RNA–Protein interactions for RNA: ENST00000271628.8

SF3B4-201, Transcript of splicing factor 3b subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B4, Length 2,085 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B4-201ENST00000271628 MOGAT1Q96PD6 335 aa13.91□□□□□ -0.18
SF3B4-201ENST00000271628 COQ7Q99807 217 aa13.91□□□□□ -0.18
SF3B4-201ENST00000271628 KATNB1Q9BVA0 655 aa13.91□□□□□ -0.18
SF3B4-201ENST00000271628 ALG8Q9BVK2 526 aa13.91□□□□□ -0.18
SF3B4-201ENST00000271628 DEFB126Q9BYW3 111 aa13.91□□□□□ -0.18
SF3B4-201ENST00000271628 ABCB9Q9NP78 766 aa13.91□□□□□ -0.18
SF3B4-201ENST00000271628 SF3B6Q9Y3B4 125 aaKnown RBP13.91□□□□□ -0.18
SF3B4-201ENST00000271628 ADAM18Q9Y3Q7 739 aa13.91□□□□□ -0.18
SF3B4-201ENST00000271628 NCOR1O75376 2440 aa13.9□□□□□ -0.18
SF3B4-201ENST00000271628 A0A1W2PQL4 384 aaPredicted RBP13.9□□□□□ -0.18
SF3B4-201ENST00000271628 ZC3H12DA2A288 527 aaKnown RBP13.9□□□□□ -0.18
SF3B4-201ENST00000271628 FABP12A6NFH5 140 aa13.9□□□□□ -0.18
SF3B4-201ENST00000271628 MT-ATP6P00846 226 aa13.9□□□□□ -0.18
SF3B4-201ENST00000271628 AQP2P41181 271 aa13.9□□□□□ -0.18
SF3B4-201ENST00000271628 MXD1Q05195 221 aa13.9□□□□□ -0.18
SF3B4-201ENST00000271628 HNRNPA0Q13151 305 aaKnown RBP13.9□□□□□ -0.18
SF3B4-201ENST00000271628 ASAH1Q13510 395 aa13.9□□□□□ -0.18
SF3B4-201ENST00000271628 PON3Q15166 354 aa13.9□□□□□ -0.18
SF3B4-201ENST00000271628 ZMAT1Q5H9K5 638 aa13.9□□□□□ -0.18
SF3B4-201ENST00000271628 EMC4Q5J8M3 183 aa13.9□□□□□ -0.18
SF3B4-201ENST00000271628 LCN1P1Q5VSP4 162 aa13.9□□□□□ -0.18
SF3B4-201ENST00000271628 FAM131AQ6UXB0 335 aa13.9□□□□□ -0.18
SF3B4-201ENST00000271628 NANOGNBQ7Z5D8 188 aa13.9□□□□□ -0.18
SF3B4-201ENST00000271628 POMGNT2Q8NAT1 580 aa13.9□□□□□ -0.18
SF3B4-201ENST00000271628 ELP5Q8TE02 316 aa13.9□□□□□ -0.18
SF3B4-201ENST00000271628 TAAR8Q969N4 342 aa13.9□□□□□ -0.18
SF3B4-201ENST00000271628 C1GALT1C1Q96EU7 318 aa13.9□□□□□ -0.18
SF3B4-201ENST00000271628 KLHDC3Q9BQ90 382 aa13.9□□□□□ -0.18
SF3B4-201ENST00000271628 ZPBPQ9BS86 351 aa13.9□□□□□ -0.18
SF3B4-201ENST00000271628 OR2B2Q9GZK3 357 aa13.9□□□□□ -0.18
SF3B4-201ENST00000271628 SLC22A4Q9H015 551 aa13.9□□□□□ -0.18
SF3B4-201ENST00000271628 BABAM2Q9NXR7 383 aa13.9□□□□□ -0.18
SF3B4-201ENST00000271628 ANKUB1A6NFN9 424 aa13.89□□□□□ -0.19
SF3B4-201ENST00000271628 A8MVM7 634 aa13.89□□□□□ -0.19
SF3B4-201ENST00000271628 ZNF354AO60765 605 aaPredicted RBP13.89□□□□□ -0.19
SF3B4-201ENST00000271628 TRAPPC2P0DI81 140 aa13.89□□□□□ -0.19
SF3B4-201ENST00000271628 TRAPPC2BP0DI82 140 aa13.89□□□□□ -0.19
SF3B4-201ENST00000271628 GAAP10253 952 aa13.89□□□□□ -0.19
SF3B4-201ENST00000271628 CLUP10909 449 aa13.89□□□□□ -0.19
SF3B4-201ENST00000271628 S100A1P23297 94 aa13.89□□□□□ -0.19
SF3B4-201ENST00000271628 UQCRC1P31930 480 aa13.89□□□□□ -0.19
SF3B4-201ENST00000271628 ERVK-25P63136 954 aa13.89□□□□□ -0.19
SF3B4-201ENST00000271628 LTBQ06643 244 aa13.89□□□□□ -0.19
SF3B4-201ENST00000271628 IL10RAQ13651 578 aa13.89□□□□□ -0.19
SF3B4-201ENST00000271628 COL28A1Q2UY09 1125 aa13.89□□□□□ -0.19
SF3B4-201ENST00000271628 CD200R1LQ6Q8B3 271 aa13.89□□□□□ -0.19
SF3B4-201ENST00000271628 FAM198BQ6UWH4 519 aa13.89□□□□□ -0.19
SF3B4-201ENST00000271628 GPALPP1Q8IXQ4 340 aa13.89□□□□□ -0.19
SF3B4-201ENST00000271628 NPEPL1Q8NDH3 523 aa13.89□□□□□ -0.19
SF3B4-201ENST00000271628 OR10H4Q8NGA5 316 aa13.89□□□□□ -0.19
SF3B4-201ENST00000271628 MOSPD2Q8NHP6 518 aa13.89□□□□□ -0.19
SF3B4-201ENST00000271628 RNF138Q8WVD3 245 aa13.89□□□□□ -0.19
SF3B4-201ENST00000271628 ST8SIA1Q92185 356 aa13.89□□□□□ -0.19
SF3B4-201ENST00000271628 SMPDL3BQ92485 455 aa13.89□□□□□ -0.19
SF3B4-201ENST00000271628 TMEM203Q969S6 136 aa13.89□□□□□ -0.19
SF3B4-201ENST00000271628 STRADBQ9C0K7 418 aa13.89□□□□□ -0.19
SF3B4-201ENST00000271628 MIXL1Q9H2W2 232 aa13.89□□□□□ -0.19
SF3B4-201ENST00000271628 ADGRL4Q9HBW9 690 aa13.89□□□□□ -0.19
SF3B4-201ENST00000271628 KLHL1Q9NR64 748 aa13.89□□□□□ -0.19
SF3B4-201ENST00000271628 SDHAF3Q9NRP4 125 aa13.89□□□□□ -0.19
SF3B4-201ENST00000271628 FBXL4Q9UKA2 621 aa13.89□□□□□ -0.19
SF3B4-201ENST00000271628 PTRH2Q9Y3E5 179 aaKnown RBP13.89□□□□□ -0.19
SF3B4-201ENST00000271628 WDFY3Q8IZQ1 3526 aa13.89□□□□□ -0.19
SF3B4-201ENST00000271628 EXPH5Q8NEV8 1989 aa13.89□□□□□ -0.19
SF3B4-201ENST00000271628 TMED7-TICAM2A0A0A6YYA0 188 aa13.89□□□□□ -0.19
SF3B4-201ENST00000271628 A0A1W2PQ09 198 aa13.89□□□□□ -0.19
SF3B4-201ENST00000271628 RGS13O14921 159 aa13.89□□□□□ -0.19
SF3B4-201ENST00000271628 KLF7O75840 302 aaPredicted RBP13.89□□□□□ -0.19
SF3B4-201ENST00000271628 TXNDC12O95881 172 aa13.89□□□□□ -0.19
SF3B4-201ENST00000271628 MSX1P28360 303 aa13.89□□□□□ -0.19
SF3B4-201ENST00000271628 SDHAP31040 664 aa13.89□□□□□ -0.19
SF3B4-201ENST00000271628 SDC2P34741 201 aa13.89□□□□□ -0.19
SF3B4-201ENST00000271628 CTXN1P60606 82 aa13.89□□□□□ -0.19
SF3B4-201ENST00000271628 GGTLC2Q14390 218 aa13.89□□□□□ -0.19
SF3B4-201ENST00000271628 PCOLCEQ15113 449 aa13.89□□□□□ -0.19
SF3B4-201ENST00000271628 EXT1Q16394 746 aa13.89□□□□□ -0.19
SF3B4-201ENST00000271628 BTBD16Q32M84 506 aa13.89□□□□□ -0.19
SF3B4-201ENST00000271628 ZNF791Q3KP31 576 aaPredicted RBP13.89□□□□□ -0.19
SF3B4-201ENST00000271628 FAM69BQ5VUD6 431 aa13.89□□□□□ -0.19
SF3B4-201ENST00000271628 MAMDC2Q7Z304 686 aaPredicted RBP13.89□□□□□ -0.19
SF3B4-201ENST00000271628 JAZF1Q86VZ6 243 aa13.89□□□□□ -0.19
SF3B4-201ENST00000271628 ADGRG3Q86Y34 549 aa13.89□□□□□ -0.19
SF3B4-201ENST00000271628 LRRC75AQ8NAA5 344 aa13.89□□□□□ -0.19
SF3B4-201ENST00000271628 OR2Y1Q8NGV0 311 aa13.89□□□□□ -0.19
SF3B4-201ENST00000271628 STK35Q8TDR2 534 aa13.89□□□□□ -0.19
SF3B4-201ENST00000271628 DIRAS2Q96HU8 199 aa13.89□□□□□ -0.19
SF3B4-201ENST00000271628 DDOQ99489 341 aa13.89□□□□□ -0.19
SF3B4-201ENST00000271628 TIGARQ9NQ88 270 aa13.89□□□□□ -0.19
SF3B4-201ENST00000271628 RBMX2Q9Y388 322 aaKnown RBP13.89□□□□□ -0.19
SF3B4-201ENST00000271628 TMED7Q9Y3B3 224 aa13.89□□□□□ -0.19
SF3B4-201ENST00000271628 NOX1Q9Y5S8 564 aa13.89□□□□□ -0.19
SF3B4-201ENST00000271628 MPDZO75970 2070 aa13.88□□□□□ -0.19
SF3B4-201ENST00000271628 IGHV1-45A0A0A0MS14 117 aa13.88□□□□□ -0.19
SF3B4-201ENST00000271628 ADAM10O14672 748 aa13.88□□□□□ -0.19
SF3B4-201ENST00000271628 OR2T1O43869 369 aa13.88□□□□□ -0.19
SF3B4-201ENST00000271628 SUSD5O60279 629 aa13.88□□□□□ -0.19
SF3B4-201ENST00000271628 NPIPB7O75200 414 aa13.88□□□□□ -0.19
SF3B4-201ENST00000271628 HLA-DPB1P04440 258 aa13.88□□□□□ -0.19
SF3B4-201ENST00000271628 GYPBP06028 91 aa13.88□□□□□ -0.19
SF3B4-201ENST00000271628 FBXO45P0C2W1 286 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms