RNA–Protein interactions for RNA: ENST00000265619.6

VAPB-201, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 3,596 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-201ENST00000265619 C3orf33Q6P1S2 294 aa8.06□□□□□ -1.12
VAPB-201ENST00000265619 C1orf94Q6P1W5 598 aa8.06□□□□□ -1.12
VAPB-201ENST00000265619 FCRLAQ7L513 359 aa8.06□□□□□ -1.12
VAPB-201ENST00000265619 DPPA2Q7Z7J5 298 aa8.06□□□□□ -1.12
VAPB-201ENST00000265619 TMEM150AQ86TG1 271 aa8.06□□□□□ -1.12
VAPB-201ENST00000265619 ZNF671Q8TAW3 534 aa8.06□□□□□ -1.12
VAPB-201ENST00000265619 CMTM3Q96MX0 182 aa8.06□□□□□ -1.12
VAPB-201ENST00000265619 CNTNAP3BQ96NU0 1288 aa8.06□□□□□ -1.12
VAPB-201ENST00000265619 NRIP2Q9BQI9 281 aa8.06□□□□□ -1.12
VAPB-201ENST00000265619 PPP1R14DQ9NXH3 145 aa8.06□□□□□ -1.12
VAPB-201ENST00000265619 RCC2Q9P258 522 aaKnown RBP8.06□□□□□ -1.12
VAPB-201ENST00000265619 CD84Q9UIB8 345 aa8.06□□□□□ -1.12
VAPB-201ENST00000265619 CA14Q9ULX7 337 aa8.06□□□□□ -1.12
VAPB-201ENST00000265619 PLEKHA6Q9Y2H5 1048 aa8.06□□□□□ -1.12
VAPB-201ENST00000265619 LINC01553A4QN01 128 aa8.06□□□□□ -1.12
VAPB-201ENST00000265619 BTBD17A6NE02 478 aa8.06□□□□□ -1.12
VAPB-201ENST00000265619 J3QLW9 94 aa8.06□□□□□ -1.12
VAPB-201ENST00000265619 KIAA0355O15063 1070 aa8.06□□□□□ -1.12
VAPB-201ENST00000265619 AGPAT2O15120 278 aa8.06□□□□□ -1.12
VAPB-201ENST00000265619 KRT33AO76009 404 aa8.06□□□□□ -1.12
VAPB-201ENST00000265619 ADH1CP00326 375 aa8.06□□□□□ -1.12
VAPB-201ENST00000265619 IL5P05113 134 aa8.06□□□□□ -1.12
VAPB-201ENST00000265619 SERPIND1P05546 499 aa8.06□□□□□ -1.12
VAPB-201ENST00000265619 CLUP10909 449 aa8.06□□□□□ -1.12
VAPB-201ENST00000265619 LIPCP11150 499 aa8.06□□□□□ -1.12
VAPB-201ENST00000265619 ZNF19P17023 458 aa8.06□□□□□ -1.12
VAPB-201ENST00000265619 CR2P20023 1033 aa8.06□□□□□ -1.12
VAPB-201ENST00000265619 MAT2AP31153 395 aaKnown RBP8.06□□□□□ -1.12
VAPB-201ENST00000265619 WASP42768 502 aa8.06□□□□□ -1.12
VAPB-201ENST00000265619 GPR4P46093 362 aa8.06□□□□□ -1.12
VAPB-201ENST00000265619 RNF144AP50876 292 aaPredicted RBP8.06□□□□□ -1.12
VAPB-201ENST00000265619 LSM6P62312 80 aaKnown RBP8.06□□□□□ -1.12
VAPB-201ENST00000265619 CBFBQ13951 182 aa8.06□□□□□ -1.12
VAPB-201ENST00000265619 ERV3-1Q14264 604 aa8.06□□□□□ -1.12
VAPB-201ENST00000265619 ZNF813Q6ZN06 617 aa8.06□□□□□ -1.12
VAPB-201ENST00000265619 RFLNAQ6ZTI6 216 aa8.06□□□□□ -1.12
VAPB-201ENST00000265619 PGAP1Q75T13 922 aa8.06□□□□□ -1.12
VAPB-201ENST00000265619 ZC3HAV1Q7Z2W4 902 aaKnown RBP8.06□□□□□ -1.12
VAPB-201ENST00000265619 DNAAF1Q8NEP3 725 aa8.06□□□□□ -1.12
VAPB-201ENST00000265619 OR10H4Q8NGA5 316 aa8.06□□□□□ -1.12
VAPB-201ENST00000265619 C2orf15Q8WU43 125 aaKnown RBP8.06□□□□□ -1.12
VAPB-201ENST00000265619 TNFAIP8L1Q8WVP5 186 aa8.06□□□□□ -1.12
VAPB-201ENST00000265619 GHSRQ92847 366 aa8.06□□□□□ -1.12
VAPB-201ENST00000265619 DVL3Q92997 716 aaPredicted RBP8.06□□□□□ -1.12
VAPB-201ENST00000265619 PPCDCQ96CD2 204 aa8.06□□□□□ -1.12
VAPB-201ENST00000265619 ELF4Q99607 663 aaPredicted RBP8.06□□□□□ -1.12
VAPB-201ENST00000265619 TOLLIPQ9H0E2 274 aa8.06□□□□□ -1.12
VAPB-201ENST00000265619 ZBP1Q9H171 429 aa8.06□□□□□ -1.12
VAPB-201ENST00000265619 TSPAN10Q9H1Z9 355 aaPredicted RBP8.06□□□□□ -1.12
VAPB-201ENST00000265619 TCF7L1Q9HCS4 588 aa8.06□□□□□ -1.12
VAPB-201ENST00000265619 FBXL4Q9UKA2 621 aa8.06□□□□□ -1.12
VAPB-201ENST00000265619 A6NJY4 79 aa8.06□□□□□ -1.12
VAPB-201ENST00000265619 PHYHO14832 338 aa8.06□□□□□ -1.12
VAPB-201ENST00000265619 SOX15O60248 233 aa8.06□□□□□ -1.12
VAPB-201ENST00000265619 CDH4P55283 916 aa8.06□□□□□ -1.12
VAPB-201ENST00000265619 RAC1P63000 192 aa8.06□□□□□ -1.12
VAPB-201ENST00000265619 GPM6BQ13491 265 aa8.06□□□□□ -1.12
VAPB-201ENST00000265619 SHHQ15465 462 aa8.06□□□□□ -1.12
VAPB-201ENST00000265619 ENTPD8Q5MY95 495 aa8.06□□□□□ -1.12
VAPB-201ENST00000265619 PIP5KL1Q5T9C9 394 aa8.06□□□□□ -1.12
VAPB-201ENST00000265619 ANXA8L1Q5VT79 327 aa8.06□□□□□ -1.12
VAPB-201ENST00000265619 ADAM5Q6NVV9 412 aa8.06□□□□□ -1.12
VAPB-201ENST00000265619 REC114Q7Z4M0 266 aa8.06□□□□□ -1.12
VAPB-201ENST00000265619 KCNRGQ8N5I3 272 aa8.06□□□□□ -1.12
VAPB-201ENST00000265619 C4orf36Q96KX1 117 aa8.06□□□□□ -1.12
VAPB-201ENST00000265619 LURAP1Q96LR2 239 aa8.06□□□□□ -1.12
VAPB-201ENST00000265619 MICU1Q9BPX6 476 aa8.06□□□□□ -1.12
VAPB-201ENST00000265619 SEC11CQ9BY50 192 aa8.06□□□□□ -1.12
VAPB-201ENST00000265619 TMPRSS5Q9H3S3 457 aa8.06□□□□□ -1.12
VAPB-201ENST00000265619 SEMA6CQ9H3T2 930 aa8.06□□□□□ -1.12
VAPB-201ENST00000265619 GPN1Q9HCN4 374 aaPredicted RBP8.06□□□□□ -1.12
VAPB-201ENST00000265619 SCN8AQ9UQD0 1980 aa8.06□□□□□ -1.12
VAPB-201ENST00000265619 IGLV3-10A0A075B6K4 115 aa8.05□□□□□ -1.12
VAPB-201ENST00000265619 EMC8O43402 210 aa8.05□□□□□ -1.12
VAPB-201ENST00000265619 BCL2L11O43521 198 aa8.05□□□□□ -1.12
VAPB-201ENST00000265619 ALOX12BO75342 701 aa8.05□□□□□ -1.12
VAPB-201ENST00000265619 ARG1P05089 322 aa8.05□□□□□ -1.12
VAPB-201ENST00000265619 RBP2P50120 134 aa8.05□□□□□ -1.12
VAPB-201ENST00000265619 RAB2AP61019 212 aa8.05□□□□□ -1.12
VAPB-201ENST00000265619 GUCA2AQ02747 115 aa8.05□□□□□ -1.12
VAPB-201ENST00000265619 GFI1BQ5VTD9 330 aa8.05□□□□□ -1.12
VAPB-201ENST00000265619 SZRD1Q7Z422 152 aa8.05□□□□□ -1.12
VAPB-201ENST00000265619 CAMKMTQ7Z624 323 aa8.05□□□□□ -1.12
VAPB-201ENST00000265619 MRGPREQ86SM8 312 aa8.05□□□□□ -1.12
VAPB-201ENST00000265619 SEMA6DQ8NFY4 1073 aa8.05□□□□□ -1.12
VAPB-201ENST00000265619 OR14A2Q96R54 314 aa8.05□□□□□ -1.12
VAPB-201ENST00000265619 UTP23Q9BRU9 249 aaKnown RBP8.05□□□□□ -1.12
VAPB-201ENST00000265619 FNDC11Q9BVV2 318 aa8.05□□□□□ -1.12
VAPB-201ENST00000265619 KLF16Q9BXK1 252 aaPredicted RBP8.05□□□□□ -1.12
VAPB-201ENST00000265619 PLEKHA1Q9HB21 404 aa8.05□□□□□ -1.12
VAPB-201ENST00000265619 IL26Q9NPH9 171 aa8.05□□□□□ -1.12
VAPB-201ENST00000265619 SH2B3Q9UQQ2 575 aa8.05□□□□□ -1.12
VAPB-201ENST00000265619 CTDSPLO15194 276 aa8.05□□□□□ -1.12
VAPB-201ENST00000265619 ASGR2P07307 311 aa8.05□□□□□ -1.12
VAPB-201ENST00000265619 FURINP09958 794 aa8.05□□□□□ -1.12
VAPB-201ENST00000265619 SFTA3P0C7M3 94 aa8.05□□□□□ -1.12
VAPB-201ENST00000265619 ATP1B3P54709 279 aa8.05□□□□□ -1.12
VAPB-201ENST00000265619 PDZD11Q5EBL8 140 aa8.05□□□□□ -1.12
VAPB-201ENST00000265619 LY6G5CQ5SRR4 150 aa8.05□□□□□ -1.12
VAPB-201ENST00000265619 OLFML2AQ68BL7 652 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms