RNA–Protein interactions for RNA: ENST00000270061.11

SSBP4-201, Transcript of single stranded DNA binding protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SSBP4, Length 1,768 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-201ENST00000270061 ZG16O60844 167 aa22.17■■□□□ 1.14
SSBP4-201ENST00000270061 CCL3P10147 92 aa22.17■■□□□ 1.14
SSBP4-201ENST00000270061 HSF1Q00613 529 aa22.17■■□□□ 1.14
SSBP4-201ENST00000270061 PLGLB1Q02325 96 aa22.17■■□□□ 1.14
SSBP4-201ENST00000270061 FHL1Q13642 323 aa22.17■■□□□ 1.14
SSBP4-201ENST00000270061 OAFQ86UD1 273 aa22.17■■□□□ 1.14
SSBP4-201ENST00000270061 LNX2Q8N448 690 aa22.17■■□□□ 1.14
SSBP4-201ENST00000270061 STX19Q8N4C7 294 aa22.17■■□□□ 1.14
SSBP4-201ENST00000270061 DUSP19Q8WTR2 217 aa22.17■■□□□ 1.14
SSBP4-201ENST00000270061 LIPHQ8WWY8 451 aa22.17■■□□□ 1.14
SSBP4-201ENST00000270061 LRR1Q96L50 414 aa22.17■■□□□ 1.14
SSBP4-201ENST00000270061 KLHDC3Q9BQ90 382 aa22.17■■□□□ 1.14
SSBP4-201ENST00000270061 ZNF835Q9Y2P0 537 aa22.17■■□□□ 1.14
SSBP4-201ENST00000270061 PINLYPA6NC86 204 aa22.17■■□□□ 1.14
SSBP4-201ENST00000270061 ACOT7O00154 380 aa22.17■■□□□ 1.14
SSBP4-201ENST00000270061 CCL21O00585 134 aa22.17■■□□□ 1.14
SSBP4-201ENST00000270061 ABOP16442 354 aa22.17■■□□□ 1.14
SSBP4-201ENST00000270061 ACVR2AP27037 513 aa22.17■■□□□ 1.14
SSBP4-201ENST00000270061 ST3GAL4Q11206 333 aa22.17■■□□□ 1.14
SSBP4-201ENST00000270061 TMEM44Q2T9K0 475 aa22.17■■□□□ 1.14
SSBP4-201ENST00000270061 SLC22A10Q63ZE4 541 aa22.17■■□□□ 1.14
SSBP4-201ENST00000270061 ZNF420Q8TAQ5 688 aaPredicted RBP22.17■■□□□ 1.14
SSBP4-201ENST00000270061 GPR119Q8TDV5 335 aa22.17■■□□□ 1.14
SSBP4-201ENST00000270061 RORBQ92753 470 aa22.17■■□□□ 1.14
SSBP4-201ENST00000270061 ZNF582Q96NG8 517 aaPredicted RBP22.17■■□□□ 1.14
SSBP4-201ENST00000270061 RSL24D1Q9UHA3 163 aaKnown RBP22.17■■□□□ 1.14
SSBP4-201ENST00000270061 TINAGQ9UJW2 476 aa22.17■■□□□ 1.14
SSBP4-201ENST00000270061 BAIAP2Q9UQB8 552 aa22.17■■□□□ 1.14
SSBP4-201ENST00000270061 CCDC160A6NGH7 325 aa22.16■■□□□ 1.14
SSBP4-201ENST00000270061 KDM4EB2RXH2 506 aaPredicted RBP22.16■■□□□ 1.14
SSBP4-201ENST00000270061 GNB5O14775 395 aa22.16■■□□□ 1.14
SSBP4-201ENST00000270061 TACR3P29371 465 aa22.16■■□□□ 1.14
SSBP4-201ENST00000270061 C21orf33P30042 268 aaPredicted RBP22.16■■□□□ 1.14
SSBP4-201ENST00000270061 SUMO3P55854 103 aaPredicted RBP22.16■■□□□ 1.14
SSBP4-201ENST00000270061 PPIAP62937 165 aaKnown RBP22.16■■□□□ 1.14
SSBP4-201ENST00000270061 TBCEQ15813 527 aaPredicted RBP22.16■■□□□ 1.14
SSBP4-201ENST00000270061 C3AR1Q16581 482 aa22.16■■□□□ 1.14
SSBP4-201ENST00000270061 SYT6Q5T7P8 510 aaPredicted RBP22.16■■□□□ 1.14
SSBP4-201ENST00000270061 MAMDC2Q7Z304 686 aaPredicted RBP22.16■■□□□ 1.14
SSBP4-201ENST00000270061 OR5M3Q8NGP4 307 aa22.16■■□□□ 1.14
SSBP4-201ENST00000270061 PAQR8Q8TEZ7 354 aa22.16■■□□□ 1.14
SSBP4-201ENST00000270061 FCGR1BQ92637 280 aa22.16■■□□□ 1.14
SSBP4-201ENST00000270061 TNFRSF13CQ96RJ3 184 aa22.16■■□□□ 1.14
SSBP4-201ENST00000270061 CDCA4Q9BXL8 241 aa22.16■■□□□ 1.14
SSBP4-201ENST00000270061 TTTY12Q9BZ98 90 aa22.16■■□□□ 1.14
SSBP4-201ENST00000270061 MRPS18AQ9NVS2 196 aaKnown RBP22.16■■□□□ 1.14
SSBP4-201ENST00000270061 SNTNA6NMZ2 147 aa22.15■■□□□ 1.14
SSBP4-201ENST00000270061 PRODHO43272 600 aa22.15■■□□□ 1.14
SSBP4-201ENST00000270061 OR7A10O76100 309 aa22.15■■□□□ 1.14
SSBP4-201ENST00000270061 DCKP27707 260 aa22.15■■□□□ 1.14
SSBP4-201ENST00000270061 MAP2K4P45985 399 aa22.15■■□□□ 1.14
SSBP4-201ENST00000270061 IRF3Q14653 427 aa22.15■■□□□ 1.14
SSBP4-201ENST00000270061 UBE2UQ5VVX9 321 aa22.15■■□□□ 1.14
SSBP4-201ENST00000270061 SLC46A3Q7Z3Q1 461 aa22.15■■□□□ 1.14
SSBP4-201ENST00000270061 SLC22A16Q86VW1 577 aa22.15■■□□□ 1.14
SSBP4-201ENST00000270061 CLVS1Q8IUQ0 354 aaPredicted RBP22.15■■□□□ 1.14
SSBP4-201ENST00000270061 ENKD1Q9H0I2 346 aa22.15■■□□□ 1.14
SSBP4-201ENST00000270061 MCCC2Q9HCC0 563 aa22.15■■□□□ 1.14
SSBP4-201ENST00000270061 SH2D2AQ9NP31 389 aa22.15■■□□□ 1.14
SSBP4-201ENST00000270061 ZNF337Q9Y3M9 751 aa22.15■■□□□ 1.14
SSBP4-201ENST00000270061 TRAV27A0A087WT01 109 aa22.15■■□□□ 1.14
SSBP4-201ENST00000270061 INMTO95050 263 aa22.15■■□□□ 1.14
SSBP4-201ENST00000270061 CLDN1O95832 211 aa22.15■■□□□ 1.14
SSBP4-201ENST00000270061 DBTP11182 482 aaKnown RBP22.15■■□□□ 1.14
SSBP4-201ENST00000270061 DNASE1L1P49184 302 aa22.15■■□□□ 1.14
SSBP4-201ENST00000270061 ZNF91Q05481 1191 aa22.15■■□□□ 1.14
SSBP4-201ENST00000270061 TOMM34Q15785 309 aaPredicted RBP22.15■■□□□ 1.14
SSBP4-201ENST00000270061 MTFR2Q6P444 385 aa22.15■■□□□ 1.14
SSBP4-201ENST00000270061 THSD4Q6ZMP0 1018 aa22.15■■□□□ 1.14
SSBP4-201ENST00000270061 ALDH16A1Q8IZ83 802 aa22.15■■□□□ 1.14
SSBP4-201ENST00000270061 OR10G3Q8NGC4 313 aa22.15■■□□□ 1.14
SSBP4-201ENST00000270061 OR51A7Q8NH64 312 aa22.15■■□□□ 1.14
SSBP4-201ENST00000270061 PLEKHA8Q96JA3 519 aa22.15■■□□□ 1.14
SSBP4-201ENST00000270061 FN3KQ9H479 309 aa22.15■■□□□ 1.14
SSBP4-201ENST00000270061 IL20RAQ9UHF4 553 aa22.15■■□□□ 1.14
SSBP4-201ENST00000270061 OSGIN1Q9UJX0 560 aa22.15■■□□□ 1.14
SSBP4-201ENST00000270061 NCOA6Q14686 2063 aaPredicted RBP22.14■■□□□ 1.14
SSBP4-201ENST00000270061 NCKAP5O14513 1909 aa22.14■■□□□ 1.14
SSBP4-201ENST00000270061 UNC79Q9P2D8 2635 aa22.14■■□□□ 1.13
SSBP4-201ENST00000270061 IGLV3-32A0A0A0MS00 114 aa22.14■■□□□ 1.13
SSBP4-201ENST00000270061 C17orf51A8MQB3 221 aa22.14■■□□□ 1.13
SSBP4-201ENST00000270061 FAM166BA8MTA8 275 aa22.14■■□□□ 1.13
SSBP4-201ENST00000270061 ZNHIT1O43257 154 aa22.14■■□□□ 1.13
SSBP4-201ENST00000270061 FADS2O95864 444 aaKnown RBP22.14■■□□□ 1.13
SSBP4-201ENST00000270061 SLC6A6P31641 620 aa22.14■■□□□ 1.13
SSBP4-201ENST00000270061 GP2P55259 537 aaKnown RBP22.14■■□□□ 1.13
SSBP4-201ENST00000270061 DLX5P56178 289 aa22.14■■□□□ 1.13
SSBP4-201ENST00000270061 EGR4Q05215 589 aa22.14■■□□□ 1.13
SSBP4-201ENST00000270061 RNLSQ5VYX0 342 aa22.14■■□□□ 1.13
SSBP4-201ENST00000270061 BCDIN3DQ7Z5W3 292 aaKnown RBP22.14■■□□□ 1.13
SSBP4-201ENST00000270061 ANKK1Q8NFD2 765 aa22.14■■□□□ 1.13
SSBP4-201ENST00000270061 DOK1Q99704 481 aa22.14■■□□□ 1.13
SSBP4-201ENST00000270061 SDHAF3Q9NRP4 125 aa22.14■■□□□ 1.13
SSBP4-201ENST00000270061 CHCHD2Q9Y6H1 151 aaPredicted RBP22.14■■□□□ 1.13
SSBP4-201ENST00000270061 A0A1B0GTH9 108 aa22.13■■□□□ 1.13
SSBP4-201ENST00000270061 NUDT14O95848 222 aa22.13■■□□□ 1.13
SSBP4-201ENST00000270061 CH25HO95992 272 aa22.13■■□□□ 1.13
SSBP4-201ENST00000270061 MSX1P28360 303 aa22.13■■□□□ 1.13
SSBP4-201ENST00000270061 QPRTQ15274 297 aa22.13■■□□□ 1.13
SSBP4-201ENST00000270061 PRAMEF20Q5VT98 475 aa22.13■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms