RNA–Protein interactions for RNA: ENST00000263694.8

SNRNP40-201, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP40, Length 1,597 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-201ENST00000263694 BHLHE40O14503 412 aa8.72□□□□□ -1.01
SNRNP40-201ENST00000263694 LCE2BO14633 110 aa8.72□□□□□ -1.01
SNRNP40-201ENST00000263694 IMPA2O14732 288 aa8.72□□□□□ -1.01
SNRNP40-201ENST00000263694 RNF13O43567 381 aa8.72□□□□□ -1.01
SNRNP40-201ENST00000263694 DENRO43583 198 aaKnown RBP8.72□□□□□ -1.01
SNRNP40-201ENST00000263694 NDUFB2O95178 105 aa8.72□□□□□ -1.01
SNRNP40-201ENST00000263694 RCBTB2O95199 551 aa8.72□□□□□ -1.01
SNRNP40-201ENST00000263694 PMS2P2O95744 297 aa8.72□□□□□ -1.01
SNRNP40-201ENST00000263694 MT-ATP6P00846 226 aa8.72□□□□□ -1.01
SNRNP40-201ENST00000263694 ENPP1P22413 925 aa8.72□□□□□ -1.01
SNRNP40-201ENST00000263694 AHCYP23526 432 aa8.72□□□□□ -1.01
SNRNP40-201ENST00000263694 GTF2E2P29084 291 aaKnown RBP8.72□□□□□ -1.01
SNRNP40-201ENST00000263694 RPL4P36578 427 aaKnown RBP8.72□□□□□ -1.01
SNRNP40-201ENST00000263694 CLK1P49759 484 aaKnown RBP8.72□□□□□ -1.01
SNRNP40-201ENST00000263694 P2RY4P51582 365 aa8.72□□□□□ -1.01
SNRNP40-201ENST00000263694 CARD18P57730 90 aa8.72□□□□□ -1.01
SNRNP40-201ENST00000263694 CTXN1P60606 82 aa8.72□□□□□ -1.01
SNRNP40-201ENST00000263694 ALG10Q5BKT4 473 aa8.72□□□□□ -1.01
SNRNP40-201ENST00000263694 ZNF691Q5VV52 312 aa8.72□□□□□ -1.01
SNRNP40-201ENST00000263694 SLX4IPQ5VYV7 408 aa8.72□□□□□ -1.01
SNRNP40-201ENST00000263694 TTC23Q5W5X9 447 aa8.72□□□□□ -1.01
SNRNP40-201ENST00000263694 VASNQ6EMK4 673 aa8.72□□□□□ -1.01
SNRNP40-201ENST00000263694 RPUSD3Q6P087 351 aaKnown RBP8.72□□□□□ -1.01
SNRNP40-201ENST00000263694 H1FNTQ75WM6 255 aaPredicted RBP8.72□□□□□ -1.01
SNRNP40-201ENST00000263694 BCDIN3DQ7Z5W3 292 aaKnown RBP8.72□□□□□ -1.01
SNRNP40-201ENST00000263694 WDFY1Q8IWB7 410 aa8.72□□□□□ -1.01
SNRNP40-201ENST00000263694 GHDCQ8N2G8 530 aa8.72□□□□□ -1.01
SNRNP40-201ENST00000263694 OR10D3Q8NH80 312 aa8.72□□□□□ -1.01
SNRNP40-201ENST00000263694 OR2V1Q8NHB1 315 aa8.72□□□□□ -1.01
SNRNP40-201ENST00000263694 FAM81AQ8TBF8 368 aa8.72□□□□□ -1.01
SNRNP40-201ENST00000263694 ROBO4Q8WZ75 1007 aa8.72□□□□□ -1.01
SNRNP40-201ENST00000263694 PNPLA2Q96AD5 504 aa8.72□□□□□ -1.01
SNRNP40-201ENST00000263694 MIB2Q96AX9 1013 aa8.72□□□□□ -1.01
SNRNP40-201ENST00000263694 ERMAPQ96PL5 475 aaPredicted RBP8.72□□□□□ -1.01
SNRNP40-201ENST00000263694 IL4I1Q96RQ9 567 aa8.72□□□□□ -1.01
SNRNP40-201ENST00000263694 PITX2Q99697 317 aa8.72□□□□□ -1.01
SNRNP40-201ENST00000263694 CHST11Q9NPF2 352 aa8.72□□□□□ -1.01
SNRNP40-201ENST00000263694 ALKBH4Q9NXW9 302 aa8.72□□□□□ -1.01
SNRNP40-201ENST00000263694 MRPL39Q9NYK5 338 aaKnown RBP8.72□□□□□ -1.01
SNRNP40-201ENST00000263694 ZNF226Q9NYT6 803 aa8.72□□□□□ -1.01
SNRNP40-201ENST00000263694 KLHL13Q9P2N7 655 aa8.72□□□□□ -1.01
SNRNP40-201ENST00000263694 RNF6Q9Y252 685 aa8.72□□□□□ -1.01
SNRNP40-201ENST00000263694 HIF3AQ9Y2N7 669 aa8.72□□□□□ -1.01
SNRNP40-201ENST00000263694 HDGFL3Q9Y3E1 203 aa8.72□□□□□ -1.01
SNRNP40-201ENST00000263694 IER3IP1Q9Y5U9 82 aa8.72□□□□□ -1.01
SNRNP40-201ENST00000263694 SPTA1P02549 2419 aa8.72□□□□□ -1.01
SNRNP40-201ENST00000263694 NBEAQ8NFP9 2946 aa8.72□□□□□ -1.01
SNRNP40-201ENST00000263694 A0A1B0GTH9 108 aa8.71□□□□□ -1.02
SNRNP40-201ENST00000263694 HTR3EA5X5Y0 456 aa8.71□□□□□ -1.02
SNRNP40-201ENST00000263694 KDM4EB2RXH2 506 aaPredicted RBP8.71□□□□□ -1.02
SNRNP40-201ENST00000263694 NPIPA2E9PIF3 369 aa8.71□□□□□ -1.02
SNRNP40-201ENST00000263694 NPIPA3F8WFD2 350 aa8.71□□□□□ -1.02
SNRNP40-201ENST00000263694 PRKYO43930 277 aa8.71□□□□□ -1.02
SNRNP40-201ENST00000263694 IGHG3P01860 377 aa8.71□□□□□ -1.02
SNRNP40-201ENST00000263694 TSPAN19P0C672 248 aa8.71□□□□□ -1.02
SNRNP40-201ENST00000263694 ZNF708P17019 499 aa8.71□□□□□ -1.02
SNRNP40-201ENST00000263694 MYF6P23409 242 aa8.71□□□□□ -1.02
SNRNP40-201ENST00000263694 FKBP2P26885 142 aaKnown RBP8.71□□□□□ -1.02
SNRNP40-201ENST00000263694 SLC35A1P78382 337 aa8.71□□□□□ -1.02
SNRNP40-201ENST00000263694 MYBPC1Q00872 1141 aa8.71□□□□□ -1.02
SNRNP40-201ENST00000263694 IL5RAQ01344 420 aa8.71□□□□□ -1.02
SNRNP40-201ENST00000263694 TOP3AQ13472 1001 aaPredicted RBP8.71□□□□□ -1.02
SNRNP40-201ENST00000263694 KEAP1Q14145 624 aa8.71□□□□□ -1.02
SNRNP40-201ENST00000263694 SGCBQ16585 318 aa8.71□□□□□ -1.02
SNRNP40-201ENST00000263694 PGGHGQ32M88 737 aa8.71□□□□□ -1.02
SNRNP40-201ENST00000263694 C12orf73Q69YU5 71 aa8.71□□□□□ -1.02
SNRNP40-201ENST00000263694 SLC27A4Q6P1M0 643 aa8.71□□□□□ -1.02
SNRNP40-201ENST00000263694 PCSK4Q6UW60 755 aa8.71□□□□□ -1.02
SNRNP40-201ENST00000263694 ESPNLQ6ZVH7 1005 aa8.71□□□□□ -1.02
SNRNP40-201ENST00000263694 ENTHD1Q8IYW4 607 aa8.71□□□□□ -1.02
SNRNP40-201ENST00000263694 CLDN22Q8N7P3 220 aa8.71□□□□□ -1.02
SNRNP40-201ENST00000263694 TEX19Q8NA77 164 aa8.71□□□□□ -1.02
SNRNP40-201ENST00000263694 OR52L1Q8NGH7 329 aa8.71□□□□□ -1.02
SNRNP40-201ENST00000263694 OR5M9Q8NGP3 310 aa8.71□□□□□ -1.02
SNRNP40-201ENST00000263694 OR6S1Q8NH40 331 aa8.71□□□□□ -1.02
SNRNP40-201ENST00000263694 CNIH3Q8TBE1 160 aa8.71□□□□□ -1.02
SNRNP40-201ENST00000263694 ZNF775Q96BV0 537 aaPredicted RBP8.71□□□□□ -1.02
SNRNP40-201ENST00000263694 RASD2Q96D21 266 aa8.71□□□□□ -1.02
SNRNP40-201ENST00000263694 DTNBP1Q96EV8 351 aa8.71□□□□□ -1.02
SNRNP40-201ENST00000263694 WDYHV1Q96HA8 205 aa8.71□□□□□ -1.02
SNRNP40-201ENST00000263694 Q96M85 177 aa8.71□□□□□ -1.02
SNRNP40-201ENST00000263694 KATNB1Q9BVA0 655 aa8.71□□□□□ -1.02
SNRNP40-201ENST00000263694 ANKRD60Q9BZ19 345 aa8.71□□□□□ -1.02
SNRNP40-201ENST00000263694 SLC25A19Q9HC21 320 aa8.71□□□□□ -1.02
SNRNP40-201ENST00000263694 ENOPH1Q9UHY7 261 aa8.71□□□□□ -1.02
SNRNP40-201ENST00000263694 TUBD1Q9UJT1 453 aa8.71□□□□□ -1.02
SNRNP40-201ENST00000263694 CAMK2AQ9UQM7 478 aa8.71□□□□□ -1.02
SNRNP40-201ENST00000263694 TRAPPC4Q9Y296 219 aa8.71□□□□□ -1.02
SNRNP40-201ENST00000263694 GPR52Q9Y2T5 361 aa8.71□□□□□ -1.02
SNRNP40-201ENST00000263694 CACNA1BQ00975 2339 aa8.71□□□□□ -1.02
SNRNP40-201ENST00000263694 ZGRF1Q86YA3 2104 aa8.71□□□□□ -1.02
SNRNP40-201ENST00000263694 GJE1A6NN92 205 aa8.7□□□□□ -1.02
SNRNP40-201ENST00000263694 LINC01387J3KSC0 135 aa8.7□□□□□ -1.02
SNRNP40-201ENST00000263694 SMAD9O15198 467 aaKnown RBP8.7□□□□□ -1.02
SNRNP40-201ENST00000263694 OR6A2O95222 327 aa8.7□□□□□ -1.02
SNRNP40-201ENST00000263694 ACTL6AO96019 429 aa8.7□□□□□ -1.02
SNRNP40-201ENST00000263694 ACADSP16219 412 aa8.7□□□□□ -1.02
SNRNP40-201ENST00000263694 SLC6A6P31641 620 aa8.7□□□□□ -1.02
SNRNP40-201ENST00000263694 SMSP52788 366 aa8.7□□□□□ -1.02
SNRNP40-201ENST00000263694 PRPS1P60891 318 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms