2-201ENST00000302190 HNRNPA2B1P22626 353 aaKnown RBP12.92□□□□□ -0.34
SDC2-201ENST00000302190 ARRB1P49407 418 aaPredicted RBP12.92□□□□□ -0.34
SDC2-201ENST00000302190 ARFRP1Q13795 201 aa12.92□□□□□ -0.34
SDC2-201ENST00000302190 UBXN2BQ14CS0 331 aa12.92□□□□□ -0.34
SDC2-201ENST00000302190 FGF14Q92915 247 aa12.92□□□□□ -0.34
SDC2-201ENST00000302190 SEC22AQ96IW7 307 aa12.92□□□□□ -0.34
SDC2-201ENST00000302190 IFT46Q9NQC8 304 aa12.92□□□□□ -0.34
SDC2-201ENST00000302190 COPS7AQ9UBW8 275 aa12.92□□□□□ -0.34
SDC2-201ENST00000302190 VDAC3Q9Y277 283 aa12.92□□□□□ -0.34
SDC2-201ENST00000302190 C17orf105B2RV13 164 aa12.92□□□□□ -0.34
SDC2-201ENST00000302190 EEF1E1-BLOC1S5C9J1V9 151 aa12.92□□□□□ -0.34
SDC2-201ENST00000302190 C5orf67F2Z3F1 127 aa12.92□□□□□ -0.34
SDC2-201ENST00000302190 DPM1O60762 260 aa12.92□□□□□ -0.34
SDC2-201ENST00000302190 NSDHLQ15738 373 aa12.92□□□□□ -0.34
SDC2-201ENST00000302190 CARD17Q5XLA6 110 aa12.92□□□□□ -0.34
SDC2-201ENST00000302190 ULK3Q6PHR2 472 aa12.92□□□□□ -0.34
SDC2-201ENST00000302190 KLHDC7BQ96G42 594 aa12.92□□□□□ -0.34
SDC2-201ENST00000302190 RNF170Q96K19 258 aa12.92□□□□□ -0.34
SDC2-201ENST00000302190 FGF20Q9NP95 211 aaPredicted RBP12.92□□□□□ -0.34
SDC2-201ENST00000302190 IL20Q9NYY1 176 aa12.92□□□□□ -0.34
SDC2-201ENST00000302190 MTCL1Q9Y4B5 1905 aaKnown RBP12.92□□□□□ -0.34
SDC2-201ENST00000302190 CXCL3P19876 107 aa12.92□□□□□ -0.34
SDC2-201ENST00000302190 SPOCK1Q08629 439 aa12.92□□□□□ -0.34
SDC2-201ENST00000302190 CHAF1BQ13112 559 aa12.92□□□□□ -0.34
SDC2-201ENST00000302190 GRK1Q15835 563 aa12.92□□□□□ -0.34
SDC2-201ENST00000302190 TCTE1Q5JU00 501 aa12.92□□□□□ -0.34
SDC2-201ENST00000302190 KLHL24Q6TFL4 600 aa12.92□□□□□ -0.34
SDC2-201ENST00000302190 ZAR1Q86SH2 424 aa12.92□□□□□ -0.34
SDC2-201ENST00000302190 DUSP19Q8WTR2 217 aa12.92□□□□□ -0.34
SDC2-201ENST00000302190 RNF32Q9H0A6 362 aa12.92□□□□□ -0.34
SDC2-201ENST00000302190 CD93Q9NPY3 652 aa12.92□□□□□ -0.34
SDC2-201ENST00000302190 LHX9Q9NQ69 397 aa12.92□□□□□ -0.34
SDC2-201ENST00000302190 GSKIPQ9P0R6 139 aa12.92□□□□□ -0.34
SDC2-201ENST00000302190 DHCR7Q9UBM7 475 aaKnown RBP12.92□□□□□ -0.34
SDC2-201ENST00000302190 DOCK8Q8NF50 2099 aa12.91□□□□□ -0.34
SDC2-201ENST00000302190 TMEM229AB2RXF0 380 aa12.91□□□□□ -0.34
SDC2-201ENST00000302190 SLC16A7O60669 478 aa12.91□□□□□ -0.34
SDC2-201ENST00000302190 ATF1P18846 271 aa12.91□□□□□ -0.34
SDC2-201ENST00000302190 TBXA2RP21731 343 aa12.91□□□□□ -0.34
SDC2-201ENST00000302190 EMDP50402 254 aa12.91□□□□□ -0.34
SDC2-201ENST00000302190 ADPRHP54922 357 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms