RNA–Protein interactions for RNA: ENST00000297261.6

SHH-201, Transcript of sonic hedgehog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHH, Length 4,454 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHH-201ENST00000297261 ADRB1P08588 477 aa14.21□□□□□ -0.13
SHH-201ENST00000297261 ACSM4P0C7M7 580 aa14.21□□□□□ -0.13
SHH-201ENST00000297261 CISD3P0C7P0 127 aa14.21□□□□□ -0.13
SHH-201ENST00000297261 AKR1C8PQ5T2L2 129 aa14.21□□□□□ -0.13
SHH-201ENST00000297261 MRPL2Q5T653 305 aaKnown RBP14.21□□□□□ -0.13
SHH-201ENST00000297261 CHRDL2Q6WN34 429 aa14.21□□□□□ -0.13
SHH-201ENST00000297261 NDUFAF7Q7L592 441 aa14.21□□□□□ -0.13
SHH-201ENST00000297261 OR13C5Q8NGS8 318 aa14.21□□□□□ -0.13
SHH-201ENST00000297261 APH1BQ8WW43 257 aa14.21□□□□□ -0.13
SHH-201ENST00000297261 RSPRY1Q96DX4 576 aa14.21□□□□□ -0.13
SHH-201ENST00000297261 C19orf43Q9BQ61 176 aa14.21□□□□□ -0.13
SHH-201ENST00000297261 NKX6-2Q9C056 277 aaPredicted RBP14.21□□□□□ -0.13
SHH-201ENST00000297261 EPHX3Q9H6B9 360 aa14.21□□□□□ -0.13
SHH-201ENST00000297261 ACKR4Q9NPB9 350 aa14.21□□□□□ -0.13
SHH-201ENST00000297261 ANKRD61A6NGH8 418 aa14.21□□□□□ -0.14
SHH-201ENST00000297261 PRSS44E7EML9 344 aa14.21□□□□□ -0.14
SHH-201ENST00000297261 SULT1C2O00338 296 aa14.21□□□□□ -0.14
SHH-201ENST00000297261 MPIG6BO95866 241 aa14.21□□□□□ -0.14
SHH-201ENST00000297261 SLC2A5P22732 501 aa14.21□□□□□ -0.14
SHH-201ENST00000297261 BDKRB2P30411 391 aa14.21□□□□□ -0.14
SHH-201ENST00000297261 CRYBB2P43320 205 aa14.21□□□□□ -0.14
SHH-201ENST00000297261 TAS2R19P59542 299 aa14.21□□□□□ -0.14
SHH-201ENST00000297261 FOXK2Q01167 660 aa14.21□□□□□ -0.14
SHH-201ENST00000297261 IFITM2Q01629 132 aa14.21□□□□□ -0.14
SHH-201ENST00000297261 BCL2A1Q16548 175 aa14.21□□□□□ -0.14
SHH-201ENST00000297261 PAN3Q58A45 887 aaKnown RBP14.21□□□□□ -0.14
SHH-201ENST00000297261 ALG10Q5BKT4 473 aa14.21□□□□□ -0.14
SHH-201ENST00000297261 FAM74A1Q5RGS3 127 aa14.21□□□□□ -0.14
SHH-201ENST00000297261 CDRT4Q8N9R6 151 aa14.21□□□□□ -0.14
SHH-201ENST00000297261 WDSUB1Q8N9V3 476 aa14.21□□□□□ -0.14
SHH-201ENST00000297261 ST7LQ8TDW4 575 aa14.21□□□□□ -0.14
SHH-201ENST00000297261 KLHL15Q96M94 604 aa14.21□□□□□ -0.14
SHH-201ENST00000297261 URM1Q9BTM9 101 aaKnown RBP14.21□□□□□ -0.14
SHH-201ENST00000297261 WSB2Q9NYS7 404 aaPredicted RBP14.21□□□□□ -0.14
SHH-201ENST00000297261 ZNF443Q9Y2A4 671 aaPredicted RBP14.21□□□□□ -0.14
SHH-201ENST00000297261 PPIL1Q9Y3C6 166 aa14.21□□□□□ -0.14
SHH-201ENST00000297261 CXorf51AA0A1B0GTR3 108 aa14.2□□□□□ -0.14
SHH-201ENST00000297261 TSPAN11A1L157 253 aa14.2□□□□□ -0.14
SHH-201ENST00000297261 HOXB5P09067 269 aa14.2□□□□□ -0.14
SHH-201ENST00000297261 OPRD1P41143 372 aa14.2□□□□□ -0.14
SHH-201ENST00000297261 ARF3P61204 181 aaPredicted RBP14.2□□□□□ -0.14
SHH-201ENST00000297261 HERV-K104P61576 105 aa14.2□□□□□ -0.14
SHH-201ENST00000297261 ARF1P84077 181 aaKnown RBP14.2□□□□□ -0.14
SHH-201ENST00000297261 INSL4Q14641 139 aa14.2□□□□□ -0.14
SHH-201ENST00000297261 GNMTQ14749 295 aa14.2□□□□□ -0.14
SHH-201ENST00000297261 CMIPQ8IY22 773 aa14.2□□□□□ -0.14
SHH-201ENST00000297261 BBS1Q8NFJ9 593 aa14.2□□□□□ -0.14
SHH-201ENST00000297261 OR51D1Q8NGF3 324 aa14.2□□□□□ -0.14
SHH-201ENST00000297261 LMX1AQ8TE12 382 aa14.2□□□□□ -0.14
SHH-201ENST00000297261 UPRTQ96BW1 309 aa14.2□□□□□ -0.14
SHH-201ENST00000297261 KCMF1Q9P0J7 381 aa14.2□□□□□ -0.14
SHH-201ENST00000297261 HSPA12AO43301 675 aa14.2□□□□□ -0.14
SHH-201ENST00000297261 MED6O75586 246 aa14.2□□□□□ -0.14
SHH-201ENST00000297261 DEFA6Q01524 100 aa14.2□□□□□ -0.14
SHH-201ENST00000297261 FLI1Q01543 452 aaPredicted RBP14.2□□□□□ -0.14
SHH-201ENST00000297261 SPOCK1Q08629 439 aa14.2□□□□□ -0.14
SHH-201ENST00000297261 ADAMTSL4Q6UY14 1074 aa14.2□□□□□ -0.14
SHH-201ENST00000297261 ZNF619Q8N2I2 560 aa14.2□□□□□ -0.14
SHH-201ENST00000297261 ZNF283Q8N7M2 679 aa14.2□□□□□ -0.14
SHH-201ENST00000297261 OR52E1Q8NGJ3 308 aa14.2□□□□□ -0.14
SHH-201ENST00000297261 MARC2Q969Z3 335 aa14.2□□□□□ -0.14
SHH-201ENST00000297261 ARSGQ96EG1 525 aa14.2□□□□□ -0.14
SHH-201ENST00000297261 PTCHD1Q96NR3 888 aa14.2□□□□□ -0.14
SHH-201ENST00000297261 INSM2Q96T92 566 aaPredicted RBP14.2□□□□□ -0.14
SHH-201ENST00000297261 RNF32Q9H0A6 362 aa14.2□□□□□ -0.14
SHH-201ENST00000297261 A4GALTQ9NPC4 353 aa14.2□□□□□ -0.14
SHH-201ENST00000297261 SPATA6Q9NWH7 488 aaPredicted RBP14.2□□□□□ -0.14
SHH-201ENST00000297261 AK1P00568 194 aa14.2□□□□□ -0.14
SHH-201ENST00000297261 GLP1RP43220 463 aa14.2□□□□□ -0.14
SHH-201ENST00000297261 EXOSC7Q15024 291 aaKnown RBP14.2□□□□□ -0.14
SHH-201ENST00000297261 C1orf94Q6P1W5 598 aa14.2□□□□□ -0.14
SHH-201ENST00000297261 TTLL10Q6ZVT0 673 aa14.2□□□□□ -0.14
SHH-201ENST00000297261 MBOAT2Q6ZWT7 520 aa14.2□□□□□ -0.14
SHH-201ENST00000297261 GPAT4Q86UL3 456 aa14.2□□□□□ -0.14
SHH-201ENST00000297261 TM4SF18Q96CE8 201 aa14.2□□□□□ -0.14
SHH-201ENST00000297261 TCEAL7Q9BRU2 100 aa14.2□□□□□ -0.14
SHH-201ENST00000297261 G6PC3Q9BUM1 346 aa14.2□□□□□ -0.14
SHH-201ENST00000297261 TAAR2Q9P1P5 351 aa14.2□□□□□ -0.14
SHH-201ENST00000297261 PCM1Q15154 2024 aa14.2□□□□□ -0.14
SHH-201ENST00000297261 MEGF11A6BM72 1044 aa14.19□□□□□ -0.14
SHH-201ENST00000297261 A8MVJ9 347 aa14.19□□□□□ -0.14
SHH-201ENST00000297261 M0QYG6 137 aa14.19□□□□□ -0.14
SHH-201ENST00000297261 SRPX2O60687 465 aaPredicted RBP14.19□□□□□ -0.14
SHH-201ENST00000297261 CLEC3AO75596 197 aa14.19□□□□□ -0.14
SHH-201ENST00000297261 PXNP49023 591 aaPredicted RBP14.19□□□□□ -0.14
SHH-201ENST00000297261 VASPP50552 380 aaPredicted RBP14.19□□□□□ -0.14
SHH-201ENST00000297261 PDZK1IP1Q13113 114 aa14.19□□□□□ -0.14
SHH-201ENST00000297261 PDE7AQ13946 482 aa14.19□□□□□ -0.14
SHH-201ENST00000297261 NFATC4Q14934 902 aa14.19□□□□□ -0.14
SHH-201ENST00000297261 LTB4RQ15722 352 aa14.19□□□□□ -0.14
SHH-201ENST00000297261 SLC18B1Q6NT16 456 aa14.19□□□□□ -0.14
SHH-201ENST00000297261 ZNF761Q86XN6 746 aaPredicted RBP14.19□□□□□ -0.14
SHH-201ENST00000297261 OR51S1Q8NGJ8 323 aa14.19□□□□□ -0.14
SHH-201ENST00000297261 OR5H2Q8NGV7 314 aa14.19□□□□□ -0.14
SHH-201ENST00000297261 OR14K1Q8NGZ2 314 aa14.19□□□□□ -0.14
SHH-201ENST00000297261 STK35Q8TDR2 534 aa14.19□□□□□ -0.14
SHH-201ENST00000297261 C3orf49Q96BT1 292 aa14.19□□□□□ -0.14
SHH-201ENST00000297261 ZNF587Q96SQ5 575 aaPredicted RBP14.19□□□□□ -0.14
SHH-201ENST00000297261 ARHGAP9Q9BRR9 750 aa14.19□□□□□ -0.14
SHH-201ENST00000297261 THSD7BQ9C0I4 1608 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms