RNA–Protein interactions for RNA: ENST00000265810.8

PDLIM2-201, Transcript of PDZ and LIM domain 2, humanhuman

TSL 1 (best) BASIC

Gene PDLIM2, Length 4,592 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-201ENST00000265810 IFNGR1P15260 489 aa13.2□□□□□ -0.3
PDLIM2-201ENST00000265810 HIST1H1CP16403 213 aaKnown RBP13.2□□□□□ -0.3
PDLIM2-201ENST00000265810 MAKP20794 623 aa13.2□□□□□ -0.3
PDLIM2-201ENST00000265810 FAUP35544 74 aaKnown RBP13.2□□□□□ -0.3
PDLIM2-201ENST00000265810 MVDP53602 400 aa13.2□□□□□ -0.3
PDLIM2-201ENST00000265810 ZNF658BQ4V348 819 aaPredicted RBP13.2□□□□□ -0.3
PDLIM2-201ENST00000265810 BCL2L15Q5TBC7 163 aa13.2□□□□□ -0.3
PDLIM2-201ENST00000265810 GLT8D1Q68CQ7 371 aa13.2□□□□□ -0.3
PDLIM2-201ENST00000265810 CNEP1R1Q8N9A8 125 aa13.2□□□□□ -0.3
PDLIM2-201ENST00000265810 MTCL1Q9Y4B5 1905 aaKnown RBP13.2□□□□□ -0.3
PDLIM2-201ENST00000265810 LNP1A1A4G5 178 aa13.2□□□□□ -0.3
PDLIM2-201ENST00000265810 ZC3H12DA2A288 527 aaKnown RBP13.2□□□□□ -0.3
PDLIM2-201ENST00000265810 RLN1P04808 185 aa13.2□□□□□ -0.3
PDLIM2-201ENST00000265810 ENPP1P22413 925 aa13.2□□□□□ -0.3
PDLIM2-201ENST00000265810 SLC35A2P78381 396 aa13.2□□□□□ -0.3
PDLIM2-201ENST00000265810 OCLNQ16625 522 aa13.2□□□□□ -0.3
PDLIM2-201ENST00000265810 GRAMD2AQ8IUY3 354 aa13.2□□□□□ -0.3
PDLIM2-201ENST00000265810 FAM26EQ8N5C1 309 aa13.2□□□□□ -0.3
PDLIM2-201ENST00000265810 OR13C3Q8NGS6 347 aa13.2□□□□□ -0.3
PDLIM2-201ENST00000265810 MUL1Q969V5 352 aa13.2□□□□□ -0.3
PDLIM2-201ENST00000265810 TMEM138Q9NPI0 162 aa13.2□□□□□ -0.3
PDLIM2-201ENST00000265810 INPP5EQ9NRR6 644 aa13.2□□□□□ -0.3
PDLIM2-201ENST00000265810 TCFL5Q9UL49 500 aa13.2□□□□□ -0.3
PDLIM2-201ENST00000265810 A0A0B4J2E0 115 aa13.19□□□□□ -0.3
PDLIM2-201ENST00000265810 A0A1B0GX12 115 aa13.19□□□□□ -0.3
PDLIM2-201ENST00000265810 CSTBP04080 98 aaKnown RBP13.19□□□□□ -0.3
PDLIM2-201ENST00000265810 UBE2NP61088 152 aaKnown RBP13.19□□□□□ -0.3
PDLIM2-201ENST00000265810 RPL18Q07020 188 aaKnown RBP13.19□□□□□ -0.3
PDLIM2-201ENST00000265810 FOXF1Q12946 379 aa13.19□□□□□ -0.3
PDLIM2-201ENST00000265810 CPEB4Q17RY0 729 aaKnown RBP eCLIP13.19□□□□□ -0.3
PDLIM2-201ENST00000265810 OR4D11Q8NGI4 311 aa13.19□□□□□ -0.3
PDLIM2-201ENST00000265810 TEAD3Q99594 435 aa13.19□□□□□ -0.3
PDLIM2-201ENST00000265810 PLA2G12AQ9BZM1 189 aa13.19□□□□□ -0.3
PDLIM2-201ENST00000265810 SLC19A3Q9BZV2 496 aa13.19□□□□□ -0.3
PDLIM2-201ENST00000265810 ELOVL3Q9HB03 270 aa13.19□□□□□ -0.3
PDLIM2-201ENST00000265810 MOKQ9UQ07 419 aa13.19□□□□□ -0.3
PDLIM2-201ENST00000265810 SHISA8B8ZZ34 492 aa13.19□□□□□ -0.3
PDLIM2-201ENST00000265810 ZNF208O43345 1280 aa13.19□□□□□ -0.3
PDLIM2-201ENST00000265810 PITPNAQ00169 270 aa13.19□□□□□ -0.3
PDLIM2-201ENST00000265810 MLLT11Q13015 90 aaPredicted RBP13.19□□□□□ -0.3
PDLIM2-201ENST00000265810 STPG1Q5TH74 334 aa13.19□□□□□ -0.3
PDLIM2-201ENST00000265810 FAM181AQ8N9Y4 354 aa13.19□□□□□ -0.3
PDLIM2-201ENST00000265810 PLA2G3Q9NZ20 509 aa13.19□□□□□ -0.3
PDLIM2-201ENST00000265810 SH3BGRL2Q9UJC5 107 aa13.19□□□□□ -0.3
PDLIM2-201ENST00000265810 POLHQ9Y253 713 aa13.19□□□□□ -0.3
PDLIM2-201ENST00000265810 A0A087WUJ7 227 aa13.19□□□□□ -0.3
PDLIM2-201ENST00000265810 APOC1P02654 83 aa13.19□□□□□ -0.3
PDLIM2-201ENST00000265810 FCER2P06734 321 aa13.19□□□□□ -0.3
PDLIM2-201ENST00000265810 CT45A8P0DMV1 189 aa13.19□□□□□ -0.3
PDLIM2-201ENST00000265810 CT45A9P0DMV2 189 aa13.19□□□□□ -0.3
PDLIM2-201ENST00000265810 CARTPTQ16568 116 aa13.19□□□□□ -0.3
PDLIM2-201ENST00000265810 CT45A2Q5DJT8 189 aa13.19□□□□□ -0.3
PDLIM2-201ENST00000265810 CEP78Q5JTW2 689 aa13.19□□□□□ -0.3
PDLIM2-201ENST00000265810 GDPGP1Q6ZNW5 385 aa13.19□□□□□ -0.3
PDLIM2-201ENST00000265810 SGCDQ92629 289 aa13.19□□□□□ -0.3
PDLIM2-201ENST00000265810 CMC2Q9NRP2 79 aa13.19□□□□□ -0.3
PDLIM2-201ENST00000265810 C20orf141Q9NUB4 165 aa13.19□□□□□ -0.3
PDLIM2-201ENST00000265810 MRPL39Q9NYK5 338 aaKnown RBP13.19□□□□□ -0.3
PDLIM2-201ENST00000265810 ZNF226Q9NYT6 803 aa13.19□□□□□ -0.3
PDLIM2-201ENST00000265810 EMC3Q9P0I2 261 aa13.19□□□□□ -0.3
PDLIM2-201ENST00000265810 DIMT1Q9UNQ2 313 aaKnown RBP13.19□□□□□ -0.3
PDLIM2-201ENST00000265810 ATE1O95260 518 aa13.18□□□□□ -0.3
PDLIM2-201ENST00000265810 OR2T7P0C7T2 308 aa13.18□□□□□ -0.3
PDLIM2-201ENST00000265810 CD79AP11912 226 aa13.18□□□□□ -0.3
PDLIM2-201ENST00000265810 FRKP42685 505 aaPredicted RBP13.18□□□□□ -0.3
PDLIM2-201ENST00000265810 ACSM3Q53FZ2 586 aa13.18□□□□□ -0.3
PDLIM2-201ENST00000265810 TMPPEQ6ZT21 453 aa13.18□□□□□ -0.3
PDLIM2-201ENST00000265810 OR2T27Q8NH04 317 aa13.18□□□□□ -0.3
PDLIM2-201ENST00000265810 ENKD1Q9H0I2 346 aa13.18□□□□□ -0.3
PDLIM2-201ENST00000265810 FKRPQ9H9S5 495 aa13.18□□□□□ -0.3
PDLIM2-201ENST00000265810 WIF1Q9Y5W5 379 aa13.18□□□□□ -0.3
PDLIM2-201ENST00000265810 ALG1L2C9J202 215 aa13.18□□□□□ -0.3
PDLIM2-201ENST00000265810 ZNF432O94892 652 aa13.18□□□□□ -0.3
PDLIM2-201ENST00000265810 LCATP04180 440 aa13.18□□□□□ -0.3
PDLIM2-201ENST00000265810 HMGA2P52926 109 aa13.18□□□□□ -0.3
PDLIM2-201ENST00000265810 RPL27P61353 136 aaKnown RBP13.18□□□□□ -0.3
PDLIM2-201ENST00000265810 ARFRP1Q13795 201 aa13.18□□□□□ -0.3
PDLIM2-201ENST00000265810 ZNF141Q15928 474 aa13.18□□□□□ -0.3
PDLIM2-201ENST00000265810 ACKR1Q16570 336 aa13.18□□□□□ -0.3
PDLIM2-201ENST00000265810 ZADH2Q8N4Q0 377 aa13.18□□□□□ -0.3
PDLIM2-201ENST00000265810 BRIX1Q8TDN6 353 aaKnown RBP13.18□□□□□ -0.3
PDLIM2-201ENST00000265810 C3orf49Q96BT1 292 aa13.18□□□□□ -0.3
PDLIM2-201ENST00000265810 GNRHR2Q96P88 292 aa13.18□□□□□ -0.3
PDLIM2-201ENST00000265810 RBM7Q9Y580 266 aaKnown RBP13.18□□□□□ -0.3
PDLIM2-201ENST00000265810 RAB3BP20337 219 aa13.18□□□□□ -0.3
PDLIM2-201ENST00000265810 SELENBP1Q13228 472 aa13.18□□□□□ -0.3
PDLIM2-201ENST00000265810 ACER2Q5QJU3 275 aa13.18□□□□□ -0.3
PDLIM2-201ENST00000265810 HEPHL1Q6MZM0 1159 aa13.18□□□□□ -0.3
PDLIM2-201ENST00000265810 SLC43A2Q8N370 569 aa13.18□□□□□ -0.3
PDLIM2-201ENST00000265810 LRRC18Q8N456 261 aa13.18□□□□□ -0.3
PDLIM2-201ENST00000265810 MRGPRX4Q96LA9 322 aa13.18□□□□□ -0.3
PDLIM2-201ENST00000265810 DEFB127Q9H1M4 99 aa13.18□□□□□ -0.3
PDLIM2-201ENST00000265810 SMURF1Q9HCE7 757 aa13.18□□□□□ -0.3
PDLIM2-201ENST00000265810 EXTL2Q9UBQ6 330 aa13.18□□□□□ -0.3
PDLIM2-201ENST00000265810 ZNF346Q9UL40 294 aaKnown RBP13.18□□□□□ -0.3
PDLIM2-201ENST00000265810 METTL21EPA6NDL7 271 aa13.18□□□□□ -0.3
PDLIM2-201ENST00000265810 KLK10O43240 276 aa13.18□□□□□ -0.3
PDLIM2-201ENST00000265810 SYT7O43581 403 aa13.18□□□□□ -0.3
PDLIM2-201ENST00000265810 FBXO45P0C2W1 286 aa13.18□□□□□ -0.3
PDLIM2-201ENST00000265810 MC2RQ01718 297 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms