RNA–Protein interactions for RNA: ENST00000284767.9

PDLIM3-201, Transcript of PDZ and LIM domain 3, humanhuman

TSL 5 BASIC

Gene PDLIM3, Length 2,589 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-201ENST00000284767 RPS7P62081 194 aaKnown RBP16.76■□□□□ 0.27
PDLIM3-201ENST00000284767 SNTB2Q13425 540 aaKnown RBP16.76■□□□□ 0.27
PDLIM3-201ENST00000284767 TMEM65Q6PI78 240 aa16.76■□□□□ 0.27
PDLIM3-201ENST00000284767 DACT3Q96B18 629 aaPredicted RBP16.76■□□□□ 0.27
PDLIM3-201ENST00000284767 ZNF436Q9C0F3 470 aaPredicted RBP16.76■□□□□ 0.27
PDLIM3-201ENST00000284767 ZCCHC4Q9H5U6 513 aa16.76■□□□□ 0.27
PDLIM3-201ENST00000284767 MAB21L2Q9Y586 359 aa16.76■□□□□ 0.27
PDLIM3-201ENST00000284767 ZDBF2Q9HCK1 2354 aa16.75■□□□□ 0.27
PDLIM3-201ENST00000284767 CIB4A0PJX0 185 aa16.75■□□□□ 0.27
PDLIM3-201ENST00000284767 TRAPPC13A5PLN9 417 aa16.75■□□□□ 0.27
PDLIM3-201ENST00000284767 TRABD2BA6NFA1 517 aa16.75■□□□□ 0.27
PDLIM3-201ENST00000284767 SYPP08247 313 aa16.75■□□□□ 0.27
PDLIM3-201ENST00000284767 SBK2P0C263 348 aa16.75■□□□□ 0.27
PDLIM3-201ENST00000284767 ACTC1P68032 377 aa16.75■□□□□ 0.27
PDLIM3-201ENST00000284767 ACTA1P68133 377 aa16.75■□□□□ 0.27
PDLIM3-201ENST00000284767 PTP4A1Q93096 173 aa16.75■□□□□ 0.27
PDLIM3-201ENST00000284767 MS4A3Q96HJ5 214 aa16.75■□□□□ 0.27
PDLIM3-201ENST00000284767 ERMAPQ96PL5 475 aaPredicted RBP16.75■□□□□ 0.27
PDLIM3-201ENST00000284767 STACQ99469 402 aa16.75■□□□□ 0.27
PDLIM3-201ENST00000284767 MFRPQ9BY79 579 aa16.75■□□□□ 0.27
PDLIM3-201ENST00000284767 ERVK-19Q9WJR5 959 aa16.75■□□□□ 0.27
PDLIM3-201ENST00000284767 J3QLW9 94 aa16.75■□□□□ 0.27
PDLIM3-201ENST00000284767 ITGA10O75578 1167 aa16.75■□□□□ 0.27
PDLIM3-201ENST00000284767 ZNF19P17023 458 aa16.75■□□□□ 0.27
PDLIM3-201ENST00000284767 SSTR2P30874 369 aa16.75■□□□□ 0.27
PDLIM3-201ENST00000284767 ZNF85Q03923 595 aa16.75■□□□□ 0.27
PDLIM3-201ENST00000284767 RNASE12Q5GAN4 147 aaKnown RBP16.75■□□□□ 0.27
PDLIM3-201ENST00000284767 NPSR1Q6W5P4 371 aa16.75■□□□□ 0.27
PDLIM3-201ENST00000284767 ADGRG3Q86Y34 549 aa16.75■□□□□ 0.27
PDLIM3-201ENST00000284767 SLC2A12Q8TD20 617 aa16.75■□□□□ 0.27
PDLIM3-201ENST00000284767 SMIM4Q8WVI0 70 aa16.75■□□□□ 0.27
PDLIM3-201ENST00000284767 ADGRL4Q9HBW9 690 aa16.75■□□□□ 0.27
PDLIM3-201ENST00000284767 BRINP1O60477 761 aa16.74■□□□□ 0.27
PDLIM3-201ENST00000284767 PRAF2O60831 178 aa16.74■□□□□ 0.27
PDLIM3-201ENST00000284767 PEX14O75381 377 aa16.74■□□□□ 0.27
PDLIM3-201ENST00000284767 NKX2-2O95096 273 aa16.74■□□□□ 0.27
PDLIM3-201ENST00000284767 MT-ND4P03905 459 aa16.74■□□□□ 0.27
PDLIM3-201ENST00000284767 IFNA16P05015 189 aa16.74■□□□□ 0.27
PDLIM3-201ENST00000284767 EPXP11678 715 aa16.74■□□□□ 0.27
PDLIM3-201ENST00000284767 NID1P14543 1247 aa16.74■□□□□ 0.27
PDLIM3-201ENST00000284767 FOLR1P15328 257 aa16.74■□□□□ 0.27
PDLIM3-201ENST00000284767 ATF1P18846 271 aa16.74■□□□□ 0.27
PDLIM3-201ENST00000284767 FUT1P19526 365 aa16.74■□□□□ 0.27
PDLIM3-201ENST00000284767 MAKP20794 623 aa16.74■□□□□ 0.27
PDLIM3-201ENST00000284767 RPS4Y1P22090 263 aaKnown RBP16.74■□□□□ 0.27
PDLIM3-201ENST00000284767 LCN1P31025 176 aa16.74■□□□□ 0.27
PDLIM3-201ENST00000284767 ACVR1BP36896 505 aa16.74■□□□□ 0.27
PDLIM3-201ENST00000284767 FOXK2Q01167 660 aa16.74■□□□□ 0.27
PDLIM3-201ENST00000284767 WDR88Q6ZMY6 472 aa16.74■□□□□ 0.27
PDLIM3-201ENST00000284767 SLITRK4Q8IW52 837 aa16.74■□□□□ 0.27
PDLIM3-201ENST00000284767 FAM98AQ8NCA5 519 aaKnown RBP16.74■□□□□ 0.27
PDLIM3-201ENST00000284767 CEP76Q8TAP6 659 aa16.74■□□□□ 0.27
PDLIM3-201ENST00000284767 GHSRQ92847 366 aa16.74■□□□□ 0.27
PDLIM3-201ENST00000284767 CMTM3Q96MX0 182 aa16.74■□□□□ 0.27
PDLIM3-201ENST00000284767 DGAT2Q96PD7 388 aa16.74■□□□□ 0.27
PDLIM3-201ENST00000284767 NUDT22Q9BRQ3 303 aa16.74■□□□□ 0.27
PDLIM3-201ENST00000284767 GSX2Q9BZM3 304 aa16.74■□□□□ 0.27
PDLIM3-201ENST00000284767 C20orf85Q9H1P6 137 aa16.74■□□□□ 0.27
PDLIM3-201ENST00000284767 EPHA6Q9UF33 1036 aa16.74■□□□□ 0.27
PDLIM3-201ENST00000284767 MRPS33Q9Y291 106 aaKnown RBP16.74■□□□□ 0.27
PDLIM3-201ENST00000284767 MRPS7Q9Y2R9 242 aaKnown RBP16.74■□□□□ 0.27
PDLIM3-201ENST00000284767 CDHR4A6H8M9 788 aa16.74■□□□□ 0.27
PDLIM3-201ENST00000284767 H3BMH7 237 aa16.74■□□□□ 0.27
PDLIM3-201ENST00000284767 BET1O15155 118 aa16.74■□□□□ 0.27
PDLIM3-201ENST00000284767 NUDT21O43809 227 aaKnown RBP16.74■□□□□ 0.27
PDLIM3-201ENST00000284767 ADAM11O75078 769 aa16.74■□□□□ 0.27
PDLIM3-201ENST00000284767 THBS1P07996 1170 aa16.74■□□□□ 0.27
PDLIM3-201ENST00000284767 ANKRD34CP0C6C1 535 aa16.74■□□□□ 0.27
PDLIM3-201ENST00000284767 FOXL2P58012 376 aa16.74■□□□□ 0.27
PDLIM3-201ENST00000284767 OR12D2P58182 307 aa16.74■□□□□ 0.27
PDLIM3-201ENST00000284767 ZP1P60852 638 aa16.74■□□□□ 0.27
PDLIM3-201ENST00000284767 BAMBIQ13145 260 aa16.74■□□□□ 0.27
PDLIM3-201ENST00000284767 FAM69AQ5T7M9 428 aa16.74■□□□□ 0.27
PDLIM3-201ENST00000284767 SEZ6L2Q6UXD5 910 aa16.74■□□□□ 0.27
PDLIM3-201ENST00000284767 ZNF595Q8IYB9 648 aa16.74■□□□□ 0.27
PDLIM3-201ENST00000284767 BEST4Q8NFU0 473 aa16.74■□□□□ 0.27
PDLIM3-201ENST00000284767 OR2T35Q8NGX2 323 aa16.74■□□□□ 0.27
PDLIM3-201ENST00000284767 OR1L3Q8NH93 324 aa16.74■□□□□ 0.27
PDLIM3-201ENST00000284767 TMEM239Q8WW34 195 aa16.74■□□□□ 0.27
PDLIM3-201ENST00000284767 ENKD1Q9H0I2 346 aa16.74■□□□□ 0.27
PDLIM3-201ENST00000284767 CUTCQ9NTM9 273 aa16.74■□□□□ 0.27
PDLIM3-201ENST00000284767 HAO2Q9NYQ3 351 aa16.74■□□□□ 0.27
PDLIM3-201ENST00000284767 ZNF224Q9NZL3 707 aa16.74■□□□□ 0.27
PDLIM3-201ENST00000284767 SPATA2Q9UM82 520 aa16.74■□□□□ 0.27
PDLIM3-201ENST00000284767 CLEC4AQ9UMR7 237 aa16.74■□□□□ 0.27
PDLIM3-201ENST00000284767 ANKRD61A6NGH8 418 aa16.73■□□□□ 0.27
PDLIM3-201ENST00000284767 A8MUA0 341 aa16.73■□□□□ 0.27
PDLIM3-201ENST00000284767 CLDN4O14493 209 aa16.73■□□□□ 0.27
PDLIM3-201ENST00000284767 CDK2AP1O14519 115 aa16.73■□□□□ 0.27
PDLIM3-201ENST00000284767 FLRT2O43155 660 aa16.73■□□□□ 0.27
PDLIM3-201ENST00000284767 TGM6O95932 706 aa16.73■□□□□ 0.27
PDLIM3-201ENST00000284767 DBIP07108 87 aaKnown RBP16.73■□□□□ 0.27
PDLIM3-201ENST00000284767 MRPL3P09001 348 aaKnown RBP16.73■□□□□ 0.27
PDLIM3-201ENST00000284767 SNRPBP14678 240 aaKnown RBP16.73■□□□□ 0.27
PDLIM3-201ENST00000284767 C4BPBP20851 252 aa16.73■□□□□ 0.27
PDLIM3-201ENST00000284767 SLC2A5P22732 501 aa16.73■□□□□ 0.27
PDLIM3-201ENST00000284767 SLC16A1P53985 500 aa16.73■□□□□ 0.27
PDLIM3-201ENST00000284767 GARNL3Q5VVW2 1013 aa16.73■□□□□ 0.27
PDLIM3-201ENST00000284767 BMP8AQ7Z5Y6 402 aa16.73■□□□□ 0.27
PDLIM3-201ENST00000284767 ZNF321PQ8N8H1 164 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms