RNA–Protein interactions for RNA: ENST00000285116.7

SKA1-201, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SKA1, Length 2,905 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-201ENST00000285116 ZNF888P0CJ79 500 aaPredicted RBP9.53□□□□□ -0.88
SKA1-201ENST00000285116 TLX1P31314 330 aaPredicted RBP9.53□□□□□ -0.88
SKA1-201ENST00000285116 SLC6A6P31641 620 aa9.53□□□□□ -0.88
SKA1-201ENST00000285116 ILF3Q12906 894 aaKnown RBP eCLIP9.53□□□□□ -0.88
SKA1-201ENST00000285116 PDSS1Q5T2R2 415 aa9.53□□□□□ -0.88
SKA1-201ENST00000285116 ZNF626Q68DY1 528 aa9.53□□□□□ -0.88
SKA1-201ENST00000285116 ESPNLQ6ZVH7 1005 aa9.53□□□□□ -0.88
SKA1-201ENST00000285116 CDH26Q8IXH8 852 aa9.53□□□□□ -0.88
SKA1-201ENST00000285116 OR4C6Q8NH72 309 aa9.53□□□□□ -0.88
SKA1-201ENST00000285116 ZDHHC1Q8WTX9 485 aa9.53□□□□□ -0.88
SKA1-201ENST00000285116 HERVK_113Q902F9 699 aa9.53□□□□□ -0.88
SKA1-201ENST00000285116 PIGKQ92643 395 aa9.53□□□□□ -0.88
SKA1-201ENST00000285116 GHSRQ92847 366 aa9.53□□□□□ -0.88
SKA1-201ENST00000285116 MRPL48Q96GC5 212 aaKnown RBP9.53□□□□□ -0.88
SKA1-201ENST00000285116 RPP25Q9BUL9 199 aaKnown RBP9.53□□□□□ -0.88
SKA1-201ENST00000285116 ARL6Q9H0F7 186 aa9.53□□□□□ -0.88
SKA1-201ENST00000285116 NOX3Q9HBY0 568 aa9.53□□□□□ -0.88
SKA1-201ENST00000285116 KCNE5Q9UJ90 142 aa9.53□□□□□ -0.88
SKA1-201ENST00000285116 PURGQ9UJV8 347 aaKnown RBP9.53□□□□□ -0.88
SKA1-201ENST00000285116 PCOLCE2Q9UKZ9 415 aa9.53□□□□□ -0.88
SKA1-201ENST00000285116 DAPP1Q9UN19 280 aa9.53□□□□□ -0.88
SKA1-201ENST00000285116 C2orf16Q68DN1 1984 aa9.53□□□□□ -0.88
SKA1-201ENST00000285116 CENPVL1A0A0U1RR11 272 aa9.52□□□□□ -0.88
SKA1-201ENST00000285116 URADA6NGE7 173 aa9.52□□□□□ -0.88
SKA1-201ENST00000285116 FLRT2O43155 660 aa9.52□□□□□ -0.88
SKA1-201ENST00000285116 BRINP1O60477 761 aa9.52□□□□□ -0.88
SKA1-201ENST00000285116 KDM4BO94953 1096 aa9.52□□□□□ -0.88
SKA1-201ENST00000285116 CBX7O95931 251 aa9.52□□□□□ -0.88
SKA1-201ENST00000285116 HPP00738 406 aa9.52□□□□□ -0.88
SKA1-201ENST00000285116 LAMP2P13473 410 aa9.52□□□□□ -0.88
SKA1-201ENST00000285116 PRG2P13727 222 aa9.52□□□□□ -0.88
SKA1-201ENST00000285116 ZNF10P21506 573 aaPredicted RBP9.52□□□□□ -0.88
SKA1-201ENST00000285116 RPS11P62280 158 aaKnown RBP eCLIP9.52□□□□□ -0.88
SKA1-201ENST00000285116 RPS21P63220 83 aaKnown RBP9.52□□□□□ -0.88
SKA1-201ENST00000285116 MRPS10P82664 201 aaKnown RBP9.52□□□□□ -0.88
SKA1-201ENST00000285116 FGL1Q08830 312 aa9.52□□□□□ -0.88
SKA1-201ENST00000285116 KRT33BQ14525 404 aa9.52□□□□□ -0.88
SKA1-201ENST00000285116 KIR2DS3Q14952 304 aa9.52□□□□□ -0.88
SKA1-201ENST00000285116 LINGO2Q7L985 606 aa9.52□□□□□ -0.88
SKA1-201ENST00000285116 OR13C2Q8NGS9 318 aa9.52□□□□□ -0.88
SKA1-201ENST00000285116 ASB12Q8WXK4 309 aa9.52□□□□□ -0.88
SKA1-201ENST00000285116 LRRC46Q96FV0 321 aa9.52□□□□□ -0.88
SKA1-201ENST00000285116 DNTTIP1Q9H147 329 aa9.52□□□□□ -0.88
SKA1-201ENST00000285116 NRIP3Q9NQ35 241 aa9.52□□□□□ -0.88
SKA1-201ENST00000285116 MEPEQ9NQ76 525 aaPredicted RBP9.52□□□□□ -0.88
SKA1-201ENST00000285116 MRPL15Q9P015 296 aaKnown RBP9.52□□□□□ -0.88
SKA1-201ENST00000285116 RIF1Q5UIP0 2472 aaKnown RBP9.52□□□□□ -0.89
SKA1-201ENST00000285116 ARPC4-TTLL3A0A0A6YYG9 625 aa9.52□□□□□ -0.89
SKA1-201ENST00000285116 ZC3H12DA2A288 527 aaKnown RBP9.52□□□□□ -0.89
SKA1-201ENST00000285116 C5orf67F2Z3F1 127 aa9.52□□□□□ -0.89
SKA1-201ENST00000285116 GABARAPH6UMI1 98 aa9.52□□□□□ -0.89
SKA1-201ENST00000285116 REM1O75628 298 aa9.52□□□□□ -0.89
SKA1-201ENST00000285116 SLC35G6P0C7Q6 338 aa9.52□□□□□ -0.89
SKA1-201ENST00000285116 WASP42768 502 aa9.52□□□□□ -0.89
SKA1-201ENST00000285116 OR12D2P58182 307 aa9.52□□□□□ -0.89
SKA1-201ENST00000285116 SIM1P81133 766 aaPredicted RBP9.52□□□□□ -0.89
SKA1-201ENST00000285116 PLAURQ03405 335 aa9.52□□□□□ -0.89
SKA1-201ENST00000285116 GPM6BQ13491 265 aa9.52□□□□□ -0.89
SKA1-201ENST00000285116 CRMP1Q14194 572 aa9.52□□□□□ -0.89
SKA1-201ENST00000285116 FAM78AQ5JUQ0 283 aa9.52□□□□□ -0.89
SKA1-201ENST00000285116 SLC35D3Q5M8T2 416 aa9.52□□□□□ -0.89
SKA1-201ENST00000285116 OLFML2AQ68BL7 652 aa9.52□□□□□ -0.89
SKA1-201ENST00000285116 DNM1P46Q6ZS02 220 aa9.52□□□□□ -0.89
SKA1-201ENST00000285116 NUDT18Q6ZVK8 323 aa9.52□□□□□ -0.89
SKA1-201ENST00000285116 OR5J2Q8NH18 312 aa9.52□□□□□ -0.89
SKA1-201ENST00000285116 THEM6Q8WUY1 208 aa9.52□□□□□ -0.89
SKA1-201ENST00000285116 ZFPM2Q8WW38 1151 aa9.52□□□□□ -0.89
SKA1-201ENST00000285116 SMARCD2Q92925 531 aa9.52□□□□□ -0.89
SKA1-201ENST00000285116 PNPLA2Q96AD5 504 aa9.52□□□□□ -0.89
SKA1-201ENST00000285116 C12orf57Q99622 126 aa9.52□□□□□ -0.89
SKA1-201ENST00000285116 KLHL9Q9P2J3 617 aa9.52□□□□□ -0.89
SKA1-201ENST00000285116 CHRNA9Q9UGM1 479 aa9.52□□□□□ -0.89
SKA1-201ENST00000285116 NDRG3Q9UGV2 375 aa9.52□□□□□ -0.89
SKA1-201ENST00000285116 KCNK6Q9Y257 313 aa9.52□□□□□ -0.89
SKA1-201ENST00000285116 A0A0B4J203 849 aa9.52□□□□□ -0.89
SKA1-201ENST00000285116 CHURC1-FNTBB4DL54 471 aa9.52□□□□□ -0.89
SKA1-201ENST00000285116 TEX46H3BTG2 121 aa9.52□□□□□ -0.89
SKA1-201ENST00000285116 H7C2Y5 167 aa9.52□□□□□ -0.89
SKA1-201ENST00000285116 J3QLW9 94 aa9.52□□□□□ -0.89
SKA1-201ENST00000285116 B3GALT2O43825 422 aa9.52□□□□□ -0.89
SKA1-201ENST00000285116 PCDH8O95206 1070 aa9.52□□□□□ -0.89
SKA1-201ENST00000285116 IGF2P01344 180 aa9.52□□□□□ -0.89
SKA1-201ENST00000285116 ZNF19P17023 458 aa9.52□□□□□ -0.89
SKA1-201ENST00000285116 MAPK3P27361 379 aaPredicted RBP9.52□□□□□ -0.89
SKA1-201ENST00000285116 MAT2AP31153 395 aaKnown RBP9.52□□□□□ -0.89
SKA1-201ENST00000285116 DLX5P56178 289 aa9.52□□□□□ -0.89
SKA1-201ENST00000285116 TMEM255AQ5JRV8 349 aa9.52□□□□□ -0.89
SKA1-201ENST00000285116 MANEAQ5SRI9 462 aa9.52□□□□□ -0.89
SKA1-201ENST00000285116 APOOLQ6UXV4 268 aa9.52□□□□□ -0.89
SKA1-201ENST00000285116 IZUMO1Q8IYV9 350 aa9.52□□□□□ -0.89
SKA1-201ENST00000285116 C7orf57Q8NEG2 295 aa9.52□□□□□ -0.89
SKA1-201ENST00000285116 OR14A16Q8NHC5 309 aa9.52□□□□□ -0.89
SKA1-201ENST00000285116 ZNF671Q8TAW3 534 aa9.52□□□□□ -0.89
SKA1-201ENST00000285116 C15orf40Q8WUR7 153 aa9.52□□□□□ -0.89
SKA1-201ENST00000285116 CTHRC1Q96CG8 243 aa9.52□□□□□ -0.89
SKA1-201ENST00000285116 OR2A5Q96R48 311 aa9.52□□□□□ -0.89
SKA1-201ENST00000285116 DMRTA2Q96SC8 542 aa9.52□□□□□ -0.89
SKA1-201ENST00000285116 SLC25A32Q9H2D1 315 aa9.52□□□□□ -0.89
SKA1-201ENST00000285116 TMEM27Q9HBJ8 222 aa9.52□□□□□ -0.89
SKA1-201ENST00000285116 PILRAQ9UKJ1 303 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms