RNA–Protein interactions for RNA: ENST00000300862.7

HIF3A-204, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene HIF3A, Length 2,551 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-204ENST00000300862 TEX13CA0A0J9YWL9 993 aa11.79□□□□□ -0.52
HIF3A-204ENST00000300862 A8MUA0 341 aa11.79□□□□□ -0.52
HIF3A-204ENST00000300862 I3L521 148 aa11.79□□□□□ -0.52
HIF3A-204ENST00000300862 RPP14O95059 124 aaKnown RBP11.79□□□□□ -0.52
HIF3A-204ENST00000300862 MT-ND4P03905 459 aa11.79□□□□□ -0.52
HIF3A-204ENST00000300862 ANKRD34CP0C6C1 535 aa11.79□□□□□ -0.52
HIF3A-204ENST00000300862 DIO1P49895 249 aa11.79□□□□□ -0.52
HIF3A-204ENST00000300862 CD226Q15762 336 aa11.79□□□□□ -0.52
HIF3A-204ENST00000300862 PXDC1Q5TGL8 231 aa11.79□□□□□ -0.52
HIF3A-204ENST00000300862 CBLN3Q6UW01 205 aa11.79□□□□□ -0.52
HIF3A-204ENST00000300862 SERPINA12Q8IW75 414 aa11.79□□□□□ -0.52
HIF3A-204ENST00000300862 ZNF433Q8N7K0 673 aaPredicted RBP11.79□□□□□ -0.52
HIF3A-204ENST00000300862 LGALS14Q8TCE9 139 aa11.79□□□□□ -0.52
HIF3A-204ENST00000300862 PCNPQ8WW12 178 aaKnown RBP11.79□□□□□ -0.52
HIF3A-204ENST00000300862 C3orf49Q96BT1 292 aa11.79□□□□□ -0.52
HIF3A-204ENST00000300862 MED28Q9H204 178 aa11.79□□□□□ -0.52
HIF3A-204ENST00000300862 AUNIPQ9H7T9 357 aa11.79□□□□□ -0.52
HIF3A-204ENST00000300862 IGKV1D-42A0A075B6H8 117 aa11.78□□□□□ -0.52
HIF3A-204ENST00000300862 C7orf66A4D0T2 115 aa11.78□□□□□ -0.52
HIF3A-204ENST00000300862 PIN1P1O15428 100 aa11.78□□□□□ -0.52
HIF3A-204ENST00000300862 PRAMEF2O60811 474 aa11.78□□□□□ -0.52
HIF3A-204ENST00000300862 RAF1P04049 648 aa11.78□□□□□ -0.52
HIF3A-204ENST00000300862 TPOP07202 933 aa11.78□□□□□ -0.52
HIF3A-204ENST00000300862 CDKN2AP42771 156 aaKnown RBP11.78□□□□□ -0.52
HIF3A-204ENST00000300862 GPR143P51810 404 aa11.78□□□□□ -0.52
HIF3A-204ENST00000300862 NANOS3P60323 173 aaKnown RBP11.78□□□□□ -0.52
HIF3A-204ENST00000300862 POU4F3Q15319 338 aa11.78□□□□□ -0.52
HIF3A-204ENST00000300862 OTPQ5XKR4 325 aa11.78□□□□□ -0.52
HIF3A-204ENST00000300862 LEG1Q6P5S2 330 aa11.78□□□□□ -0.52
HIF3A-204ENST00000300862 OR14A16Q8NHC5 309 aa11.78□□□□□ -0.52
HIF3A-204ENST00000300862 MOGAT1Q96PD6 335 aa11.78□□□□□ -0.52
HIF3A-204ENST00000300862 LRRC61Q9BV99 259 aa11.78□□□□□ -0.52
HIF3A-204ENST00000300862 GHITMQ9H3K2 345 aa11.78□□□□□ -0.52
HIF3A-204ENST00000300862 MSRAQ9UJ68 235 aa11.78□□□□□ -0.52
HIF3A-204ENST00000300862 ZNF222Q9UK12 451 aa11.78□□□□□ -0.52
HIF3A-204ENST00000300862 NPFFR2Q9Y5X5 522 aa11.78□□□□□ -0.52
HIF3A-204ENST00000300862 RPS10-NUDT3A0A1W2PQS6 291 aa11.78□□□□□ -0.52
HIF3A-204ENST00000300862 OR5K4A6NMS3 321 aa11.78□□□□□ -0.52
HIF3A-204ENST00000300862 C17orf51A8MQB3 221 aa11.78□□□□□ -0.52
HIF3A-204ENST00000300862 H7C1C5 153 aa11.78□□□□□ -0.52
HIF3A-204ENST00000300862 OR7A10O76100 309 aa11.78□□□□□ -0.52
HIF3A-204ENST00000300862 TCRBP04435 133 aa11.78□□□□□ -0.52
HIF3A-204ENST00000300862 F13BP05160 661 aa11.78□□□□□ -0.52
HIF3A-204ENST00000300862 CXCL3P19876 107 aa11.78□□□□□ -0.52
HIF3A-204ENST00000300862 LCN6P62502 163 aa11.78□□□□□ -0.52
HIF3A-204ENST00000300862 ACTA2P62736 377 aa11.78□□□□□ -0.52
HIF3A-204ENST00000300862 ACTG2P63267 376 aa11.78□□□□□ -0.52
HIF3A-204ENST00000300862 IKZF1Q13422 519 aa11.78□□□□□ -0.52
HIF3A-204ENST00000300862 TMEM65Q6PI78 240 aa11.78□□□□□ -0.52
HIF3A-204ENST00000300862 DPY19L2P2Q6ZN68 376 aa11.78□□□□□ -0.52
HIF3A-204ENST00000300862 OR51Q1Q8NH59 317 aa11.78□□□□□ -0.52
HIF3A-204ENST00000300862 DACT3Q96B18 629 aaPredicted RBP11.78□□□□□ -0.52
HIF3A-204ENST00000300862 SCMH1Q96GD3 660 aa11.78□□□□□ -0.52
HIF3A-204ENST00000300862 MS4A3Q96HJ5 214 aa11.78□□□□□ -0.52
HIF3A-204ENST00000300862 G6PC3Q9BUM1 346 aa11.78□□□□□ -0.52
HIF3A-204ENST00000300862 TSPAN10Q9H1Z9 355 aaPredicted RBP11.78□□□□□ -0.52
HIF3A-204ENST00000300862 MMP17Q9ULZ9 603 aa11.78□□□□□ -0.52
HIF3A-204ENST00000300862 ASXL3Q9C0F0 2248 aa11.78□□□□□ -0.52
HIF3A-204ENST00000300862 PCDH15Q96QU1 1955 aa11.78□□□□□ -0.52
HIF3A-204ENST00000300862 RP1P56715 2156 aa11.78□□□□□ -0.52
HIF3A-204ENST00000300862 TRAV1-2A0A0B4J238 106 aa11.77□□□□□ -0.52
HIF3A-204ENST00000300862 CLDN4O14493 209 aa11.77□□□□□ -0.52
HIF3A-204ENST00000300862 UCHL1P09936 223 aa11.77□□□□□ -0.52
HIF3A-204ENST00000300862 RPS27P42677 84 aaKnown RBP11.77□□□□□ -0.52
HIF3A-204ENST00000300862 MFSD13AQ14CX5 517 aa11.77□□□□□ -0.52
HIF3A-204ENST00000300862 HSD17B12Q53GQ0 312 aa11.77□□□□□ -0.52
HIF3A-204ENST00000300862 STPG1Q5TH74 334 aa11.77□□□□□ -0.52
HIF3A-204ENST00000300862 KIAA0895LQ68EN5 471 aa11.77□□□□□ -0.52
HIF3A-204ENST00000300862 BICRALQ6AI39 1079 aa11.77□□□□□ -0.52
HIF3A-204ENST00000300862 MED25Q71SY5 747 aa11.77□□□□□ -0.52
HIF3A-204ENST00000300862 TEX19Q8NA77 164 aa11.77□□□□□ -0.52
HIF3A-204ENST00000300862 POMGNT2Q8NAT1 580 aa11.77□□□□□ -0.52
HIF3A-204ENST00000300862 DDOQ99489 341 aa11.77□□□□□ -0.52
HIF3A-204ENST00000300862 GFI1Q99684 422 aa11.77□□□□□ -0.52
HIF3A-204ENST00000300862 CACNG6Q9BXT2 260 aa11.77□□□□□ -0.52
HIF3A-204ENST00000300862 NRIP3Q9NQ35 241 aa11.77□□□□□ -0.52
HIF3A-204ENST00000300862 NKIRAS2Q9NYR9 191 aa11.77□□□□□ -0.52
HIF3A-204ENST00000300862 ING4Q9UNL4 249 aa11.77□□□□□ -0.52
HIF3A-204ENST00000300862 MRPS33Q9Y291 106 aaKnown RBP11.77□□□□□ -0.52
HIF3A-204ENST00000300862 A0A1B0GTH9 108 aa11.77□□□□□ -0.53
HIF3A-204ENST00000300862 ARL6IP5O75915 188 aa11.77□□□□□ -0.53
HIF3A-204ENST00000300862 ZFPL1O95159 310 aa11.77□□□□□ -0.53
HIF3A-204ENST00000300862 UBL3O95164 117 aa11.77□□□□□ -0.53
HIF3A-204ENST00000300862 SERPINA3P01011 423 aa11.77□□□□□ -0.53
HIF3A-204ENST00000300862 WNT1P04628 370 aa11.77□□□□□ -0.53
HIF3A-204ENST00000300862 PTHLHP12272 177 aa11.77□□□□□ -0.53
HIF3A-204ENST00000300862 GFERP55789 205 aa11.77□□□□□ -0.53
HIF3A-204ENST00000300862 LGALS3BPQ08380 585 aa11.77□□□□□ -0.53
HIF3A-204ENST00000300862 RPL22L1Q6P5R6 122 aaKnown RBP11.77□□□□□ -0.53
HIF3A-204ENST00000300862 POMZP3Q6PJE2 187 aa11.77□□□□□ -0.53
HIF3A-204ENST00000300862 APOOLQ6UXV4 268 aa11.77□□□□□ -0.53
HIF3A-204ENST00000300862 PRR22Q8IZ63 422 aa11.77□□□□□ -0.53
HIF3A-204ENST00000300862 CMTM4Q8IZR5 234 aa11.77□□□□□ -0.53
HIF3A-204ENST00000300862 SYS1Q8N2H4 156 aa11.77□□□□□ -0.53
HIF3A-204ENST00000300862 PHOSPHO1Q8TCT1 267 aa11.77□□□□□ -0.53
HIF3A-204ENST00000300862 DPAGT1Q9H3H5 408 aa11.77□□□□□ -0.53
HIF3A-204ENST00000300862 SYNDIG1Q9H7V2 258 aa11.77□□□□□ -0.53
HIF3A-204ENST00000300862 FKRPQ9H9S5 495 aa11.77□□□□□ -0.53
HIF3A-204ENST00000300862 SRA1Q9HD15 236 aaKnown RBP11.77□□□□□ -0.53
HIF3A-204ENST00000300862 EMC7Q9NPA0 242 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms