RNA–Protein interactions for RNA: ENST00000261037.7

COL8A1-201, Transcript of collagen type VIII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL8A1, Length 5,705 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-201ENST00000261037 SULT1B1O43704 296 aa11.21□□□□□ -0.61
COL8A1-201ENST00000261037 DPM1O60762 260 aa11.21□□□□□ -0.61
COL8A1-201ENST00000261037 PMP2P02689 132 aa11.21□□□□□ -0.61
COL8A1-201ENST00000261037 MPEG1Q2M385 716 aa11.21□□□□□ -0.61
COL8A1-201ENST00000261037 OR13H1Q8NG92 308 aa11.21□□□□□ -0.61
COL8A1-201ENST00000261037 PFN4Q8NHR9 129 aa11.21□□□□□ -0.61
COL8A1-201ENST00000261037 ADAMTS14Q8WXS8 1223 aa11.21□□□□□ -0.61
COL8A1-201ENST00000261037 SGK3Q96BR1 496 aa11.21□□□□□ -0.61
COL8A1-201ENST00000261037 SLC25A31Q9H0C2 315 aa11.21□□□□□ -0.61
COL8A1-201ENST00000261037 TMX2-CTNND1H3BSU7 103 aa11.21□□□□□ -0.62
COL8A1-201ENST00000261037 ARHGAP33O14559 1287 aa11.21□□□□□ -0.62
COL8A1-201ENST00000261037 HSD17B6O14756 317 aa11.21□□□□□ -0.62
COL8A1-201ENST00000261037 HCRTR1O43613 425 aa11.21□□□□□ -0.62
COL8A1-201ENST00000261037 CARD18P57730 90 aa11.21□□□□□ -0.62
COL8A1-201ENST00000261037 SHEQ5VZ18 495 aa11.21□□□□□ -0.62
COL8A1-201ENST00000261037 PM20D2Q8IYS1 436 aa11.21□□□□□ -0.62
COL8A1-201ENST00000261037 SECTM1Q8WVN6 248 aa11.21□□□□□ -0.62
COL8A1-201ENST00000261037 DVL3Q92997 716 aaPredicted RBP11.21□□□□□ -0.62
COL8A1-201ENST00000261037 RASD2Q96D21 266 aa11.21□□□□□ -0.62
COL8A1-201ENST00000261037 C1orf198Q9H425 327 aa11.21□□□□□ -0.62
COL8A1-201ENST00000261037 ARNT2Q9HBZ2 717 aa11.21□□□□□ -0.62
COL8A1-201ENST00000261037 OSGIN1Q9UJX0 560 aa11.21□□□□□ -0.62
COL8A1-201ENST00000261037 MRPS28Q9Y2Q9 187 aaKnown RBP11.21□□□□□ -0.62
COL8A1-201ENST00000261037 SELENOFO60613 162 aa11.21□□□□□ -0.62
COL8A1-201ENST00000261037 CSO75390 466 aaKnown RBP11.21□□□□□ -0.62
COL8A1-201ENST00000261037 SHC1P29353 583 aa11.21□□□□□ -0.62
COL8A1-201ENST00000261037 MRPS10P82664 201 aaKnown RBP11.21□□□□□ -0.62
COL8A1-201ENST00000261037 PTCRAQ6ISU1 281 aaPredicted RBP11.21□□□□□ -0.62
COL8A1-201ENST00000261037 PCNPQ8WW12 178 aaKnown RBP11.21□□□□□ -0.62
COL8A1-201ENST00000261037 COL18A1P39060 1754 aa11.21□□□□□ -0.62
COL8A1-201ENST00000261037 A0A1W2PS29 197 aa11.2□□□□□ -0.62
COL8A1-201ENST00000261037 ALPLP05186 524 aa11.2□□□□□ -0.62
COL8A1-201ENST00000261037 ENPP1P22413 925 aa11.2□□□□□ -0.62
COL8A1-201ENST00000261037 KCNAB1Q14722 419 aa11.2□□□□□ -0.62
COL8A1-201ENST00000261037 GGTA1PQ4G0N0 100 aa11.2□□□□□ -0.62
COL8A1-201ENST00000261037 SLCO4C1Q6ZQN7 724 aa11.2□□□□□ -0.62
COL8A1-201ENST00000261037 MUL1Q969V5 352 aa11.2□□□□□ -0.62
COL8A1-201ENST00000261037 ZNF419Q96HQ0 510 aaPredicted RBP11.2□□□□□ -0.62
COL8A1-201ENST00000261037 ZBP1Q9H171 429 aa11.2□□□□□ -0.62
COL8A1-201ENST00000261037 RANGRFQ9HD47 186 aaPredicted RBP11.2□□□□□ -0.62
COL8A1-201ENST00000261037 DECR2Q9NUI1 292 aa11.2□□□□□ -0.62
COL8A1-201ENST00000261037 SIDT1Q9NXL6 827 aaKnown RBP11.2□□□□□ -0.62
COL8A1-201ENST00000261037 POLR2IP36954 125 aaKnown RBP11.2□□□□□ -0.62
COL8A1-201ENST00000261037 HBMQ6B0K9 141 aa11.2□□□□□ -0.62
COL8A1-201ENST00000261037 DRAXINQ8NBI3 349 aaPredicted RBP11.2□□□□□ -0.62
COL8A1-201ENST00000261037 PIGTQ969N2 578 aa11.2□□□□□ -0.62
COL8A1-201ENST00000261037 NXPE3Q969Y0 559 aa11.2□□□□□ -0.62
COL8A1-201ENST00000261037 NRSN2Q9GZP1 204 aa11.2□□□□□ -0.62
COL8A1-201ENST00000261037 MCOLN1Q9GZU1 580 aa11.2□□□□□ -0.62
COL8A1-201ENST00000261037 GLIPR2Q9H4G4 154 aa11.2□□□□□ -0.62
COL8A1-201ENST00000261037 CDCP1Q9H5V8 836 aa11.2□□□□□ -0.62
COL8A1-201ENST00000261037 TUBG2Q9NRH3 451 aa11.2□□□□□ -0.62
COL8A1-201ENST00000261037 GNG13Q9P2W3 67 aa11.2□□□□□ -0.62
COL8A1-201ENST00000261037 ADAM29Q9UKF5 820 aa11.2□□□□□ -0.62
COL8A1-201ENST00000261037 K7ESM1 405 aa11.2□□□□□ -0.62
COL8A1-201ENST00000261037 DDAH2O95865 285 aa11.2□□□□□ -0.62
COL8A1-201ENST00000261037 IGHV3-9P01782 118 aa11.2□□□□□ -0.62
COL8A1-201ENST00000261037 F11P03951 625 aa11.2□□□□□ -0.62
COL8A1-201ENST00000261037 CHRNB1P11230 501 aa11.2□□□□□ -0.62
COL8A1-201ENST00000261037 DPP4P27487 766 aa11.2□□□□□ -0.62
COL8A1-201ENST00000261037 HTR2CP28335 458 aa11.2□□□□□ -0.62
COL8A1-201ENST00000261037 TAS2R46P59540 309 aa11.2□□□□□ -0.62
COL8A1-201ENST00000261037 GDF7Q7Z4P5 450 aa11.2□□□□□ -0.62
COL8A1-201ENST00000261037 RETREG3Q86VR2 466 aa11.2□□□□□ -0.62
COL8A1-201ENST00000261037 NUDT8Q8WV74 236 aa11.2□□□□□ -0.62
COL8A1-201ENST00000261037 OCSTAMPQ9BR26 566 aa11.2□□□□□ -0.62
COL8A1-201ENST00000261037 TK1P04183 234 aa11.2□□□□□ -0.62
COL8A1-201ENST00000261037 SEMA3BQ13214 749 aa11.2□□□□□ -0.62
COL8A1-201ENST00000261037 MLF2Q15773 248 aaPredicted RBP11.2□□□□□ -0.62
COL8A1-201ENST00000261037 TAZQ16635 292 aa11.2□□□□□ -0.62
COL8A1-201ENST00000261037 TATDN3Q17R31 274 aa11.2□□□□□ -0.62
COL8A1-201ENST00000261037 ANKLE1Q8NAG6 615 aa11.2□□□□□ -0.62
COL8A1-201ENST00000261037 SEC22AQ96IW7 307 aa11.2□□□□□ -0.62
COL8A1-201ENST00000261037 MS4A8Q9BY19 250 aa11.2□□□□□ -0.62
COL8A1-201ENST00000261037 MBNL1Q9NR56 388 aaKnown RBP11.2□□□□□ -0.62
COL8A1-201ENST00000261037 C19orf12Q9NSK7 152 aa11.2□□□□□ -0.62
COL8A1-201ENST00000261037 HS3ST2Q9Y278 367 aa11.2□□□□□ -0.62
COL8A1-201ENST00000261037 ZNF749O43361 778 aa11.2□□□□□ -0.62
COL8A1-201ENST00000261037 PRAMEF4O60810 478 aa11.2□□□□□ -0.62
COL8A1-201ENST00000261037 CD63P08962 238 aa11.2□□□□□ -0.62
COL8A1-201ENST00000261037 TGM4P49221 684 aa11.2□□□□□ -0.62
COL8A1-201ENST00000261037 YPEL5P62699 121 aa11.2□□□□□ -0.62
COL8A1-201ENST00000261037 BAXQ07812 192 aa11.2□□□□□ -0.62
COL8A1-201ENST00000261037 C14orf28Q4W4Y0 310 aa11.2□□□□□ -0.62
COL8A1-201ENST00000261037 OR11L1Q8NGX0 322 aa11.2□□□□□ -0.62
COL8A1-201ENST00000261037 RAB3CQ96E17 227 aa11.2□□□□□ -0.62
COL8A1-201ENST00000261037 PDXPQ96GD0 296 aa11.2□□□□□ -0.62
COL8A1-201ENST00000261037 LCORQ96JN0 433 aaPredicted RBP11.2□□□□□ -0.62
COL8A1-201ENST00000261037 ZIC5Q96T25 663 aa11.2□□□□□ -0.62
COL8A1-201ENST00000261037 NHSQ6T4R5 1651 aa11.2□□□□□ -0.62
COL8A1-201ENST00000261037 TRAV36DV7A0A075B6V5 113 aa11.19□□□□□ -0.62
COL8A1-201ENST00000261037 C17orf113A0A1B0GUU1 675 aa11.19□□□□□ -0.62
COL8A1-201ENST00000261037 C7orf72A4D263 438 aa11.19□□□□□ -0.62
COL8A1-201ENST00000261037 H0YIV9 168 aa11.19□□□□□ -0.62
COL8A1-201ENST00000261037 SMLR1H3BR10 107 aa11.19□□□□□ -0.62
COL8A1-201ENST00000261037 M6PRP20645 277 aa11.19□□□□□ -0.62
COL8A1-201ENST00000261037 AFF3P51826 1226 aaKnown RBP11.19□□□□□ -0.62
COL8A1-201ENST00000261037 SLC35A1P78382 337 aa11.19□□□□□ -0.62
COL8A1-201ENST00000261037 FXNQ16595 210 aa11.19□□□□□ -0.62
COL8A1-201ENST00000261037 HSF5Q4G112 596 aaPredicted RBP11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms