RNA–Protein interactions for RNA: ENST00000302085.8

SMAD1-201, Transcript of SMAD family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD1, Length 1,966 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-201ENST00000302085 EMC4Q5J8M3 183 aa20.14■□□□□ 0.81
SMAD1-201ENST00000302085 C5orf46Q6UWT4 87 aa20.14■□□□□ 0.81
SMAD1-201ENST00000302085 PIP4P1Q86T03 277 aa20.14■□□□□ 0.81
SMAD1-201ENST00000302085 JAZF1Q86VZ6 243 aa20.14■□□□□ 0.81
SMAD1-201ENST00000302085 KLBQ86Z14 1044 aa20.14■□□□□ 0.81
SMAD1-201ENST00000302085 EXD3Q8N9H8 876 aa20.14■□□□□ 0.81
SMAD1-201ENST00000302085 OR2M3Q8NG83 312 aa20.14■□□□□ 0.81
SMAD1-201ENST00000302085 SSR3Q9UNL2 185 aa20.14■□□□□ 0.81
SMAD1-201ENST00000302085 CPAMD8Q8IZJ3 1885 aa20.14■□□□□ 0.81
SMAD1-201ENST00000302085 SDK2Q58EX2 2172 aa20.14■□□□□ 0.81
SMAD1-201ENST00000302085 A0A1W2PQL4 384 aaPredicted RBP20.14■□□□□ 0.81
SMAD1-201ENST00000302085 HCCSP53701 268 aa20.14■□□□□ 0.81
SMAD1-201ENST00000302085 EIF3IQ13347 325 aaKnown RBP20.14■□□□□ 0.81
SMAD1-201ENST00000302085 SLC25A53Q5H9E4 307 aa20.14■□□□□ 0.81
SMAD1-201ENST00000302085 SLC35D3Q5M8T2 416 aa20.14■□□□□ 0.81
SMAD1-201ENST00000302085 ARMC10Q8N2F6 343 aa20.14■□□□□ 0.81
SMAD1-201ENST00000302085 WDSUB1Q8N9V3 476 aa20.14■□□□□ 0.81
SMAD1-201ENST00000302085 OR6Q1Q8NGQ2 317 aa20.14■□□□□ 0.81
SMAD1-201ENST00000302085 POC1BQ8TC44 478 aa20.14■□□□□ 0.81
SMAD1-201ENST00000302085 ASB15Q8WXK1 588 aa20.14■□□□□ 0.81
SMAD1-201ENST00000302085 NDEL1Q9GZM8 345 aa20.14■□□□□ 0.81
SMAD1-201ENST00000302085 BABAM2Q9NXR7 383 aa20.14■□□□□ 0.81
SMAD1-201ENST00000302085 FBXL2Q9UKC9 423 aa20.14■□□□□ 0.81
SMAD1-201ENST00000302085 METTL15A6NJ78 407 aa20.13■□□□□ 0.81
SMAD1-201ENST00000302085 FTCDNL1E5RQL4 147 aa20.13■□□□□ 0.81
SMAD1-201ENST00000302085 C11orf98E9PRG8 122 aa20.13■□□□□ 0.81
SMAD1-201ENST00000302085 OR2T1O43869 369 aa20.13■□□□□ 0.81
SMAD1-201ENST00000302085 TFP02787 698 aa20.13■□□□□ 0.81
SMAD1-201ENST00000302085 IL11P20809 199 aa20.13■□□□□ 0.81
SMAD1-201ENST00000302085 SSR4P51571 173 aa20.13■□□□□ 0.81
SMAD1-201ENST00000302085 ZNF41P51814 821 aaPredicted RBP20.13■□□□□ 0.81
SMAD1-201ENST00000302085 SLC25A1P53007 311 aa20.13■□□□□ 0.81
SMAD1-201ENST00000302085 IL10RAQ13651 578 aa20.13■□□□□ 0.81
SMAD1-201ENST00000302085 PLPPR5Q32ZL2 321 aa20.13■□□□□ 0.81
SMAD1-201ENST00000302085 MESTQ5EB52 335 aa20.13■□□□□ 0.81
SMAD1-201ENST00000302085 TMEM164Q5U3C3 297 aa20.13■□□□□ 0.81
SMAD1-201ENST00000302085 PRAMEF20Q5VT98 475 aa20.13■□□□□ 0.81
SMAD1-201ENST00000302085 FRMD6Q96NE9 622 aa20.13■□□□□ 0.81
SMAD1-201ENST00000302085 CDADC1Q9BWV3 514 aa20.13■□□□□ 0.81
SMAD1-201ENST00000302085 RPRD1BQ9NQG5 326 aaKnown RBP20.13■□□□□ 0.81
SMAD1-201ENST00000302085 PCNX2A6NKB5 2137 aa20.12■□□□□ 0.81
SMAD1-201ENST00000302085 PLPP3O14495 311 aa20.12■□□□□ 0.81
SMAD1-201ENST00000302085 AKAP8O43823 692 aaKnown RBP20.12■□□□□ 0.81
SMAD1-201ENST00000302085 F8A1P23610 371 aa20.12■□□□□ 0.81
SMAD1-201ENST00000302085 RPS15P62841 145 aaKnown RBP20.12■□□□□ 0.81
SMAD1-201ENST00000302085 SNTA1Q13424 505 aa20.12■□□□□ 0.81
SMAD1-201ENST00000302085 KRR1Q13601 381 aaKnown RBP20.12■□□□□ 0.81
SMAD1-201ENST00000302085 ZNF829Q3KNS6 432 aaPredicted RBP20.12■□□□□ 0.81
SMAD1-201ENST00000302085 LINC01590Q5TEZ4 76 aa20.12■□□□□ 0.81
SMAD1-201ENST00000302085 LCN1P1Q5VSP4 162 aa20.12■□□□□ 0.81
SMAD1-201ENST00000302085 SLC6A19Q695T7 634 aa20.12■□□□□ 0.81
SMAD1-201ENST00000302085 GPR139Q6DWJ6 353 aa20.12■□□□□ 0.81
SMAD1-201ENST00000302085 LINC00299Q6ZSB3 139 aa20.12■□□□□ 0.81
SMAD1-201ENST00000302085 FADS6Q8N9I5 356 aa20.12■□□□□ 0.81
SMAD1-201ENST00000302085 OR6S1Q8NH40 331 aa20.12■□□□□ 0.81
SMAD1-201ENST00000302085 MCFD2Q8NI22 146 aa20.12■□□□□ 0.81
SMAD1-201ENST00000302085 ARL5BQ96KC2 179 aa20.12■□□□□ 0.81
SMAD1-201ENST00000302085 TM9SF2Q99805 663 aa20.12■□□□□ 0.81
SMAD1-201ENST00000302085 INIPQ9NRY2 104 aa20.12■□□□□ 0.81
SMAD1-201ENST00000302085 TXNL4BQ9NX01 149 aaKnown RBP20.12■□□□□ 0.81
SMAD1-201ENST00000302085 CCDC59Q9P031 241 aaKnown RBP20.12■□□□□ 0.81
SMAD1-201ENST00000302085 SIRT4Q9Y6E7 314 aaPredicted RBP20.12■□□□□ 0.81
SMAD1-201ENST00000302085 FAM171A2A8MVW0 826 aa20.12■□□□□ 0.81
SMAD1-201ENST00000302085 PRR33A8MZF0 331 aa20.12■□□□□ 0.81
SMAD1-201ENST00000302085 ZNF208O43345 1280 aa20.12■□□□□ 0.81
SMAD1-201ENST00000302085 TGM1P22735 817 aa20.12■□□□□ 0.81
SMAD1-201ENST00000302085 PYCR1P32322 319 aa20.12■□□□□ 0.81
SMAD1-201ENST00000302085 SSX6Q7RTT6 188 aa20.12■□□□□ 0.81
SMAD1-201ENST00000302085 ESX1Q8N693 406 aa20.12■□□□□ 0.81
SMAD1-201ENST00000302085 POMGNT2Q8NAT1 580 aa20.12■□□□□ 0.81
SMAD1-201ENST00000302085 ATP6V1C2Q8NEY4 427 aa20.12■□□□□ 0.81
SMAD1-201ENST00000302085 C1GALT1C1Q96EU7 318 aa20.12■□□□□ 0.81
SMAD1-201ENST00000302085 MRGPRX4Q96LA9 322 aa20.12■□□□□ 0.81
SMAD1-201ENST00000302085 TSSK2Q96PF2 358 aa20.12■□□□□ 0.81
SMAD1-201ENST00000302085 CNN2Q99439 309 aaKnown RBP20.12■□□□□ 0.81
SMAD1-201ENST00000302085 NXF2Q9GZY0 626 aaKnown RBP20.12■□□□□ 0.81
SMAD1-201ENST00000302085 GLCEO94923 617 aa20.11■□□□□ 0.81
SMAD1-201ENST00000302085 HPP00738 406 aa20.11■□□□□ 0.81
SMAD1-201ENST00000302085 CELP19835 753 aa20.11■□□□□ 0.81
SMAD1-201ENST00000302085 GABRA5P31644 462 aa20.11■□□□□ 0.81
SMAD1-201ENST00000302085 RPS19P39019 145 aaKnown RBP20.11■□□□□ 0.81
SMAD1-201ENST00000302085 ACTC1P68032 377 aa20.11■□□□□ 0.81
SMAD1-201ENST00000302085 ACTA1P68133 377 aa20.11■□□□□ 0.81
SMAD1-201ENST00000302085 FOXK1P85037 733 aa20.11■□□□□ 0.81
SMAD1-201ENST00000302085 DNASE1L3Q13609 305 aa20.11■□□□□ 0.81
SMAD1-201ENST00000302085 ZNF404Q494X3 552 aa20.11■□□□□ 0.81
SMAD1-201ENST00000302085 TMEM81Q6P7N7 255 aa20.11■□□□□ 0.81
SMAD1-201ENST00000302085 RFLNBQ8N5W9 214 aa20.11■□□□□ 0.81
SMAD1-201ENST00000302085 ZNF417Q8TAU3 575 aa20.11■□□□□ 0.81
SMAD1-201ENST00000302085 NTNG2Q96CW9 530 aa20.11■□□□□ 0.81
SMAD1-201ENST00000302085 ZNF587Q96SQ5 575 aaPredicted RBP20.11■□□□□ 0.81
SMAD1-201ENST00000302085 SH2D2AQ9NP31 389 aa20.11■□□□□ 0.81
SMAD1-201ENST00000302085 MRPL39Q9NYK5 338 aaKnown RBP20.11■□□□□ 0.81
SMAD1-201ENST00000302085 ZMIZ1Q9ULJ6 1067 aa20.11■□□□□ 0.81
SMAD1-201ENST00000302085 CORINQ9Y5Q5 1042 aa20.11■□□□□ 0.81
SMAD1-201ENST00000302085 PCSK5Q92824 1860 aa20.11■□□□□ 0.81
SMAD1-201ENST00000302085 ZNF670-ZNF695F2Z2N8 137 aa20.1■□□□□ 0.81
SMAD1-201ENST00000302085 H7C1C5 153 aa20.1■□□□□ 0.81
SMAD1-201ENST00000302085 RNF13O43567 381 aa20.1■□□□□ 0.81
SMAD1-201ENST00000302085 CCL3P10147 92 aa20.1■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms