RNA–Protein interactions for RNA: ENST00000295226.1

CCDC140-201, Transcript of coiled-coil domain containing 140, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC140, Length 1,699 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC140-201ENST00000295226 GJE1A6NN92 205 aa13.57□□□□□ -0.24
CCDC140-201ENST00000295226 KDM4EB2RXH2 506 aaPredicted RBP13.57□□□□□ -0.24
CCDC140-201ENST00000295226 BCKDKO14874 412 aa13.57□□□□□ -0.24
CCDC140-201ENST00000295226 KLF4O43474 513 aa13.57□□□□□ -0.24
CCDC140-201ENST00000295226 RAMP1O60894 148 aa13.57□□□□□ -0.24
CCDC140-201ENST00000295226 CDH15P55291 814 aa13.57□□□□□ -0.24
CCDC140-201ENST00000295226 CXCR4P61073 352 aa13.57□□□□□ -0.24
CCDC140-201ENST00000295226 C6orf141Q5SZD1 244 aa13.57□□□□□ -0.24
CCDC140-201ENST00000295226 FAHD1Q6P587 224 aa13.57□□□□□ -0.24
CCDC140-201ENST00000295226 ESPNLQ6ZVH7 1005 aa13.57□□□□□ -0.24
CCDC140-201ENST00000295226 TMPRSS11FQ6ZWK6 438 aa13.57□□□□□ -0.24
CCDC140-201ENST00000295226 CCDC103Q8IW40 242 aa13.57□□□□□ -0.24
CCDC140-201ENST00000295226 MEIOBQ8N635 442 aa13.57□□□□□ -0.24
CCDC140-201ENST00000295226 MFSD8Q8NHS3 518 aa13.57□□□□□ -0.24
CCDC140-201ENST00000295226 FBLIM1Q8WUP2 373 aa13.57□□□□□ -0.24
CCDC140-201ENST00000295226 ROBO4Q8WZ75 1007 aa13.57□□□□□ -0.24
CCDC140-201ENST00000295226 ZNF566Q969W8 418 aa13.57□□□□□ -0.24
CCDC140-201ENST00000295226 MIB2Q96AX9 1013 aa13.57□□□□□ -0.24
CCDC140-201ENST00000295226 TNFRSF13CQ96RJ3 184 aa13.57□□□□□ -0.24
CCDC140-201ENST00000295226 UCN2Q96RP3 112 aa13.57□□□□□ -0.24
CCDC140-201ENST00000295226 ENKD1Q9H0I2 346 aa13.57□□□□□ -0.24
CCDC140-201ENST00000295226 NANSQ9NR45 359 aa13.57□□□□□ -0.24
CCDC140-201ENST00000295226 KIF17Q9P2E2 1029 aa13.57□□□□□ -0.24
CCDC140-201ENST00000295226 IL20RAQ9UHF4 553 aa13.57□□□□□ -0.24
CCDC140-201ENST00000295226 RALYQ9UKM9 306 aaKnown RBP13.57□□□□□ -0.24
CCDC140-201ENST00000295226 MGAT4BQ9UQ53 548 aa13.57□□□□□ -0.24
CCDC140-201ENST00000295226 SHANK1Q9Y566 2161 aa13.57□□□□□ -0.24
CCDC140-201ENST00000295226 RP1L1Q8IWN7 2480 aaPredicted RBP13.57□□□□□ -0.24
CCDC140-201ENST00000295226 BLOC1S5-TXNDC5H3BN57 136 aa13.56□□□□□ -0.24
CCDC140-201ENST00000295226 H3BSA7 217 aa13.56□□□□□ -0.24
CCDC140-201ENST00000295226 M0R082 166 aa13.56□□□□□ -0.24
CCDC140-201ENST00000295226 MRPS14O60783 128 aaKnown RBP13.56□□□□□ -0.24
CCDC140-201ENST00000295226 SOX14O95416 240 aa13.56□□□□□ -0.24
CCDC140-201ENST00000295226 CPN1P15169 458 aa13.56□□□□□ -0.24
CCDC140-201ENST00000295226 ENPP1P22413 925 aa13.56□□□□□ -0.24
CCDC140-201ENST00000295226 CRHBPP24387 322 aa13.56□□□□□ -0.24
CCDC140-201ENST00000295226 FKBP2P26885 142 aaKnown RBP13.56□□□□□ -0.24
CCDC140-201ENST00000295226 PTGS2P35354 604 aa13.56□□□□□ -0.24
CCDC140-201ENST00000295226 IFNGR2P38484 337 aa13.56□□□□□ -0.24
CCDC140-201ENST00000295226 GSSP48637 474 aa13.56□□□□□ -0.24
CCDC140-201ENST00000295226 CLK1P49759 484 aaKnown RBP13.56□□□□□ -0.24
CCDC140-201ENST00000295226 ISL1P61371 349 aa13.56□□□□□ -0.24
CCDC140-201ENST00000295226 FHL1Q13642 323 aa13.56□□□□□ -0.24
CCDC140-201ENST00000295226 BCL2A1Q16548 175 aa13.56□□□□□ -0.24
CCDC140-201ENST00000295226 SGCBQ16585 318 aa13.56□□□□□ -0.24
CCDC140-201ENST00000295226 KLHL17Q6TDP4 642 aa13.56□□□□□ -0.24
CCDC140-201ENST00000295226 GFRALQ6UXV0 394 aa13.56□□□□□ -0.24
CCDC140-201ENST00000295226 OAFQ86UD1 273 aa13.56□□□□□ -0.24
CCDC140-201ENST00000295226 KIF18BQ86Y91 864 aa13.56□□□□□ -0.24
CCDC140-201ENST00000295226 ERI1Q8IV48 349 aaKnown RBP13.56□□□□□ -0.24
CCDC140-201ENST00000295226 LINC00471Q8N535 108 aa13.56□□□□□ -0.24
CCDC140-201ENST00000295226 TMEM99Q8N816 258 aa13.56□□□□□ -0.24
CCDC140-201ENST00000295226 ZNF417Q8TAU3 575 aa13.56□□□□□ -0.24
CCDC140-201ENST00000295226 SARAFQ96BY9 339 aa13.56□□□□□ -0.24
CCDC140-201ENST00000295226 ZNF587Q96SQ5 575 aaPredicted RBP13.56□□□□□ -0.24
CCDC140-201ENST00000295226 TAPBPLQ9BX59 468 aa13.56□□□□□ -0.24
CCDC140-201ENST00000295226 EGLN3Q9H6Z9 239 aa13.56□□□□□ -0.24
CCDC140-201ENST00000295226 ENOPH1Q9UHY7 261 aa13.56□□□□□ -0.24
CCDC140-201ENST00000295226 NBASA2RRP1 2371 aa13.56□□□□□ -0.24
CCDC140-201ENST00000295226 KIAA1549Q9HCM3 1950 aa13.56□□□□□ -0.24
CCDC140-201ENST00000295226 UNC119BA6NIH7 251 aa13.56□□□□□ -0.24
CCDC140-201ENST00000295226 OR2T1O43869 369 aa13.56□□□□□ -0.24
CCDC140-201ENST00000295226 PMS2P2O95744 297 aa13.56□□□□□ -0.24
CCDC140-201ENST00000295226 ASAH2BP0C7U1 165 aa13.56□□□□□ -0.24
CCDC140-201ENST00000295226 ANXA8P13928 327 aa13.56□□□□□ -0.24
CCDC140-201ENST00000295226 EEF1B2P24534 225 aaKnown RBP13.56□□□□□ -0.24
CCDC140-201ENST00000295226 TSPAN31Q12999 210 aa13.56□□□□□ -0.24
CCDC140-201ENST00000295226 ZNF585AQ6P3V2 769 aa13.56□□□□□ -0.24
CCDC140-201ENST00000295226 C5orf46Q6UWT4 87 aa13.56□□□□□ -0.24
CCDC140-201ENST00000295226 C3P1Q6ZMU1 363 aa13.56□□□□□ -0.24
CCDC140-201ENST00000295226 MOSPD2Q8NHP6 518 aa13.56□□□□□ -0.24
CCDC140-201ENST00000295226 PSD2Q9BQI7 771 aa13.56□□□□□ -0.24
CCDC140-201ENST00000295226 DGCR6LQ9BY27 220 aa13.56□□□□□ -0.24
CCDC140-201ENST00000295226 UCK2Q9BZX2 261 aa13.56□□□□□ -0.24
CCDC140-201ENST00000295226 KRCC1Q9NPI7 259 aaPredicted RBP13.56□□□□□ -0.24
CCDC140-201ENST00000295226 TRAPPC4Q9Y296 219 aa13.56□□□□□ -0.24
CCDC140-201ENST00000295226 TMEM5Q9Y2B1 443 aa13.56□□□□□ -0.24
CCDC140-201ENST00000295226 ALPK2Q86TB3 2170 aa13.56□□□□□ -0.24
CCDC140-201ENST00000295226 ARRDC5A6NEK1 342 aa13.55□□□□□ -0.24
CCDC140-201ENST00000295226 C11orf98E9PRG8 122 aa13.55□□□□□ -0.24
CCDC140-201ENST00000295226 TRMUO75648 421 aaKnown RBP13.55□□□□□ -0.24
CCDC140-201ENST00000295226 HIST1H2ABP04908 130 aa13.55□□□□□ -0.24
CCDC140-201ENST00000295226 TPOP07202 933 aa13.55□□□□□ -0.24
CCDC140-201ENST00000295226 FPR3P25089 353 aa13.55□□□□□ -0.24
CCDC140-201ENST00000295226 POLR2IP36954 125 aaKnown RBP13.55□□□□□ -0.24
CCDC140-201ENST00000295226 AQP2P41181 271 aa13.55□□□□□ -0.24
CCDC140-201ENST00000295226 FXYD6P3P58550 94 aa13.55□□□□□ -0.24
CCDC140-201ENST00000295226 RAC3P60763 192 aa13.55□□□□□ -0.24
CCDC140-201ENST00000295226 CSNK2BP67870 215 aa13.55□□□□□ -0.24
CCDC140-201ENST00000295226 SLC35A1P78382 337 aa13.55□□□□□ -0.24
CCDC140-201ENST00000295226 PMS2P3Q13401 168 aa13.55□□□□□ -0.24
CCDC140-201ENST00000295226 EMC4Q5J8M3 183 aa13.55□□□□□ -0.24
CCDC140-201ENST00000295226 KCTD8Q6ZWB6 473 aa13.55□□□□□ -0.24
CCDC140-201ENST00000295226 HIST3H2AQ7L7L0 130 aa13.55□□□□□ -0.24
CCDC140-201ENST00000295226 MAMDC2Q7Z304 686 aaPredicted RBP13.55□□□□□ -0.24
CCDC140-201ENST00000295226 IGFN1Q86VF2 1251 aa13.55□□□□□ -0.24
CCDC140-201ENST00000295226 HIST1H2ACQ93077 130 aa13.55□□□□□ -0.24
CCDC140-201ENST00000295226 PRDM14Q9GZV8 571 aa13.55□□□□□ -0.24
CCDC140-201ENST00000295226 FKRPQ9H9S5 495 aa13.55□□□□□ -0.24
CCDC140-201ENST00000295226 ZNF556Q9HAH1 456 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms