RNA–Protein interactions for RNA: ENST00000284770.9

PDLIM3-202, Transcript of PDZ and LIM domain 3, humanhuman

TSL 1 (best) BASIC

Gene PDLIM3, Length 1,766 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-202ENST00000284770 OR4Q3Q8NH05 313 aa16.97■□□□□ 0.31
PDLIM3-202ENST00000284770 ZNF417Q8TAU3 575 aa16.97■□□□□ 0.31
PDLIM3-202ENST00000284770 ABTB1Q969K4 478 aaPredicted RBP16.97■□□□□ 0.31
PDLIM3-202ENST00000284770 ZNF587Q96SQ5 575 aaPredicted RBP16.97■□□□□ 0.31
PDLIM3-202ENST00000284770 TAS2R5Q9NYW4 299 aa16.97■□□□□ 0.31
PDLIM3-202ENST00000284770 LIPGQ9Y5X9 500 aa16.97■□□□□ 0.31
PDLIM3-202ENST00000284770 TNFSF11O14788 317 aa16.97■□□□□ 0.31
PDLIM3-202ENST00000284770 MPZL2O60487 215 aa16.97■□□□□ 0.31
PDLIM3-202ENST00000284770 SLC6A6P31641 620 aa16.97■□□□□ 0.31
PDLIM3-202ENST00000284770 SUCLG1P53597 346 aaKnown RBP16.97■□□□□ 0.31
PDLIM3-202ENST00000284770 CDH15P55291 814 aa16.97■□□□□ 0.31
PDLIM3-202ENST00000284770 SNRPGP62308 76 aaKnown RBP16.97■□□□□ 0.31
PDLIM3-202ENST00000284770 CSNK2A1P68400 391 aaPredicted RBP16.97■□□□□ 0.31
PDLIM3-202ENST00000284770 RPL18Q07020 188 aaKnown RBP16.97■□□□□ 0.31
PDLIM3-202ENST00000284770 PMS2P3Q13401 168 aa16.97■□□□□ 0.31
PDLIM3-202ENST00000284770 TOP3AQ13472 1001 aaPredicted RBP16.97■□□□□ 0.31
PDLIM3-202ENST00000284770 CASP12Q6UXS9 341 aa16.97■□□□□ 0.31
PDLIM3-202ENST00000284770 PTCHD4Q6ZW05 846 aa16.97■□□□□ 0.31
PDLIM3-202ENST00000284770 MOSPD2Q8NHP6 518 aa16.97■□□□□ 0.31
PDLIM3-202ENST00000284770 TRUB1Q8WWH5 349 aaKnown RBP16.97■□□□□ 0.31
PDLIM3-202ENST00000284770 B3GALT5Q9Y2C3 310 aa16.97■□□□□ 0.31
PDLIM3-202ENST00000284770 TRIM64CA6NLI5 447 aa16.96■□□□□ 0.31
PDLIM3-202ENST00000284770 H0YC42 278 aa16.96■□□□□ 0.31
PDLIM3-202ENST00000284770 PLPP3O14495 311 aa16.96■□□□□ 0.31
PDLIM3-202ENST00000284770 BHLHE40O14503 412 aa16.96■□□□□ 0.31
PDLIM3-202ENST00000284770 EIF1AYO14602 144 aaKnown RBP16.96■□□□□ 0.31
PDLIM3-202ENST00000284770 SEC14L5O43304 696 aa16.96■□□□□ 0.31
PDLIM3-202ENST00000284770 XPNPEP2O43895 674 aa16.96■□□□□ 0.31
PDLIM3-202ENST00000284770 BCL2A1Q16548 175 aa16.96■□□□□ 0.31
PDLIM3-202ENST00000284770 ALG10Q5BKT4 473 aa16.96■□□□□ 0.31
PDLIM3-202ENST00000284770 VASNQ6EMK4 673 aa16.96■□□□□ 0.31
PDLIM3-202ENST00000284770 DPY19L2P2Q6ZN68 376 aa16.96■□□□□ 0.31
PDLIM3-202ENST00000284770 SIAH3Q8IW03 269 aa16.96■□□□□ 0.31
PDLIM3-202ENST00000284770 UBQLNLQ8IYU4 475 aa16.96■□□□□ 0.31
PDLIM3-202ENST00000284770 LRRC75AQ8NAA5 344 aa16.96■□□□□ 0.31
PDLIM3-202ENST00000284770 BPIFB6Q8NFQ5 453 aa16.96■□□□□ 0.31
PDLIM3-202ENST00000284770 ADGRG7Q96K78 797 aa16.96■□□□□ 0.31
PDLIM3-202ENST00000284770 GPX7Q96SL4 187 aaPredicted RBP16.96■□□□□ 0.31
PDLIM3-202ENST00000284770 IFT27Q9BW83 186 aa16.96■□□□□ 0.31
PDLIM3-202ENST00000284770 TEX12Q9BXU0 123 aa16.96■□□□□ 0.31
PDLIM3-202ENST00000284770 POLDIP3Q9BY77 421 aaKnown RBP16.96■□□□□ 0.31
PDLIM3-202ENST00000284770 MRPS26Q9BYN8 205 aaKnown RBP16.96■□□□□ 0.31
PDLIM3-202ENST00000284770 TSPAN10Q9H1Z9 355 aaPredicted RBP16.96■□□□□ 0.31
PDLIM3-202ENST00000284770 EXO5Q9H790 373 aa16.96■□□□□ 0.31
PDLIM3-202ENST00000284770 CHST11Q9NPF2 352 aa16.96■□□□□ 0.31
PDLIM3-202ENST00000284770 TVP23BQ9NYZ1 205 aa16.96■□□□□ 0.31
PDLIM3-202ENST00000284770 MED12Q93074 2177 aa16.96■□□□□ 0.31
PDLIM3-202ENST00000284770 MCIDASD6RGH6 385 aa16.95■□□□□ 0.3
PDLIM3-202ENST00000284770 AKR7A3O95154 331 aa16.95■□□□□ 0.3
PDLIM3-202ENST00000284770 ADORA3P0DMS8 318 aa16.95■□□□□ 0.3
PDLIM3-202ENST00000284770 ZNF708P17019 499 aa16.95■□□□□ 0.3
PDLIM3-202ENST00000284770 PCYT1AP49585 367 aa16.95■□□□□ 0.3
PDLIM3-202ENST00000284770 CLDN15P56746 228 aa16.95■□□□□ 0.3
PDLIM3-202ENST00000284770 CLDN18P56856 261 aa16.95■□□□□ 0.3
PDLIM3-202ENST00000284770 GABARAPL2P60520 117 aa16.95■□□□□ 0.3
PDLIM3-202ENST00000284770 RAC3P60763 192 aa16.95■□□□□ 0.3
PDLIM3-202ENST00000284770 PGGHGQ32M88 737 aa16.95■□□□□ 0.3
PDLIM3-202ENST00000284770 LNX2Q8N448 690 aa16.95■□□□□ 0.3
PDLIM3-202ENST00000284770 OR8J1Q8NGP2 316 aa16.95■□□□□ 0.3
PDLIM3-202ENST00000284770 OR2V1Q8NHB1 315 aa16.95■□□□□ 0.3
PDLIM3-202ENST00000284770 NDEL1Q9GZM8 345 aa16.95■□□□□ 0.3
PDLIM3-202ENST00000284770 PAK1IP1Q9NWT1 392 aaPredicted RBP16.95■□□□□ 0.3
PDLIM3-202ENST00000284770 BLOC1S6Q9UL45 172 aa16.95■□□□□ 0.3
PDLIM3-202ENST00000284770 BAIAP2Q9UQB8 552 aa16.95■□□□□ 0.3
PDLIM3-202ENST00000284770 DNPH1O43598 174 aa16.94■□□□□ 0.3
PDLIM3-202ENST00000284770 PRKYO43930 277 aa16.94■□□□□ 0.3
PDLIM3-202ENST00000284770 EIF1BO60739 113 aaKnown RBP16.94■□□□□ 0.3
PDLIM3-202ENST00000284770 OR6A2O95222 327 aa16.94■□□□□ 0.3
PDLIM3-202ENST00000284770 CRYABP02511 175 aaKnown RBP16.94■□□□□ 0.3
PDLIM3-202ENST00000284770 RPL4P36578 427 aaKnown RBP16.94■□□□□ 0.3
PDLIM3-202ENST00000284770 CARD18P57730 90 aa16.94■□□□□ 0.3
PDLIM3-202ENST00000284770 H3F3AP84243 136 aa16.94■□□□□ 0.3
PDLIM3-202ENST00000284770 ZP4Q12836 540 aa16.94■□□□□ 0.3
PDLIM3-202ENST00000284770 TMEM201Q5SNT2 666 aa16.94■□□□□ 0.3
PDLIM3-202ENST00000284770 HBMQ6B0K9 141 aa16.94■□□□□ 0.3
PDLIM3-202ENST00000284770 PAQR6Q6TCH4 344 aa16.94■□□□□ 0.3
PDLIM3-202ENST00000284770 IGFN1Q86VF2 1251 aa16.94■□□□□ 0.3
PDLIM3-202ENST00000284770 TMEM99Q8N816 258 aa16.94■□□□□ 0.3
PDLIM3-202ENST00000284770 TCEANCQ8N8B7 351 aa16.94■□□□□ 0.3
PDLIM3-202ENST00000284770 ADPRHL1Q8NDY3 354 aa16.94■□□□□ 0.3
PDLIM3-202ENST00000284770 SGCDQ92629 289 aa16.94■□□□□ 0.3
PDLIM3-202ENST00000284770 IL4I1Q96RQ9 567 aa16.94■□□□□ 0.3
PDLIM3-202ENST00000284770 NRIP3Q9NQ35 241 aa16.94■□□□□ 0.3
PDLIM3-202ENST00000284770 PLCXD1Q9NUJ7 323 aa16.94■□□□□ 0.3
PDLIM3-202ENST00000284770 LUZP4Q9P127 313 aa16.94■□□□□ 0.3
PDLIM3-202ENST00000284770 A0A1B0GVC2 190 aa16.94■□□□□ 0.3
PDLIM3-202ENST00000284770 MS4A18H0YCH9 400 aa16.94■□□□□ 0.3
PDLIM3-202ENST00000284770 RNF13O43567 381 aa16.94■□□□□ 0.3
PDLIM3-202ENST00000284770 ATP6V1B1P15313 513 aa16.94■□□□□ 0.3
PDLIM3-202ENST00000284770 AHCYP23526 432 aa16.94■□□□□ 0.3
PDLIM3-202ENST00000284770 CSNK2BP67870 215 aa16.94■□□□□ 0.3
PDLIM3-202ENST00000284770 PUDPQ08623 228 aa16.94■□□□□ 0.3
PDLIM3-202ENST00000284770 ZNF239Q16600 458 aaKnown RBP16.94■□□□□ 0.3
PDLIM3-202ENST00000284770 MS4A18Q3C1V0 323 aa16.94■□□□□ 0.3
PDLIM3-202ENST00000284770 PDSS1Q5T2R2 415 aa16.94■□□□□ 0.3
PDLIM3-202ENST00000284770 EXD3Q8N9H8 876 aa16.94■□□□□ 0.3
PDLIM3-202ENST00000284770 OR10D3Q8NH80 312 aa16.94■□□□□ 0.3
PDLIM3-202ENST00000284770 TIMP4Q99727 224 aa16.94■□□□□ 0.3
PDLIM3-202ENST00000284770 PRRG3Q9BZD7 231 aa16.94■□□□□ 0.3
PDLIM3-202ENST00000284770 DUSP21Q9H596 190 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms